RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 ZBED6CLQ96FA7 236 aaPredicted RBP6.9□□□□□ -1.3
BRCC3-208ENST00000453705 HSPA12BQ96MM6 686 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 TGM7Q96PF1 710 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 CSF3RQ99062 836 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 FKRPQ9H9S5 495 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 KRCC1Q9NPI7 259 aaPredicted RBP6.9□□□□□ -1.3
BRCC3-208ENST00000453705 CTPS2Q9NRF8 586 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 GHRLQ9UBU3 117 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 LAMP3Q9UQV4 416 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 ANGPT4Q9Y264 503 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 FARSAQ9Y285 508 aaKnown RBP6.9□□□□□ -1.3
BRCC3-208ENST00000453705 FAM96BQ9Y3D0 163 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 TRIOO75962 3097 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.9□□□□□ -1.31
BRCC3-208ENST00000453705 TGIF2-C20orf24A0A0A6YYL0 155 aa6.9□□□□□ -1.31
BRCC3-208ENST00000453705 H3BMH7 237 aa6.9□□□□□ -1.31
BRCC3-208ENST00000453705 ADAM10O14672 748 aa6.9□□□□□ -1.31
BRCC3-208ENST00000453705 EI24O14681 340 aa6.9□□□□□ -1.31
BRCC3-208ENST00000453705 UGT2B11O75310 529 aa6.9□□□□□ -1.31
BRCC3-208ENST00000453705 SOX30O94993 753 aa6.9□□□□□ -1.31
BRCC3-208ENST00000453705 WISP1O95388 367 aa6.9□□□□□ -1.31
BRCC3-208ENST00000453705 PPBPP02775 128 aa6.9□□□□□ -1.31
BRCC3-208ENST00000453705 CD74P04233 296 aa6.9□□□□□ -1.31
BRCC3-208ENST00000453705 FABP3P05413 133 aa6.9□□□□□ -1.31
BRCC3-208ENST00000453705 CD36P16671 472 aa6.9□□□□□ -1.31
BRCC3-208ENST00000453705 IER3P46695 156 aa6.9□□□□□ -1.31
BRCC3-208ENST00000453705 BAMBIQ13145 260 aa6.9□□□□□ -1.31
BRCC3-208ENST00000453705 FAM166AQ6J272 317 aa6.9□□□□□ -1.31
BRCC3-208ENST00000453705 AMIGO1Q86WK6 493 aa6.9□□□□□ -1.31
BRCC3-208ENST00000453705 ZDHHC13Q8IUH4 622 aa6.9□□□□□ -1.31
BRCC3-208ENST00000453705 OR9Q2Q8NGE9 314 aa6.9□□□□□ -1.31
BRCC3-208ENST00000453705 RHOXF1Q8NHV9 184 aa6.9□□□□□ -1.31
BRCC3-208ENST00000453705 IL17DQ8TAD2 202 aa6.9□□□□□ -1.31
BRCC3-208ENST00000453705 PIK3R3Q92569 461 aa6.9□□□□□ -1.31
BRCC3-208ENST00000453705 IL4I1Q96RQ9 567 aa6.9□□□□□ -1.31
BRCC3-208ENST00000453705 MBOAT4Q96T53 435 aa6.9□□□□□ -1.31
BRCC3-208ENST00000453705 NDUFAF3Q9BU61 184 aa6.9□□□□□ -1.31
BRCC3-208ENST00000453705 SLC19A3Q9BZV2 496 aa6.9□□□□□ -1.31
BRCC3-208ENST00000453705 ISYNA1Q9NPH2 558 aa6.9□□□□□ -1.31
BRCC3-208ENST00000453705 ALG5Q9Y673 324 aa6.9□□□□□ -1.31
BRCC3-208ENST00000453705 A0A0G2JMP0 313 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 H0YL77 283 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 TNFP01375 233 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 KLK1P06870 262 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 FBP1P09467 338 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 PUDPQ08623 228 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 FZD5Q13467 585 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 NRF1Q16656 503 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 AKIRIN2Q53H80 203 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 ATAD3CQ5T2N8 411 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 ZNF773Q6PK81 442 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 BTNL3Q6UXE8 466 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 ZNF740Q8NDX6 193 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 APH1BQ8WW43 257 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 NAT6Q93015 286 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 AJUBAQ96IF1 538 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 ZFP3Q96NJ6 502 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 SLC35A5Q9BS91 424 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 SEMA6AQ9H2E6 1030 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 OR51M1Q9H341 326 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 CDH10Q9Y6N8 788 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 DSPPQ9NZW4 1301 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 SPTY2D1-AS1A0A0U1RR47 76 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 LILRA5A6NI73 299 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 G3V2T6 193 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 TMPRSS11DO60235 418 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 UPK1BO75841 260 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 OR7A10O76100 309 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 LRATO95237 230 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 C6orf47O95873 294 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 HIST1H1TP22492 207 aaPredicted RBP6.89□□□□□ -1.31
BRCC3-208ENST00000453705 ATP5A1P25705 553 aaKnown RBP6.89□□□□□ -1.31
BRCC3-208ENST00000453705 FOXC1Q12948 553 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 FOXL1Q12952 345 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.89□□□□□ -1.31
BRCC3-208ENST00000453705 H3F3CQ6NXT2 135 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 CASP12Q6UXS9 341 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 ZNF517Q6ZMY9 492 aaPredicted RBP6.89□□□□□ -1.31
BRCC3-208ENST00000453705 DOK3Q7L591 496 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 HDDC2Q7Z4H3 204 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 TSEN54Q7Z6J9 526 aaKnown RBP6.89□□□□□ -1.31
BRCC3-208ENST00000453705 IFNEQ86WN2 208 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 CCDC71Q8IV32 467 aaPredicted RBP6.89□□□□□ -1.31
BRCC3-208ENST00000453705 LGI4Q8N135 537 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 MDS2Q8NDY4 140 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 OR56A1Q8NGH5 318 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 GATAD1Q8WUU5 269 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 GEMIN6Q8WXD5 167 aaKnown RBP6.89□□□□□ -1.31
BRCC3-208ENST00000453705 CLDN23Q96B33 292 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 WDYHV1Q96HA8 205 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 VSTM2LQ96N03 204 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 BARHL1Q9BZE3 327 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 POLR2J2Q9GZM3 115 aaKnown RBP6.89□□□□□ -1.31
BRCC3-208ENST00000453705 POLR2J3Q9H1A7 115 aaKnown RBP6.89□□□□□ -1.31
BRCC3-208ENST00000453705 SAP30LQ9HAJ7 183 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 RETNQ9HD89 108 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 Q9N2K0 584 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 EPHA6Q9UF33 1036 aa6.89□□□□□ -1.31
BRCC3-208ENST00000453705 A0A1W2PPE3 182 aa6.88□□□□□ -1.31
BRCC3-208ENST00000453705 C9P02748 559 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms