RNA–Protein interactions for RNA: ENST00000460957.1

GGA1-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 790 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-216ENST00000460957 KCNJ15Q99712 375 aa13.53□□□□□ -0.24
GGA1-216ENST00000460957 C1QTNF5Q9BXJ0 243 aa13.53□□□□□ -0.24
GGA1-216ENST00000460957 SP140LQ9H930 580 aa13.53□□□□□ -0.24
GGA1-216ENST00000460957 PNRC2Q9NPJ4 139 aaKnown RBP13.53□□□□□ -0.24
GGA1-216ENST00000460957 TREM2Q9NZC2 230 aa13.53□□□□□ -0.24
GGA1-216ENST00000460957 PRODHO43272 600 aa13.52□□□□□ -0.25
GGA1-216ENST00000460957 TBX1O43435 398 aa13.52□□□□□ -0.25
GGA1-216ENST00000460957 LMX1BO60663 402 aa13.52□□□□□ -0.25
GGA1-216ENST00000460957 LILRA1O75019 489 aa13.52□□□□□ -0.25
GGA1-216ENST00000460957 ANXA2P07355 339 aaKnown RBP13.52□□□□□ -0.25
GGA1-216ENST00000460957 H2BFMP0C1H6 154 aa13.52□□□□□ -0.25
GGA1-216ENST00000460957 HOXB4P17483 251 aaPredicted RBP13.52□□□□□ -0.25
GGA1-216ENST00000460957 IGFBP5P24593 272 aa13.52□□□□□ -0.25
GGA1-216ENST00000460957 CDH15P55291 814 aa13.52□□□□□ -0.25
GGA1-216ENST00000460957 CDK5R2Q13319 367 aa13.52□□□□□ -0.25
GGA1-216ENST00000460957 PTGES3Q15185 160 aaKnown RBP13.52□□□□□ -0.25
GGA1-216ENST00000460957 SLC35D3Q5M8T2 416 aa13.52□□□□□ -0.25
GGA1-216ENST00000460957 AVPI1Q5T686 147 aa13.52□□□□□ -0.25
GGA1-216ENST00000460957 OR8G5Q8NG78 346 aa13.52□□□□□ -0.25
GGA1-216ENST00000460957 OR13G1Q8NGZ3 307 aa13.52□□□□□ -0.25
GGA1-216ENST00000460957 THEM6Q8WUY1 208 aa13.52□□□□□ -0.25
GGA1-216ENST00000460957 CENPNQ96H22 339 aaPredicted RBP13.52□□□□□ -0.25
GGA1-216ENST00000460957 POM121Q96HA1 1249 aa13.52□□□□□ -0.25
GGA1-216ENST00000460957 TOR3AQ9H497 397 aa13.52□□□□□ -0.25
GGA1-216ENST00000460957 DDX28Q9NUL7 540 aaKnown RBP13.52□□□□□ -0.25
GGA1-216ENST00000460957 ORC6Q9Y5N6 252 aa13.52□□□□□ -0.25
GGA1-216ENST00000460957 HIVEP2P31629 2446 aa13.51□□□□□ -0.25
GGA1-216ENST00000460957 GGT3PA6NGU5 568 aa13.51□□□□□ -0.25
GGA1-216ENST00000460957 SAC3D1A6NKF1 404 aa13.51□□□□□ -0.25
GGA1-216ENST00000460957 ADH4P08319 380 aa13.51□□□□□ -0.25
GGA1-216ENST00000460957 HNF1AP20823 631 aa13.51□□□□□ -0.25
GGA1-216ENST00000460957 NAA10P41227 235 aaPredicted RBP13.51□□□□□ -0.25
GGA1-216ENST00000460957 CX3CR1P49238 355 aa13.51□□□□□ -0.25
GGA1-216ENST00000460957 APOFQ13790 326 aa13.51□□□□□ -0.25
GGA1-216ENST00000460957 KPNB1Q14974 876 aaKnown RBP13.51□□□□□ -0.25
GGA1-216ENST00000460957 CHRFAM7AQ494W8 412 aa13.51□□□□□ -0.25
GGA1-216ENST00000460957 TMEM255AQ5JRV8 349 aa13.51□□□□□ -0.25
GGA1-216ENST00000460957 LINC01590Q5TEZ4 76 aa13.51□□□□□ -0.25
GGA1-216ENST00000460957 ZFP1Q6P2D0 407 aa13.51□□□□□ -0.25
GGA1-216ENST00000460957 NAA40Q86UY6 237 aa13.51□□□□□ -0.25
GGA1-216ENST00000460957 LINC01356Q8N9X3 169 aa13.51□□□□□ -0.25
GGA1-216ENST00000460957 OR10S1Q8NGN2 331 aa13.51□□□□□ -0.25
GGA1-216ENST00000460957 MSI2Q96DH6 328 aaKnown RBP13.51□□□□□ -0.25
GGA1-216ENST00000460957 SHARPINQ9H0F6 387 aa13.51□□□□□ -0.25
GGA1-216ENST00000460957 TMEM100Q9NV29 134 aa13.51□□□□□ -0.25
GGA1-216ENST00000460957 DNAJC27Q9NZQ0 273 aa13.51□□□□□ -0.25
GGA1-216ENST00000460957 IL19Q9UHD0 177 aa13.51□□□□□ -0.25
GGA1-216ENST00000460957 OAZ3Q9UMX2 235 aa13.51□□□□□ -0.25
GGA1-216ENST00000460957 NOP16Q9Y3C1 178 aaKnown RBP13.51□□□□□ -0.25
GGA1-216ENST00000460957 C2CD3Q4AC94 2353 aa13.51□□□□□ -0.25
GGA1-216ENST00000460957 YLPM1P49750 1951 aaKnown RBP13.51□□□□□ -0.25
GGA1-216ENST00000460957 ABCA1O95477 2261 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 IQCF6A8MYZ5 107 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 SELENOFO60613 162 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 MITFO75030 526 aaPredicted RBP13.5□□□□□ -0.25
GGA1-216ENST00000460957 CRLF1O75462 422 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 RP2O75695 350 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 LYNP07948 512 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 CD55P08174 381 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 SLC2A1P11166 492 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 SRP9P49458 86 aaKnown RBP13.5□□□□□ -0.25
GGA1-216ENST00000460957 ACTR3P61158 418 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 GK2Q14410 553 aaPredicted RBP13.5□□□□□ -0.25
GGA1-216ENST00000460957 PCK2Q16822 640 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 TIGD6Q17RP2 521 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 RSPO1Q2MKA7 263 aaPredicted RBP13.5□□□□□ -0.25
GGA1-216ENST00000460957 KRTAP27-1Q3LI81 207 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 COLCA1Q6ZS62 124 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 ZNF454Q8N9F8 522 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 OR10AD1Q8NGE0 317 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 CLDND2Q8NHS1 167 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 ITLN1Q8WWA0 313 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 RAB39BQ96DA2 213 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 OR2V2Q96R30 315 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 GAL3ST1Q99999 423 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 ABHD6Q9BV23 337 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 BEX2Q9BXY8 128 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 GABARAPL1Q9H0R8 117 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 RIBC2Q9H4K1 309 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 LPAR3Q9UBY5 353 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 LAMP5Q9UJQ1 280 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 PPP1R3CQ9UQK1 317 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 CACNG2Q9Y698 323 aa13.5□□□□□ -0.25
GGA1-216ENST00000460957 XRCC2O43543 280 aa13.49□□□□□ -0.25
GGA1-216ENST00000460957 PSKH1P11801 424 aa13.49□□□□□ -0.25
GGA1-216ENST00000460957 ANPEPP15144 967 aa13.49□□□□□ -0.25
GGA1-216ENST00000460957 PRSS12P56730 875 aa13.49□□□□□ -0.25
GGA1-216ENST00000460957 SNAI3Q3KNW1 292 aa13.49□□□□□ -0.25
GGA1-216ENST00000460957 KDM4DQ6B0I6 523 aa13.49□□□□□ -0.25
GGA1-216ENST00000460957 Q6ZR03 302 aa13.49□□□□□ -0.25
GGA1-216ENST00000460957 ZNF771Q7L3S4 317 aaPredicted RBP13.49□□□□□ -0.25
GGA1-216ENST00000460957 BBS1Q8NFJ9 593 aa13.49□□□□□ -0.25
GGA1-216ENST00000460957 OR2AE1Q8NHA4 323 aa13.49□□□□□ -0.25
GGA1-216ENST00000460957 ST7LQ8TDW4 575 aa13.49□□□□□ -0.25
GGA1-216ENST00000460957 PGAM5Q96HS1 289 aa13.49□□□□□ -0.25
GGA1-216ENST00000460957 RBM4BQ9BQ04 359 aaKnown RBP13.49□□□□□ -0.25
GGA1-216ENST00000460957 OPA3Q9H6K4 179 aa13.49□□□□□ -0.25
GGA1-216ENST00000460957 MARCH7Q9H992 704 aa13.49□□□□□ -0.25
GGA1-216ENST00000460957 BRD7Q9NPI1 651 aa13.49□□□□□ -0.25
GGA1-216ENST00000460957 CDC42EP3Q9UKI2 254 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms