RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 HTR6P50406 440 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 RPS16P62249 146 aaKnown RBP8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 ZNF239Q16600 458 aaKnown RBP8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 CLPPQ16740 277 aaPredicted RBP8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 PDZD11Q5EBL8 140 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 BEX5Q5H9J7 111 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 CPEB2Q7Z5Q1 589 aaKnown RBP8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 GABARAPL3Q9BY60 117 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 PLEKHA2Q9HB19 425 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 MBLAC1A4D2B0 266 aaPredicted RBP8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 TARM1B6A8C7 271 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 UMAD1C9J7I0 102 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 RPS25P62851 125 aaKnown RBP8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 VMA21Q3ZAQ7 101 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 SLC48A1Q6P1K1 146 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 GDF7Q7Z4P5 450 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 FAM26EQ8N5C1 309 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 SLC38A9Q8NBW4 561 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 INSM2Q96T92 566 aaPredicted RBP8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 LANCL2Q9NS86 450 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 FGF21Q9NSA1 209 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 LHX3Q9UBR4 397 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 SLC17A4Q9Y2C5 497 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 NSG2Q9Y328 171 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 TEX50A0A1B0GTY4 177 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 HS3ST1O14792 307 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 ZNF207O43670 478 aaKnown RBP8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 NPY4RP50391 375 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 HTR4Q13639 388 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 PHLDA2Q53GA4 152 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 C18orf63Q68DL7 685 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 KMT5CQ86Y97 462 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 HSD17B11Q8NBQ5 300 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 CXorf58Q96LI9 332 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 LINC00597Q9H2U6 94 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 MKRN2OSH3BPM6 223 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 M0R1B8 84 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 PTGESO14684 152 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 MGMTP16455 207 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 UBALD2Q8IYN6 164 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 MFSD4AQ8N468 514 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 WDTC1Q8N5D0 677 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 EIF4E3Q8N5X7 224 aaKnown RBP8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 POM121L2Q96KW2 1035 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 ZNF768Q9H5H4 540 aaKnown RBP8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 ZNF391Q9UJN7 358 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 NUMBLQ9Y6R0 609 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 URGCP-MRPS24S4R325 110 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 C1SP09871 688 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 OR5G3P0C626 314 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 MEOX1P50221 254 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 TMEM52BQ4KMG9 183 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 BTLAQ7Z6A9 289 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 ZDHHC23Q8IYP9 409 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 TMEM230Q96A57 120 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 MAP6Q96JE9 813 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 FURINP09958 794 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 SLC6A11P48066 632 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 CTSCP53634 463 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 DNAJC5GQ8N7S2 189 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 FOXN4Q96NZ1 517 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 DUSP21Q9H596 190 aa8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 COL16A1Q07092 1604 aaPredicted RBP8.12□□□□□ -1.11
SHROOM4-203ENST00000460112 ACOD1A6NK06 481 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 H0YIG0 161 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 PDGFBP01127 241 aaPredicted RBP8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 GASTP01350 101 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 TPPP2P59282 170 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 FUNDC1Q8IVP5 155 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 BCL2L2Q92843 193 aaPredicted RBP8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 NOL4LQ96MY1 436 aaPredicted RBP8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 CTRCQ99895 268 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 VAMP8Q9BV40 100 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 MS4A8Q9BY19 250 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 FABP7O15540 132 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 SSSCA1O60232 199 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 ZP3P21754 424 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 SYPL1Q16563 259 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 TMUB2Q71RG4 321 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 EXD3Q8N9H8 876 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 IFI44Q8TCB0 444 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 PELI1Q96FA3 418 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 NMNAT3Q96T66 252 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 LIMS3P0CW19 117 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 LIMS4P0CW20 117 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 SNRPBP14678 240 aaKnown RBP8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 MDH2P40926 338 aaKnown RBP8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 TMEM183BQ1AE95 376 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 ZNF468Q5VIY5 522 aaPredicted RBP8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 RNF165Q6ZSG1 346 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 FAM71CQ8NEG0 241 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 OR5D18Q8NGL1 313 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 A0A1B0GWA3 101 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 OR2A25A4D2G3 310 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 APEX1P27695 318 aaKnown RBP8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 HOXA4Q00056 320 aaPredicted RBP8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 OLIG1Q8TAK6 271 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 MENTQ9BUN1 341 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 DSCR3O14972 297 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 TCAPO15273 167 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms