RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 TCEAL7Q9BRU2 100 aa13.81□□□□□ -0.2
LMNB1-203ENST00000460265 PTGES2Q9H7Z7 377 aa13.81□□□□□ -0.2
LMNB1-203ENST00000460265 ZNF629Q9UEG4 869 aaPredicted RBP13.81□□□□□ -0.2
LMNB1-203ENST00000460265 PDGFBP01127 241 aaPredicted RBP13.8□□□□□ -0.2
LMNB1-203ENST00000460265 FABP9Q0Z7S8 132 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 SGCBQ16585 318 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 OGFOD3Q6PK18 319 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 SLC43A2Q8N370 569 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 OTOSQ8NHW6 89 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 FAM71F1Q96KD3 344 aaPredicted RBP13.8□□□□□ -0.2
LMNB1-203ENST00000460265 RBM14Q96PK6 669 aaKnown RBP13.8□□□□□ -0.2
LMNB1-203ENST00000460265 MNTQ99583 582 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 EXO5Q9H790 373 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 PLEKHA1Q9HB21 404 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 CHMP1AQ9HD42 196 aaPredicted RBP13.8□□□□□ -0.2
LMNB1-203ENST00000460265 ZNF275Q9NSD4 429 aaPredicted RBP13.8□□□□□ -0.2
LMNB1-203ENST00000460265 LHX6Q9UPM6 363 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 A0A0G2JK05 382 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 OR2M5A3KFT3 312 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 TRAPPC6AO75865 159 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 ZNF43P17038 809 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 PXKQ7Z7A4 578 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 ZNF546Q86UE3 836 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 EDAQ92838 391 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 CPNE2Q96FN4 548 aaPredicted RBP13.8□□□□□ -0.2
LMNB1-203ENST00000460265 TXNIPQ9H3M7 391 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 OCIAD1Q9NX40 245 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 KLHL13Q9P2N7 655 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 WNT16Q9UBV4 365 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 C9J4A7 227 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 FARS2O95363 451 aaKnown RBP13.8□□□□□ -0.2
LMNB1-203ENST00000460265 GP1BAP07359 652 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 BTF3P20290 206 aaKnown RBP13.8□□□□□ -0.2
LMNB1-203ENST00000460265 PPT1P50897 306 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 PEA15Q15121 130 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 LINC00303Q3SY05 128 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 RNF212Q495C1 297 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 H1FNTQ75WM6 255 aaPredicted RBP13.8□□□□□ -0.2
LMNB1-203ENST00000460265 ACBD4Q8NC06 268 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 OR1S2Q8NGQ3 325 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 OR6K3Q8NGY3 331 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 MAFAQ8NHW3 353 aaPredicted RBP13.8□□□□□ -0.2
LMNB1-203ENST00000460265 TAS2R4Q9NYW5 299 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 C19orf25Q9UFG5 118 aaPredicted RBP13.8□□□□□ -0.2
LMNB1-203ENST00000460265 PCDHB10Q9UN67 800 aa13.8□□□□□ -0.2
LMNB1-203ENST00000460265 A0A1B0GV90 55 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 FITM1A5D6W6 292 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 OR2A4O95047 310 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 UBBP0CG47 229 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 UBCP0CG48 685 aaKnown RBP13.79□□□□□ -0.2
LMNB1-203ENST00000460265 PRF1P14222 555 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 CPN1P15169 458 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 NFYBP25208 207 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 OTX2P32243 289 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 CDAP32320 146 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 RPS11P62280 158 aaKnown RBP eCLIP13.79□□□□□ -0.2
LMNB1-203ENST00000460265 RPS27AP62979 156 aaKnown RBP13.79□□□□□ -0.2
LMNB1-203ENST00000460265 UBA52P62987 128 aaKnown RBP13.79□□□□□ -0.2
LMNB1-203ENST00000460265 SLC17A1Q14916 467 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 ATXN7L3Q14CW9 347 aaPredicted RBP13.79□□□□□ -0.2
LMNB1-203ENST00000460265 OR2B11Q5JQS5 317 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 ACER2Q5QJU3 275 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 UEVLDQ8IX04 471 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 ZNF679Q8IYX0 411 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 SMIM4Q8WVI0 70 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 PNPLA2Q96AD5 504 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 OR2A7Q96R45 310 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 MICU1Q9BPX6 476 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 DUSP23Q9BVJ7 150 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 RASL12Q9NYN1 266 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 PLEKHA6Q9Y2H5 1048 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 SULT2B1O00204 365 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 ZNF354AO60765 605 aaPredicted RBP13.79□□□□□ -0.2
LMNB1-203ENST00000460265 SC5DO75845 299 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 PRSS3P35030 304 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 SLC26A5P58743 744 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 IL10RAQ13651 578 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 C21orf62-AS1Q17RA5 79 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 COL13A1Q5TAT6 717 aaPredicted RBP13.79□□□□□ -0.2
LMNB1-203ENST00000460265 BEND4Q6ZU67 534 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 ZNF565Q8N9K5 539 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 STK35Q8TDR2 534 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 FAM3DQ96BQ1 224 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 TMEM231Q9H6L2 316 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 COL6A3P12111 3177 aa13.79□□□□□ -0.2
LMNB1-203ENST00000460265 TMEM82A0PJX8 343 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 ACOT7O00154 380 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 MT-ATP6P00846 226 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 IGHV2-70P01814 119 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 NPBWR1P48145 328 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 EFNA3P52797 238 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 TAS2R20P59543 309 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 HSF1Q00613 529 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 INSM1Q01101 510 aaPredicted RBP13.78□□□□□ -0.2
LMNB1-203ENST00000460265 DHRS7BQ6IAN0 325 aaPredicted RBP13.78□□□□□ -0.2
LMNB1-203ENST00000460265 ZNF283Q8N7M2 679 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 FGGYQ96C11 551 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 LRFN5Q96NI6 719 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 HHLA2Q9UM44 414 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 F5H5K5 113 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms