RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 NAA40Q86UY6 237 aa13.72□□□□□ -0.21
CPSF6-203ENST00000456847 HS3ST5Q8IZT8 346 aa13.72□□□□□ -0.21
CPSF6-203ENST00000456847 OR10S1Q8NGN2 331 aa13.72□□□□□ -0.21
CPSF6-203ENST00000456847 OR13G1Q8NGZ3 307 aa13.72□□□□□ -0.21
CPSF6-203ENST00000456847 CADM1Q9BY67 442 aaKnown RBP13.72□□□□□ -0.21
CPSF6-203ENST00000456847 MED20Q9H944 212 aa13.72□□□□□ -0.21
CPSF6-203ENST00000456847 CENPMQ9NSP4 180 aa13.72□□□□□ -0.21
CPSF6-203ENST00000456847 KIF17Q9P2E2 1029 aa13.72□□□□□ -0.21
CPSF6-203ENST00000456847 PPP1R3CQ9UQK1 317 aa13.72□□□□□ -0.21
CPSF6-203ENST00000456847 NPTNQ9Y639 398 aa13.72□□□□□ -0.21
CPSF6-203ENST00000456847 IQCF6A8MYZ5 107 aa13.72□□□□□ -0.21
CPSF6-203ENST00000456847 ZNF593O00488 134 aaPredicted RBP13.72□□□□□ -0.21
CPSF6-203ENST00000456847 GSC2O15499 205 aa13.72□□□□□ -0.21
CPSF6-203ENST00000456847 IGHV2-5P01817 119 aa13.72□□□□□ -0.21
CPSF6-203ENST00000456847 PSKH1P11801 424 aa13.72□□□□□ -0.21
CPSF6-203ENST00000456847 RASSF2P50749 326 aa13.72□□□□□ -0.21
CPSF6-203ENST00000456847 HNRNPA0Q13151 305 aaKnown RBP13.72□□□□□ -0.21
CPSF6-203ENST00000456847 COLCA1Q6ZS62 124 aa13.72□□□□□ -0.21
CPSF6-203ENST00000456847 ZNF283Q8N7M2 679 aa13.72□□□□□ -0.21
CPSF6-203ENST00000456847 OR6N2Q8NGY6 317 aa13.72□□□□□ -0.21
CPSF6-203ENST00000456847 SLAMF6Q96DU3 332 aa13.72□□□□□ -0.21
CPSF6-203ENST00000456847 DDX28Q9NUL7 540 aaKnown RBP13.72□□□□□ -0.21
CPSF6-203ENST00000456847 DCAF16Q9NXF7 216 aa13.72□□□□□ -0.21
CPSF6-203ENST00000456847 TRAV20A0A0B4J274 112 aa13.71□□□□□ -0.21
CPSF6-203ENST00000456847 RNF212BA8MTL3 300 aa13.71□□□□□ -0.21
CPSF6-203ENST00000456847 ZNF878C9JN71 531 aa13.71□□□□□ -0.21
CPSF6-203ENST00000456847 ANXA8P13928 327 aa13.71□□□□□ -0.21
CPSF6-203ENST00000456847 SRP9P49458 86 aaKnown RBP13.71□□□□□ -0.21
CPSF6-203ENST00000456847 EIF2B1Q14232 305 aaKnown RBP13.71□□□□□ -0.21
CPSF6-203ENST00000456847 GK2Q14410 553 aaPredicted RBP13.71□□□□□ -0.21
CPSF6-203ENST00000456847 GINS1Q14691 196 aa13.71□□□□□ -0.21
CPSF6-203ENST00000456847 SHQ1Q6PI26 577 aaKnown RBP13.71□□□□□ -0.21
CPSF6-203ENST00000456847 PGAP1Q75T13 922 aa13.71□□□□□ -0.21
CPSF6-203ENST00000456847 SPATC1Q76KD6 591 aa13.71□□□□□ -0.21
CPSF6-203ENST00000456847 CXXC5Q7LFL8 322 aaKnown RBP13.71□□□□□ -0.21
CPSF6-203ENST00000456847 ERI1Q8IV48 349 aaKnown RBP13.71□□□□□ -0.21
CPSF6-203ENST00000456847 SLCO4A1Q96BD0 722 aa13.71□□□□□ -0.21
CPSF6-203ENST00000456847 INTS14Q96SY0 518 aa13.71□□□□□ -0.21
CPSF6-203ENST00000456847 PCDHB10Q9UN67 800 aa13.71□□□□□ -0.21
CPSF6-203ENST00000456847 N6AMT1Q9Y5N5 214 aa13.71□□□□□ -0.21
CPSF6-203ENST00000456847 PHF1O43189 567 aaPredicted RBP13.7□□□□□ -0.22
CPSF6-203ENST00000456847 SBK2P0C263 348 aa13.7□□□□□ -0.22
CPSF6-203ENST00000456847 OSMP13725 252 aa13.7□□□□□ -0.22
CPSF6-203ENST00000456847 PRKACGP22612 351 aa13.7□□□□□ -0.22
CPSF6-203ENST00000456847 PRKXP51817 358 aa13.7□□□□□ -0.22
CPSF6-203ENST00000456847 DRAM2Q6UX65 266 aa13.7□□□□□ -0.22
CPSF6-203ENST00000456847 ST7LQ8TDW4 575 aa13.7□□□□□ -0.22
CPSF6-203ENST00000456847 SPRYD4Q8WW59 207 aaPredicted RBP13.7□□□□□ -0.22
CPSF6-203ENST00000456847 PLEKHA8Q96JA3 519 aa13.7□□□□□ -0.22
CPSF6-203ENST00000456847 MEGF10Q96KG7 1140 aa13.7□□□□□ -0.22
CPSF6-203ENST00000456847 OR51V1Q9H2C8 321 aa13.7□□□□□ -0.22
CPSF6-203ENST00000456847 TMEM100Q9NV29 134 aa13.7□□□□□ -0.22
CPSF6-203ENST00000456847 PRR23D1E9PI22 279 aaPredicted RBP13.7□□□□□ -0.22
CPSF6-203ENST00000456847 H0YL77 283 aa13.7□□□□□ -0.22
CPSF6-203ENST00000456847 DEAF1O75398 565 aaPredicted RBP13.7□□□□□ -0.22
CPSF6-203ENST00000456847 TIPRLO75663 272 aa13.7□□□□□ -0.22
CPSF6-203ENST00000456847 PRR23D2P0DMB1 279 aaPredicted RBP13.7□□□□□ -0.22
CPSF6-203ENST00000456847 GSTT1P30711 240 aa13.7□□□□□ -0.22
CPSF6-203ENST00000456847 SNAI3Q3KNW1 292 aa13.7□□□□□ -0.22
CPSF6-203ENST00000456847 PAPD5Q8NDF8 572 aaKnown RBP13.7□□□□□ -0.22
CPSF6-203ENST00000456847 KCNJ15Q99712 375 aa13.7□□□□□ -0.22
CPSF6-203ENST00000456847 SLC30A2Q9BRI3 323 aa13.7□□□□□ -0.22
CPSF6-203ENST00000456847 TEX12Q9BXU0 123 aa13.7□□□□□ -0.22
CPSF6-203ENST00000456847 F5H5P2 479 aa13.69□□□□□ -0.22
CPSF6-203ENST00000456847 MLNRO43193 412 aa13.69□□□□□ -0.22
CPSF6-203ENST00000456847 ATP5HO75947 161 aa13.69□□□□□ -0.22
CPSF6-203ENST00000456847 GLCEO94923 617 aa13.69□□□□□ -0.22
CPSF6-203ENST00000456847 IGHV2-70P01814 119 aa13.69□□□□□ -0.22
CPSF6-203ENST00000456847 HSD11B1P28845 292 aa13.69□□□□□ -0.22
CPSF6-203ENST00000456847 RBMXP38159 391 aaKnown RBP13.69□□□□□ -0.22
CPSF6-203ENST00000456847 MMP16P51512 607 aa13.69□□□□□ -0.22
CPSF6-203ENST00000456847 RAD23AP54725 363 aa13.69□□□□□ -0.22
CPSF6-203ENST00000456847 TEX30Q5JUR7 227 aa13.69□□□□□ -0.22
CPSF6-203ENST00000456847 LINC01590Q5TEZ4 76 aa13.69□□□□□ -0.22
CPSF6-203ENST00000456847 FAHD2BQ6P2I3 314 aaPredicted RBP13.69□□□□□ -0.22
CPSF6-203ENST00000456847 PLBD1Q6P4A8 553 aa13.69□□□□□ -0.22
CPSF6-203ENST00000456847 SPICQ8N5J4 248 aa13.69□□□□□ -0.22
CPSF6-203ENST00000456847 OR2AE1Q8NHA4 323 aa13.69□□□□□ -0.22
CPSF6-203ENST00000456847 FAHD2AQ96GK7 314 aa13.69□□□□□ -0.22
CPSF6-203ENST00000456847 IGHV3-64DA0A0J9YX35 117 aa13.68□□□□□ -0.22
CPSF6-203ENST00000456847 GGT3PA6NGU5 568 aa13.68□□□□□ -0.22
CPSF6-203ENST00000456847 PLPP2O43688 288 aa13.68□□□□□ -0.22
CPSF6-203ENST00000456847 PNPP00491 289 aa13.68□□□□□ -0.22
CPSF6-203ENST00000456847 HMGN1P05114 100 aa13.68□□□□□ -0.22
CPSF6-203ENST00000456847 SLC2A1P11166 492 aa13.68□□□□□ -0.22
CPSF6-203ENST00000456847 SLC15A1P46059 708 aa13.68□□□□□ -0.22
CPSF6-203ENST00000456847 BTG1P62324 171 aa13.68□□□□□ -0.22
CPSF6-203ENST00000456847 GRB2P62993 217 aaKnown RBP13.68□□□□□ -0.22
CPSF6-203ENST00000456847 PCK2Q16822 640 aa13.68□□□□□ -0.22
CPSF6-203ENST00000456847 KLHL12Q53G59 568 aa13.68□□□□□ -0.22
CPSF6-203ENST00000456847 DPY19L4Q7Z388 723 aa13.68□□□□□ -0.22
CPSF6-203ENST00000456847 KLHL36Q8N4N3 616 aa13.68□□□□□ -0.22
CPSF6-203ENST00000456847 ZNF420Q8TAQ5 688 aaPredicted RBP13.68□□□□□ -0.22
CPSF6-203ENST00000456847 TMEM158Q8WZ71 300 aa13.68□□□□□ -0.22
CPSF6-203ENST00000456847 GCM1Q9NP62 436 aa13.68□□□□□ -0.22
CPSF6-203ENST00000456847 IFNL4K9M1U5 179 aa13.68□□□□□ -0.22
CPSF6-203ENST00000456847 TBX1O43435 398 aa13.68□□□□□ -0.22
CPSF6-203ENST00000456847 HLA-DPB1P04440 258 aa13.68□□□□□ -0.22
CPSF6-203ENST00000456847 OTX1P32242 354 aaPredicted RBP13.68□□□□□ -0.22
CPSF6-203ENST00000456847 RPS7P62081 194 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms