RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 PHF19Q5T6S3 580 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 ALKAL2Q6UX46 152 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 CFAP77Q6ZQR2 320 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 MUC20Q8N307 709 aaPredicted RBP16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 ST8SIA4Q92187 359 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 ADAT3Q96EY9 351 aaPredicted RBP16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 AIFM2Q9BRQ8 373 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 CNTD2Q9H8S5 307 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 PFDN2Q9UHV9 154 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 ZNF107Q9UII5 783 aaPredicted RBP16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 FRYLO94915 3013 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 A0A1B0GTI1 187 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 WIPF3A6NGB9 483 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 RP2O75695 350 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 RAB3DO95716 219 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 S100A11P31949 105 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 SEC61A1P61619 476 aaKnown RBP16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 ZNF529Q6P280 563 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 OR2AK2Q8NG84 335 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 OR1M1Q8NGA1 313 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 OR1J2Q8NGS2 313 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 OR6X1Q8NH79 312 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 PNPLA2Q96AD5 504 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 OXGR1Q96P68 337 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 IER2Q9BTL4 223 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 CHST6Q9GZX3 395 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 MED9Q9NWA0 146 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 RAB22AQ9UL26 194 aa16.31■□□□□ 0.2
SEMA3B-209ENST00000456560 ATP6V1G2-DDX39BF2Z307 99 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 ARPC5O15511 151 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 SYT7O43581 403 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 GDF9O60383 454 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 CD74P04233 296 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 ZNF735P0CB33 412 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 ADH6P28332 368 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 CLDN6P56747 220 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 QRFPP83859 136 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 HIST3H3Q16695 136 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 TMUB2Q71RG4 321 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 GALNT16Q8N428 558 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 PAQR4Q8N4S7 273 aaPredicted RBP16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 OR4K17Q8NGC6 315 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 IFI44Q8TCB0 444 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 SLC25A43Q8WUT9 341 aaPredicted RBP16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 ZC4H2Q9NQZ6 224 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 PHF3Q92576 2039 aaKnown RBP16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 RAMP1O60894 148 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 B3GALNT1O75752 331 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 ZNF28P17035 718 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 EIF1P41567 113 aaKnown RBP16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 H2BFSP57053 126 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 IL11RAQ14626 422 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 OR52N4Q8NGI2 321 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 SCARB1Q8WTV0 552 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 AQP3Q92482 292 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 TINAGL1Q9GZM7 467 aaPredicted RBP16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 SHARPINQ9H0F6 387 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 GAREM1Q9H706 876 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 EXO5Q9H790 373 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 TMEM138Q9NPI0 162 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 HDGFL3Q9Y3E1 203 aa16.3■□□□□ 0.2
SEMA3B-209ENST00000456560 LOC102725191A0A1B0GVB3 256 aa16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 AQP7P3A6NL99 342 aa16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 KRBOX1C9JBD0 128 aa16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 KCNMB1Q16558 191 aa16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 HYAL4Q2M3T9 481 aa16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 TMEM176BQ3YBM2 270 aaPredicted RBP16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 RHOUQ7L0Q8 258 aa16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 OVCH2Q7RTZ1 564 aa16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 PTGES2Q9H7Z7 377 aa16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 SEC61A2Q9H9S3 476 aa16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 OPN4Q9UHM6 478 aa16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 NXT1Q9UKK6 140 aaKnown RBP16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 KLK13Q9UKR3 277 aa16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 RAB27BO00194 218 aa16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 LGALS8O00214 317 aa16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 TP53I11O14683 189 aa16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 SIX6O95475 246 aa16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 FKBP2P26885 142 aaKnown RBP16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 CDAP32320 146 aa16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 GNALP38405 381 aa16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 UNC119Q13432 240 aa16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 ZNF260Q3ZCT1 412 aa16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 RAB12Q6IQ22 244 aa16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 WDR5BQ86VZ2 330 aa16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 SLC25A21Q9BQT8 299 aaPredicted RBP16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 UQCC2Q9BRT2 126 aa16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 MS4A7Q9GZW8 240 aaPredicted RBP16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 ZMAT3Q9HA38 289 aaKnown RBP16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 MYOZ1Q9NP98 299 aaPredicted RBP16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 UPB1Q9UBR1 384 aa16.29■□□□□ 0.2
SEMA3B-209ENST00000456560 FXYD6-FXYD2A0A087WZ82 144 aa16.28■□□□□ 0.2
SEMA3B-209ENST00000456560 ZNF878C9JN71 531 aa16.28■□□□□ 0.2
SEMA3B-209ENST00000456560 M0QYG6 137 aa16.28■□□□□ 0.2
SEMA3B-209ENST00000456560 M0R296 226 aa16.28■□□□□ 0.2
SEMA3B-209ENST00000456560 BPNT1O95861 308 aa16.28■□□□□ 0.2
SEMA3B-209ENST00000456560 CELA2AP08217 269 aa16.28■□□□□ 0.2
SEMA3B-209ENST00000456560 PPP3CBP16298 524 aa16.28■□□□□ 0.2
SEMA3B-209ENST00000456560 KLK2P20151 261 aa16.28■□□□□ 0.2
SEMA3B-209ENST00000456560 SFTPDP35247 375 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms