RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 ARMCX4Q5H9R4 360 aa18.2■□□□□ 0.5
SEC22C-213ENST00000456222 ZNF362Q5T0B9 420 aaPredicted RBP18.2■□□□□ 0.5
SEC22C-213ENST00000456222 SLC27A4Q6P1M0 643 aa18.2■□□□□ 0.5
SEC22C-213ENST00000456222 CPLX4Q7Z7G2 160 aa18.2■□□□□ 0.5
SEC22C-213ENST00000456222 C19orf18Q8NEA5 215 aa18.2■□□□□ 0.5
SEC22C-213ENST00000456222 OR8D4Q8NGM9 314 aa18.2■□□□□ 0.5
SEC22C-213ENST00000456222 GNPDA2Q8TDQ7 276 aa18.2■□□□□ 0.5
SEC22C-213ENST00000456222 MCUR1Q96AQ8 359 aa18.2■□□□□ 0.5
SEC22C-213ENST00000456222 TMEM246Q9BRR3 403 aa18.2■□□□□ 0.5
SEC22C-213ENST00000456222 TAGLN3Q9UI15 199 aa18.2■□□□□ 0.5
SEC22C-213ENST00000456222 NUP50Q9UKX7 468 aa18.2■□□□□ 0.5
SEC22C-213ENST00000456222 TRRAPQ9Y4A5 3859 aa18.2■□□□□ 0.5
SEC22C-213ENST00000456222 IGHV3OR16-10A0A075B7F0 116 aa18.19■□□□□ 0.5
SEC22C-213ENST00000456222 HLA-DQA2P01906 255 aa18.19■□□□□ 0.5
SEC22C-213ENST00000456222 LCATP04180 440 aa18.19■□□□□ 0.5
SEC22C-213ENST00000456222 RPS2P15880 293 aaKnown RBP18.19■□□□□ 0.5
SEC22C-213ENST00000456222 ATP6V1B2P21281 511 aa18.19■□□□□ 0.5
SEC22C-213ENST00000456222 PAX8Q06710 450 aa18.19■□□□□ 0.5
SEC22C-213ENST00000456222 KLBQ86Z14 1044 aa18.19■□□□□ 0.5
SEC22C-213ENST00000456222 DEFB107AQ8IZN7 70 aa18.19■□□□□ 0.5
SEC22C-213ENST00000456222 MUC20Q8N307 709 aaPredicted RBP18.19■□□□□ 0.5
SEC22C-213ENST00000456222 C3orf56Q8N813 242 aa18.19■□□□□ 0.5
SEC22C-213ENST00000456222 DACT3Q96B18 629 aaPredicted RBP18.19■□□□□ 0.5
SEC22C-213ENST00000456222 SLCO4A1Q96BD0 722 aa18.19■□□□□ 0.5
SEC22C-213ENST00000456222 SSBP3Q9BWW4 388 aaPredicted RBP18.19■□□□□ 0.5
SEC22C-213ENST00000456222 HCAR1Q9BXC0 346 aa18.19■□□□□ 0.5
SEC22C-213ENST00000456222 TMEM100Q9NV29 134 aa18.19■□□□□ 0.5
SEC22C-213ENST00000456222 TMCC3Q9ULS5 477 aa18.19■□□□□ 0.5
SEC22C-213ENST00000456222 LRCH1Q9Y2L9 728 aa18.19■□□□□ 0.5
SEC22C-213ENST00000456222 LYVE1Q9Y5Y7 322 aa18.19■□□□□ 0.5
SEC22C-213ENST00000456222 MEGF8Q7Z7M0 2845 aa18.18■□□□□ 0.5
SEC22C-213ENST00000456222 TVP23AA6NH52 213 aa18.18■□□□□ 0.5
SEC22C-213ENST00000456222 BHLHE40O14503 412 aa18.18■□□□□ 0.5
SEC22C-213ENST00000456222 IDH3BO43837 385 aa18.18■□□□□ 0.5
SEC22C-213ENST00000456222 IGHV4-38-2P0DP08 117 aa18.18■□□□□ 0.5
SEC22C-213ENST00000456222 PPP1R8Q12972 351 aaKnown RBP18.18■□□□□ 0.5
SEC22C-213ENST00000456222 SNAI3Q3KNW1 292 aa18.18■□□□□ 0.5
SEC22C-213ENST00000456222 ZNF404Q494X3 552 aa18.18■□□□□ 0.5
SEC22C-213ENST00000456222 SLC36A3Q495N2 470 aa18.18■□□□□ 0.5
SEC22C-213ENST00000456222 AWAT1Q58HT5 328 aa18.18■□□□□ 0.5
SEC22C-213ENST00000456222 ZNF770Q6IQ21 691 aaPredicted RBP18.18■□□□□ 0.5
SEC22C-213ENST00000456222 LYPD2Q6UXB3 125 aa18.18■□□□□ 0.5
SEC22C-213ENST00000456222 CYP2R1Q6VVX0 501 aa18.18■□□□□ 0.5
SEC22C-213ENST00000456222 DOK3Q7L591 496 aa18.18■□□□□ 0.5
SEC22C-213ENST00000456222 OR51L1Q8NGJ5 315 aa18.18■□□□□ 0.5
SEC22C-213ENST00000456222 OR4C15Q8NGM1 316 aa18.18■□□□□ 0.5
SEC22C-213ENST00000456222 OR2AJ1Q8NGZ0 328 aa18.18■□□□□ 0.5
SEC22C-213ENST00000456222 MRI1Q9BV20 369 aa18.18■□□□□ 0.5
SEC22C-213ENST00000456222 CDADC1Q9BWV3 514 aa18.18■□□□□ 0.5
SEC22C-213ENST00000456222 NSRP1Q9H0G5 558 aaKnown RBP18.18■□□□□ 0.5
SEC22C-213ENST00000456222 OR5V1Q9UGF6 321 aa18.18■□□□□ 0.5
SEC22C-213ENST00000456222 CDH10Q9Y6N8 788 aa18.18■□□□□ 0.5
SEC22C-213ENST00000456222 DNAJC9-AS1A6NH13 148 aa18.17■□□□□ 0.5
SEC22C-213ENST00000456222 IFNL4K9M1U5 179 aa18.17■□□□□ 0.5
SEC22C-213ENST00000456222 EGR1P18146 543 aa18.17■□□□□ 0.5
SEC22C-213ENST00000456222 IFNGR2P38484 337 aa18.17■□□□□ 0.5
SEC22C-213ENST00000456222 HMGA2P52926 109 aa18.17■□□□□ 0.5
SEC22C-213ENST00000456222 ECH1Q13011 328 aa18.17■□□□□ 0.5
SEC22C-213ENST00000456222 MPPED2Q15777 294 aa18.17■□□□□ 0.5
SEC22C-213ENST00000456222 ZNF181Q2M3W8 571 aa18.17■□□□□ 0.5
SEC22C-213ENST00000456222 PRAMEF6Q5VXH4 476 aa18.17■□□□□ 0.5
SEC22C-213ENST00000456222 PIGWQ7Z7B1 504 aa18.17■□□□□ 0.5
SEC22C-213ENST00000456222 NTN4Q9HB63 628 aa18.17■□□□□ 0.5
SEC22C-213ENST00000456222 DDX28Q9NUL7 540 aaKnown RBP18.17■□□□□ 0.5
SEC22C-213ENST00000456222 VNN3Q9NY84 501 aa18.17■□□□□ 0.5
SEC22C-213ENST00000456222 M0R135 149 aa18.16■□□□□ 0.5
SEC22C-213ENST00000456222 ATP8B1O43520 1251 aa18.16■□□□□ 0.5
SEC22C-213ENST00000456222 GATA4P43694 442 aa18.16■□□□□ 0.5
SEC22C-213ENST00000456222 RAD23AP54725 363 aa18.16■□□□□ 0.5
SEC22C-213ENST00000456222 GNGT1P63211 74 aa18.16■□□□□ 0.5
SEC22C-213ENST00000456222 OR9Q1Q8NGQ5 310 aa18.16■□□□□ 0.5
SEC22C-213ENST00000456222 OR2AE1Q8NHA4 323 aa18.16■□□□□ 0.5
SEC22C-213ENST00000456222 TAF15Q92804 592 aaKnown RBP eCLIP18.16■□□□□ 0.5
SEC22C-213ENST00000456222 ZNF799Q96GE5 643 aa18.16■□□□□ 0.5
SEC22C-213ENST00000456222 UFSP2Q9NUQ7 469 aa18.16■□□□□ 0.5
SEC22C-213ENST00000456222 ARL2BPQ9Y2Y0 163 aa18.16■□□□□ 0.5
SEC22C-213ENST00000456222 IGHV2-70DA0A0C4DH43 119 aa18.15■□□□□ 0.5
SEC22C-213ENST00000456222 TNFRSF11BO00300 401 aa18.15■□□□□ 0.5
SEC22C-213ENST00000456222 FAM20BO75063 409 aa18.15■□□□□ 0.5
SEC22C-213ENST00000456222 GASTP01350 101 aa18.15■□□□□ 0.5
SEC22C-213ENST00000456222 GNB2P62879 340 aa18.15■□□□□ 0.5
SEC22C-213ENST00000456222 ZNF92Q03936 586 aa18.15■□□□□ 0.5
SEC22C-213ENST00000456222 PGAP1Q75T13 922 aa18.15■□□□□ 0.5
SEC22C-213ENST00000456222 SLC37A3Q8NCC5 494 aa18.15■□□□□ 0.5
SEC22C-213ENST00000456222 PROKR2Q8NFJ6 384 aa18.15■□□□□ 0.5
SEC22C-213ENST00000456222 OR4Q3Q8NH05 313 aa18.15■□□□□ 0.5
SEC22C-213ENST00000456222 NEIL1Q96FI4 390 aaPredicted RBP18.15■□□□□ 0.5
SEC22C-213ENST00000456222 IL20Q9NYY1 176 aa18.15■□□□□ 0.5
SEC22C-213ENST00000456222 COMMD3-BMI1R4GMX3 469 aa18.15■□□□□ 0.5
SEC22C-213ENST00000456222 TCRBV5S2A0A599 114 aa18.14■□□□□ 0.49
SEC22C-213ENST00000456222 CD300LBA8K4G0 201 aa18.14■□□□□ 0.49
SEC22C-213ENST00000456222 GYPBP06028 91 aa18.14■□□□□ 0.49
SEC22C-213ENST00000456222 ZNF823P16415 610 aa18.14■□□□□ 0.49
SEC22C-213ENST00000456222 CA6P23280 308 aa18.14■□□□□ 0.49
SEC22C-213ENST00000456222 OTX1P32242 354 aaPredicted RBP18.14■□□□□ 0.49
SEC22C-213ENST00000456222 CD200P41217 278 aa18.14■□□□□ 0.49
SEC22C-213ENST00000456222 MAGEA2P43356 314 aa18.14■□□□□ 0.49
SEC22C-213ENST00000456222 TPTEP56180 551 aa18.14■□□□□ 0.49
SEC22C-213ENST00000456222 C16orf89Q6UX73 402 aa18.14■□□□□ 0.49
SEC22C-213ENST00000456222 MRPL21Q7Z2W9 205 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms