RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 TOR3AQ9H497 397 aa19.71■□□□□ 0.75
CBX3-204ENST00000456948 TVP23BQ9NYZ1 205 aa19.71■□□□□ 0.75
CBX3-204ENST00000456948 KCNS2Q9ULS6 477 aa19.71■□□□□ 0.75
CBX3-204ENST00000456948 FN1P02751 2386 aaKnown RBP19.7■□□□□ 0.74
CBX3-204ENST00000456948 LRP5LA4QPB2 252 aa19.7■□□□□ 0.74
CBX3-204ENST00000456948 HSD11B1P28845 292 aa19.7■□□□□ 0.74
CBX3-204ENST00000456948 RSPO1Q2MKA7 263 aaPredicted RBP19.7■□□□□ 0.74
CBX3-204ENST00000456948 LINC01590Q5TEZ4 76 aa19.7■□□□□ 0.74
CBX3-204ENST00000456948 OR2T2Q6IF00 324 aa19.7■□□□□ 0.74
CBX3-204ENST00000456948 ZFP1Q6P2D0 407 aa19.7■□□□□ 0.74
CBX3-204ENST00000456948 PGAP1Q75T13 922 aa19.7■□□□□ 0.74
CBX3-204ENST00000456948 MRPL21Q7Z2W9 205 aaKnown RBP19.7■□□□□ 0.74
CBX3-204ENST00000456948 DPY19L4Q7Z388 723 aa19.7■□□□□ 0.74
CBX3-204ENST00000456948 AMIGO2Q86SJ2 522 aa19.7■□□□□ 0.74
CBX3-204ENST00000456948 ZNF454Q8N9F8 522 aa19.7■□□□□ 0.74
CBX3-204ENST00000456948 OR8G5Q8NG78 346 aa19.7■□□□□ 0.74
CBX3-204ENST00000456948 LRTOMTQ8WZ04 291 aa19.7■□□□□ 0.74
CBX3-204ENST00000456948 GTF3AQ92664 365 aaKnown RBP19.7■□□□□ 0.74
CBX3-204ENST00000456948 H2AFY2Q9P0M6 372 aaPredicted RBP19.7■□□□□ 0.74
CBX3-204ENST00000456948 IL19Q9UHD0 177 aa19.7■□□□□ 0.74
CBX3-204ENST00000456948 NOP16Q9Y3C1 178 aaKnown RBP19.7■□□□□ 0.74
CBX3-204ENST00000456948 LMX1BO60663 402 aa19.69■□□□□ 0.74
CBX3-204ENST00000456948 CRLF1O75462 422 aa19.69■□□□□ 0.74
CBX3-204ENST00000456948 RP2O75695 350 aa19.69■□□□□ 0.74
CBX3-204ENST00000456948 PTGES3Q15185 160 aaKnown RBP19.69■□□□□ 0.74
CBX3-204ENST00000456948 LYPD4Q6UWN0 246 aa19.69■□□□□ 0.74
CBX3-204ENST00000456948 CXXC5Q7LFL8 322 aaKnown RBP19.69■□□□□ 0.74
CBX3-204ENST00000456948 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.69■□□□□ 0.74
CBX3-204ENST00000456948 LINC01356Q8N9X3 169 aa19.69■□□□□ 0.74
CBX3-204ENST00000456948 SPRYD4Q8WW59 207 aaPredicted RBP19.69■□□□□ 0.74
CBX3-204ENST00000456948 RAB3IPQ96QF0 476 aaPredicted RBP19.69■□□□□ 0.74
CBX3-204ENST00000456948 OPA3Q9H6K4 179 aa19.69■□□□□ 0.74
CBX3-204ENST00000456948 MARCH7Q9H992 704 aa19.69■□□□□ 0.74
CBX3-204ENST00000456948 TMEM100Q9NV29 134 aa19.69■□□□□ 0.74
CBX3-204ENST00000456948 TMEM160Q9NX00 188 aa19.69■□□□□ 0.74
CBX3-204ENST00000456948 LPAR3Q9UBY5 353 aa19.69■□□□□ 0.74
CBX3-204ENST00000456948 CDC42EP3Q9UKI2 254 aa19.69■□□□□ 0.74
CBX3-204ENST00000456948 TGFAP01135 160 aa19.68■□□□□ 0.74
CBX3-204ENST00000456948 ANPEPP15144 967 aa19.68■□□□□ 0.74
CBX3-204ENST00000456948 PCMT1P22061 227 aa19.68■□□□□ 0.74
CBX3-204ENST00000456948 RAD23AP54725 363 aa19.68■□□□□ 0.74
CBX3-204ENST00000456948 ACTR3P61158 418 aa19.68■□□□□ 0.74
CBX3-204ENST00000456948 TRIP10Q15642 601 aa19.68■□□□□ 0.74
CBX3-204ENST00000456948 LCN1P1Q5VSP4 162 aa19.68■□□□□ 0.74
CBX3-204ENST00000456948 TMEM236Q5W0B7 351 aa19.68■□□□□ 0.74
CBX3-204ENST00000456948 OR5AS1Q8N127 324 aa19.68■□□□□ 0.74
CBX3-204ENST00000456948 ZNF283Q8N7M2 679 aa19.68■□□□□ 0.74
CBX3-204ENST00000456948 MSI2Q96DH6 328 aaKnown RBP19.68■□□□□ 0.74
CBX3-204ENST00000456948 SLC22A4Q9H015 551 aa19.68■□□□□ 0.74
CBX3-204ENST00000456948 GABARAPL1Q9H0R8 117 aa19.68■□□□□ 0.74
CBX3-204ENST00000456948 SONP18583 2426 aaKnown RBP19.67■□□□□ 0.74
CBX3-204ENST00000456948 IQCF6A8MYZ5 107 aa19.67■□□□□ 0.74
CBX3-204ENST00000456948 IFNL4K9M1U5 179 aa19.67■□□□□ 0.74
CBX3-204ENST00000456948 ZNF16P17020 682 aaPredicted RBP19.67■□□□□ 0.74
CBX3-204ENST00000456948 OTX1P32242 354 aaPredicted RBP19.67■□□□□ 0.74
CBX3-204ENST00000456948 SRP9P49458 86 aaKnown RBP19.67■□□□□ 0.74
CBX3-204ENST00000456948 PRKXP51817 358 aa19.67■□□□□ 0.74
CBX3-204ENST00000456948 GK2Q14410 553 aaPredicted RBP19.67■□□□□ 0.74
CBX3-204ENST00000456948 CHRFAM7AQ494W8 412 aa19.67■□□□□ 0.74
CBX3-204ENST00000456948 TMEM255AQ5JRV8 349 aa19.67■□□□□ 0.74
CBX3-204ENST00000456948 OR10S1Q8NGN2 331 aa19.67■□□□□ 0.74
CBX3-204ENST00000456948 ST7LQ8TDW4 575 aa19.67■□□□□ 0.74
CBX3-204ENST00000456948 ZMYND19Q96E35 227 aaPredicted RBP19.67■□□□□ 0.74
CBX3-204ENST00000456948 ABHD6Q9BV23 337 aa19.67■□□□□ 0.74
CBX3-204ENST00000456948 SEMA6AQ9H2E6 1030 aa19.67■□□□□ 0.74
CBX3-204ENST00000456948 B4DSR2 109 aa19.66■□□□□ 0.74
CBX3-204ENST00000456948 LYNP07948 512 aa19.66■□□□□ 0.74
CBX3-204ENST00000456948 H2BFMP0C1H6 154 aa19.66■□□□□ 0.74
CBX3-204ENST00000456948 HNF1AP20823 631 aa19.66■□□□□ 0.74
CBX3-204ENST00000456948 IGFBP5P24593 272 aa19.66■□□□□ 0.74
CBX3-204ENST00000456948 KDM4DQ6B0I6 523 aa19.66■□□□□ 0.74
CBX3-204ENST00000456948 SPATC1Q76KD6 591 aa19.66■□□□□ 0.74
CBX3-204ENST00000456948 NAA40Q86UY6 237 aa19.66■□□□□ 0.74
CBX3-204ENST00000456948 TIGD4Q8IY51 512 aa19.66■□□□□ 0.74
CBX3-204ENST00000456948 RAB39BQ96DA2 213 aa19.66■□□□□ 0.74
CBX3-204ENST00000456948 BEX2Q9BXY8 128 aa19.66■□□□□ 0.74
CBX3-204ENST00000456948 PPP1R3CQ9UQK1 317 aa19.66■□□□□ 0.74
CBX3-204ENST00000456948 N6AMT1Q9Y5N5 214 aa19.66■□□□□ 0.74
CBX3-204ENST00000456948 ORC6Q9Y5N6 252 aa19.66■□□□□ 0.74
CBX3-204ENST00000456948 GGT3PA6NGU5 568 aa19.65■□□□□ 0.74
CBX3-204ENST00000456948 XRCC2O43543 280 aa19.65■□□□□ 0.74
CBX3-204ENST00000456948 ANXA2P07355 339 aaKnown RBP19.65■□□□□ 0.74
CBX3-204ENST00000456948 CDH15P55291 814 aa19.65■□□□□ 0.74
CBX3-204ENST00000456948 MVKQ03426 396 aa19.65■□□□□ 0.74
CBX3-204ENST00000456948 APOFQ13790 326 aa19.65■□□□□ 0.74
CBX3-204ENST00000456948 CLDND2Q8NHS1 167 aa19.65■□□□□ 0.74
CBX3-204ENST00000456948 OTOSQ8NHW6 89 aa19.65■□□□□ 0.74
CBX3-204ENST00000456948 THEM6Q8WUY1 208 aa19.65■□□□□ 0.74
CBX3-204ENST00000456948 RNF133Q8WVZ7 376 aa19.65■□□□□ 0.74
CBX3-204ENST00000456948 PYDC1Q8WXC3 89 aa19.65■□□□□ 0.74
CBX3-204ENST00000456948 OR2V2Q96R30 315 aa19.65■□□□□ 0.74
CBX3-204ENST00000456948 RBM4BQ9BQ04 359 aaKnown RBP19.65■□□□□ 0.74
CBX3-204ENST00000456948 SLC30A2Q9BRI3 323 aa19.65■□□□□ 0.74
CBX3-204ENST00000456948 SHARPINQ9H0F6 387 aa19.65■□□□□ 0.74
CBX3-204ENST00000456948 NARFLQ9H6Q4 476 aa19.65■□□□□ 0.74
CBX3-204ENST00000456948 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.64■□□□□ 0.742e-60■■■■□ 26
CBX3-204ENST00000456948 CFL1P23528 166 aaKnown RBP19.64■□□□□ 0.73
CBX3-204ENST00000456948 CX3CR1P49238 355 aa19.64■□□□□ 0.73
CBX3-204ENST00000456948 KPNB1Q14974 876 aaKnown RBP19.64■□□□□ 0.73
CBX3-204ENST00000456948 KCTD18Q6PI47 426 aaPredicted RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms