RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 MS4A18Q3C1V0 323 aa14.07□□□□□ -0.16
SNX17-204ENST00000453453 DNM1P46Q6ZS02 220 aa14.07□□□□□ -0.16
SNX17-204ENST00000453453 Q6ZTK2 550 aa14.07□□□□□ -0.16
SNX17-204ENST00000453453 UEVLDQ8IX04 471 aa14.07□□□□□ -0.16
SNX17-204ENST00000453453 CMTM4Q8IZR5 234 aa14.07□□□□□ -0.16
SNX17-204ENST00000453453 KDF1Q8NAX2 398 aaPredicted RBP14.07□□□□□ -0.16
SNX17-204ENST00000453453 BEST4Q8NFU0 473 aa14.07□□□□□ -0.16
SNX17-204ENST00000453453 OR52H1Q8NGJ2 320 aa14.07□□□□□ -0.16
SNX17-204ENST00000453453 OR10D3Q8NH80 312 aa14.07□□□□□ -0.16
SNX17-204ENST00000453453 THEM6Q8WUY1 208 aa14.07□□□□□ -0.16
SNX17-204ENST00000453453 CPNE4Q96A23 557 aaPredicted RBP14.07□□□□□ -0.16
SNX17-204ENST00000453453 PNPLA2Q96AD5 504 aa14.07□□□□□ -0.16
SNX17-204ENST00000453453 DNTTIP1Q9H147 329 aa14.07□□□□□ -0.16
SNX17-204ENST00000453453 TXNIPQ9H3M7 391 aa14.07□□□□□ -0.16
SNX17-204ENST00000453453 RCE1Q9Y256 329 aa14.07□□□□□ -0.16
SNX17-204ENST00000453453 LIPGQ9Y5X9 500 aa14.07□□□□□ -0.16
SNX17-204ENST00000453453 ARPC4-TTLL3A0A0A6YYG9 625 aa14.06□□□□□ -0.16
SNX17-204ENST00000453453 NPIPB13A6NJU9 1138 aa14.06□□□□□ -0.16
SNX17-204ENST00000453453 NPIPB4C9JG80 1138 aa14.06□□□□□ -0.16
SNX17-204ENST00000453453 NDUFB6O95139 128 aa14.06□□□□□ -0.16
SNX17-204ENST00000453453 IGHMP01871 453 aa14.06□□□□□ -0.16
SNX17-204ENST00000453453 HIST1H1CP16403 213 aaKnown RBP14.06□□□□□ -0.16
SNX17-204ENST00000453453 HSF1Q00613 529 aa14.06□□□□□ -0.16
SNX17-204ENST00000453453 POU3F1Q03052 451 aaPredicted RBP14.06□□□□□ -0.16
SNX17-204ENST00000453453 SRYQ05066 204 aa14.06□□□□□ -0.16
SNX17-204ENST00000453453 GK2Q14410 553 aaPredicted RBP14.06□□□□□ -0.16
SNX17-204ENST00000453453 HLXQ14774 488 aaPredicted RBP14.06□□□□□ -0.16
SNX17-204ENST00000453453 LINGO2Q7L985 606 aa14.06□□□□□ -0.16
SNX17-204ENST00000453453 BVESQ8NE79 360 aa14.06□□□□□ -0.16
SNX17-204ENST00000453453 OR52E2Q8NGJ4 325 aa14.06□□□□□ -0.16
SNX17-204ENST00000453453 OR4K13Q8NH42 304 aa14.06□□□□□ -0.16
SNX17-204ENST00000453453 RASD2Q96D21 266 aa14.06□□□□□ -0.16
SNX17-204ENST00000453453 ADGRG7Q96K78 797 aa14.06□□□□□ -0.16
SNX17-204ENST00000453453 Q96M85 177 aa14.06□□□□□ -0.16
SNX17-204ENST00000453453 OXGR1Q96P68 337 aa14.06□□□□□ -0.16
SNX17-204ENST00000453453 TSPAN32Q96QS1 320 aa14.06□□□□□ -0.16
SNX17-204ENST00000453453 TBX5Q99593 518 aa14.06□□□□□ -0.16
SNX17-204ENST00000453453 AUNIPQ9H7T9 357 aa14.06□□□□□ -0.16
SNX17-204ENST00000453453 NOX3Q9HBY0 568 aa14.06□□□□□ -0.16
SNX17-204ENST00000453453 FANCFQ9NPI8 374 aa14.06□□□□□ -0.16
SNX17-204ENST00000453453 LHX6Q9UPM6 363 aa14.06□□□□□ -0.16
SNX17-204ENST00000453453 MRPS7Q9Y2R9 242 aaKnown RBP14.06□□□□□ -0.16
SNX17-204ENST00000453453 ZFHX4Q86UP3 3567 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 A0A1B0GVC2 190 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 SLC22A23A1A5C7 686 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 UBE2QL1A1L167 161 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 A6NIN4 97 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 A6NIZ1 184 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 ARPC1BO15143 372 aaKnown RBP14.05□□□□□ -0.16
SNX17-204ENST00000453453 CXCL13O43927 109 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 SYNGR4O95473 234 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 FAM87AP0C7U9 286 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 GABRA1P14867 456 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 ZNF43P17038 809 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 RAB3AP20336 220 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 PYCR1P32322 319 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 ACVR1BP36896 505 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 SUCLG1P53597 346 aaKnown RBP14.05□□□□□ -0.16
SNX17-204ENST00000453453 CLDN15P56746 228 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 CLDN18P56856 261 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 OR12D2P58182 307 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 RAP1BP61224 184 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 RAP1AP62834 184 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 ACKR1Q16570 336 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 PLEKHN1Q494U1 663 aaPredicted RBP14.05□□□□□ -0.16
SNX17-204ENST00000453453 FAM122BQ7Z309 247 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 STPG2Q8N412 459 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 DTX3Q8N9I9 347 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 ORAI1Q96D31 301 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 HCAR1Q9BXC0 346 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 TSPAN10Q9H1Z9 355 aaPredicted RBP14.05□□□□□ -0.16
SNX17-204ENST00000453453 MED20Q9H944 212 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 ZNF71Q9NQZ8 489 aaPredicted RBP14.05□□□□□ -0.16
SNX17-204ENST00000453453 ZNF346Q9UL40 294 aaKnown RBP14.05□□□□□ -0.16
SNX17-204ENST00000453453 CELSR3Q9NYQ7 3312 aa14.05□□□□□ -0.16
SNX17-204ENST00000453453 LOC102725191A0A1B0GVB3 256 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 H0YC42 278 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 ABCD4O14678 606 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 GMDSO60547 372 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 KHDRBS3O75525 346 aaKnown RBP14.04□□□□□ -0.16
SNX17-204ENST00000453453 RENP00797 406 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 GMFBP60983 142 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 SIRPAP78324 504 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 H3F3AP84243 136 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 LGALS3BPQ08380 585 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 BTN1A1Q13410 526 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 CRMP1Q14194 572 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 TUSC1Q2TAM9 212 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 LEG1Q6P5S2 330 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 FAM180AQ6UWF9 173 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 TMUB2Q71RG4 321 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 SLC35D2Q76EJ3 337 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 PDZD9Q8IXQ8 264 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 KDM8Q8N371 416 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 DNAAF1Q8NEP3 725 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 SDR9C7Q8NEX9 313 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 S100A16Q96FQ6 103 aaKnown RBP14.04□□□□□ -0.16
SNX17-204ENST00000453453 TAAR6Q96RI8 345 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 SRXN1Q9BYN0 137 aa14.04□□□□□ -0.16
SNX17-204ENST00000453453 SLC25A32Q9H2D1 315 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms