RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 FCGR1AP12314 374 aa15.87■□□□□ 0.13
USP39-209ENST00000458268 RAC2P15153 192 aa15.87■□□□□ 0.13
USP39-209ENST00000458268 KITLGP21583 273 aa15.87■□□□□ 0.13
USP39-209ENST00000458268 HSD11B1P28845 292 aa15.87■□□□□ 0.13
USP39-209ENST00000458268 CRYBB2P43320 205 aa15.87■□□□□ 0.13
USP39-209ENST00000458268 BLVRAP53004 296 aa15.87■□□□□ 0.13
USP39-209ENST00000458268 RSPO1Q2MKA7 263 aaPredicted RBP15.87■□□□□ 0.13
USP39-209ENST00000458268 LINC01590Q5TEZ4 76 aa15.87■□□□□ 0.13
USP39-209ENST00000458268 Q6ZR03 302 aa15.87■□□□□ 0.13
USP39-209ENST00000458268 IL17RELQ6ZVW7 336 aa15.87■□□□□ 0.13
USP39-209ENST00000458268 ZDHHC13Q8IUH4 622 aa15.87■□□□□ 0.13
USP39-209ENST00000458268 OR2AE1Q8NHA4 323 aa15.87■□□□□ 0.13
USP39-209ENST00000458268 ITLN1Q8WWA0 313 aa15.87■□□□□ 0.13
USP39-209ENST00000458268 NRBF2Q96F24 287 aa15.87■□□□□ 0.13
USP39-209ENST00000458268 ZNF582Q96NG8 517 aaPredicted RBP15.87■□□□□ 0.13
USP39-209ENST00000458268 BRD7Q9NPI1 651 aa15.87■□□□□ 0.13
USP39-209ENST00000458268 ZDHHC8Q9ULC8 765 aa15.87■□□□□ 0.13
USP39-209ENST00000458268 NIPBLQ6KC79 2804 aaeCLIP15.87■□□□□ 0.13
USP39-209ENST00000458268 TANC2Q9HCD6 1990 aa15.87■□□□□ 0.13
USP39-209ENST00000458268 ABCA2Q9BZC7 2435 aa15.87■□□□□ 0.13
USP39-209ENST00000458268 NAV3Q8IVL0 2385 aa15.86■□□□□ 0.13
USP39-209ENST00000458268 ZNF878C9JN71 531 aa15.86■□□□□ 0.13
USP39-209ENST00000458268 LMX1BO60663 402 aa15.86■□□□□ 0.13
USP39-209ENST00000458268 CRLF1O75462 422 aa15.86■□□□□ 0.13
USP39-209ENST00000458268 ANXA2P07355 339 aaKnown RBP15.86■□□□□ 0.13
USP39-209ENST00000458268 TACSTD2P09758 323 aa15.86■□□□□ 0.13
USP39-209ENST00000458268 TUBG1P23258 451 aa15.86■□□□□ 0.13
USP39-209ENST00000458268 TMEM33P57088 247 aa15.86■□□□□ 0.13
USP39-209ENST00000458268 CDK5Q00535 292 aa15.86■□□□□ 0.13
USP39-209ENST00000458268 KPNB1Q14974 876 aaKnown RBP15.86■□□□□ 0.13
USP39-209ENST00000458268 GFOD2Q3B7J2 385 aa15.86■□□□□ 0.13
USP39-209ENST00000458268 FAHD1Q6P587 224 aa15.86■□□□□ 0.13
USP39-209ENST00000458268 ASRGL1Q7L266 308 aa15.86■□□□□ 0.13
USP39-209ENST00000458268 THEM6Q8WUY1 208 aa15.86■□□□□ 0.13
USP39-209ENST00000458268 DNAJC9Q8WXX5 260 aa15.86■□□□□ 0.13
USP39-209ENST00000458268 TIMD4Q96H15 378 aa15.86■□□□□ 0.13
USP39-209ENST00000458268 DIRC2Q96SL1 478 aa15.86■□□□□ 0.13
USP39-209ENST00000458268 C1QTNF5Q9BXJ0 243 aa15.86■□□□□ 0.13
USP39-209ENST00000458268 SLC25A19Q9HC21 320 aa15.86■□□□□ 0.13
USP39-209ENST00000458268 TUBG2Q9NRH3 451 aa15.86■□□□□ 0.13
USP39-209ENST00000458268 H0YL77 283 aa15.85■□□□□ 0.13
USP39-209ENST00000458268 J3QW42 95 aa15.85■□□□□ 0.13
USP39-209ENST00000458268 MRPL3P09001 348 aaKnown RBP15.85■□□□□ 0.13
USP39-209ENST00000458268 MRPS11P82912 194 aaKnown RBP15.85■□□□□ 0.13
USP39-209ENST00000458268 APOFQ13790 326 aa15.85■□□□□ 0.13
USP39-209ENST00000458268 GK2Q14410 553 aaPredicted RBP15.85■□□□□ 0.13
USP39-209ENST00000458268 SNAI3Q3KNW1 292 aa15.85■□□□□ 0.13
USP39-209ENST00000458268 FBXW12Q6X9E4 464 aa15.85■□□□□ 0.13
USP39-209ENST00000458268 PGAP1Q75T13 922 aa15.85■□□□□ 0.13
USP39-209ENST00000458268 SPRYD4Q8WW59 207 aaPredicted RBP15.85■□□□□ 0.13
USP39-209ENST00000458268 OR2V2Q96R30 315 aa15.85■□□□□ 0.13
USP39-209ENST00000458268 ABHD6Q9BV23 337 aa15.85■□□□□ 0.13
USP39-209ENST00000458268 DCAF16Q9NXF7 216 aa15.85■□□□□ 0.13
USP39-209ENST00000458268 UBAP1Q9NZ09 502 aa15.85■□□□□ 0.13
USP39-209ENST00000458268 WIPI2Q9Y4P8 454 aa15.85■□□□□ 0.13
USP39-209ENST00000458268 C5orf63A6NC05 138 aa15.84■□□□□ 0.13
USP39-209ENST00000458268 GGT3PA6NGU5 568 aa15.84■□□□□ 0.13
USP39-209ENST00000458268 HLA-DPB1P04440 258 aa15.84■□□□□ 0.13
USP39-209ENST00000458268 H2BFMP0C1H6 154 aa15.84■□□□□ 0.13
USP39-209ENST00000458268 ANOS1P23352 680 aa15.84■□□□□ 0.13
USP39-209ENST00000458268 IGFBP5P24593 272 aa15.84■□□□□ 0.13
USP39-209ENST00000458268 CX3CR1P49238 355 aa15.84■□□□□ 0.13
USP39-209ENST00000458268 CDK5R2Q13319 367 aa15.84■□□□□ 0.13
USP39-209ENST00000458268 PTGES3Q15185 160 aaKnown RBP15.84■□□□□ 0.13
USP39-209ENST00000458268 CHRFAM7AQ494W8 412 aa15.84■□□□□ 0.13
USP39-209ENST00000458268 SHFQ7M4L6 423 aa15.84■□□□□ 0.13
USP39-209ENST00000458268 OR8G5Q8NG78 346 aa15.84■□□□□ 0.13
USP39-209ENST00000458268 ST7LQ8TDW4 575 aa15.84■□□□□ 0.13
USP39-209ENST00000458268 RAB1CQ92928 201 aa15.84■□□□□ 0.13
USP39-209ENST00000458268 AMELYQ99218 206 aa15.84■□□□□ 0.13
USP39-209ENST00000458268 KCNJ15Q99712 375 aa15.84■□□□□ 0.13
USP39-209ENST00000458268 GAL3ST1Q99999 423 aa15.84■□□□□ 0.13
USP39-209ENST00000458268 BEX2Q9BXY8 128 aa15.84■□□□□ 0.13
USP39-209ENST00000458268 TTTY10Q9BZA0 68 aa15.84■□□□□ 0.13
USP39-209ENST00000458268 SHARPINQ9H0F6 387 aa15.84■□□□□ 0.13
USP39-209ENST00000458268 RIBC2Q9H4K1 309 aa15.84■□□□□ 0.13
USP39-209ENST00000458268 DDX28Q9NUL7 540 aaKnown RBP15.84■□□□□ 0.13
USP39-209ENST00000458268 OAZ3Q9UMX2 235 aa15.84■□□□□ 0.13
USP39-209ENST00000458268 F5H5P2 479 aa15.83■□□□□ 0.12
USP39-209ENST00000458268 SELEP16581 610 aa15.83■□□□□ 0.12
USP39-209ENST00000458268 TNFRSF1AP19438 455 aa15.83■□□□□ 0.12
USP39-209ENST00000458268 SLC15A1P46059 708 aa15.83■□□□□ 0.12
USP39-209ENST00000458268 KRTAP27-1Q3LI81 207 aa15.83■□□□□ 0.12
USP39-209ENST00000458268 GLYATL3Q5SZD4 288 aa15.83■□□□□ 0.12
USP39-209ENST00000458268 DRAM2Q6UX65 266 aa15.83■□□□□ 0.12
USP39-209ENST00000458268 BCDIN3DQ7Z5W3 292 aaKnown RBP15.83■□□□□ 0.12
USP39-209ENST00000458268 PEG10Q86TG7 708 aaKnown RBP15.83■□□□□ 0.12
USP39-209ENST00000458268 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.83■□□□□ 0.12
USP39-209ENST00000458268 LINC01356Q8N9X3 169 aa15.83■□□□□ 0.12
USP39-209ENST00000458268 OR13G1Q8NGZ3 307 aa15.83■□□□□ 0.12
USP39-209ENST00000458268 PRRG3Q9BZD7 231 aa15.83■□□□□ 0.12
USP39-209ENST00000458268 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.83■□□□□ 0.127e-10■■■■■ 36.5
USP39-209ENST00000458268 FAM157AC9JC47 383 aa15.82■□□□□ 0.12
USP39-209ENST00000458268 PRODHO43272 600 aa15.82■□□□□ 0.12
USP39-209ENST00000458268 PRKYO43930 277 aa15.82■□□□□ 0.12
USP39-209ENST00000458268 LYNP07948 512 aa15.82■□□□□ 0.12
USP39-209ENST00000458268 CD55P08174 381 aa15.82■□□□□ 0.12
USP39-209ENST00000458268 ADH4P08319 380 aa15.82■□□□□ 0.12
USP39-209ENST00000458268 EPHA2P29317 976 aa15.82■□□□□ 0.12
USP39-209ENST00000458268 HCCSP53701 268 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms