RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 TRAP1Q12931 704 aaKnown RBP22.68■■□□□ 1.22
USP42-204ENST00000451154 FOXL1Q12952 345 aa22.68■■□□□ 1.22
USP42-204ENST00000451154 ECH1Q13011 328 aa22.68■■□□□ 1.22
USP42-204ENST00000451154 ZNF181Q2M3W8 571 aa22.68■■□□□ 1.22
USP42-204ENST00000451154 MCUR1Q96AQ8 359 aa22.68■■□□□ 1.22
USP42-204ENST00000451154 SLCO4A1Q96BD0 722 aa22.68■■□□□ 1.22
USP42-204ENST00000451154 NEIL1Q96FI4 390 aaPredicted RBP22.68■■□□□ 1.22
USP42-204ENST00000451154 PNRC2Q9NPJ4 139 aaKnown RBP22.68■■□□□ 1.22
USP42-204ENST00000451154 TRRAPQ9Y4A5 3859 aa22.67■■□□□ 1.22
USP42-204ENST00000451154 A0A1B0GWJ7 208 aa22.67■■□□□ 1.22
USP42-204ENST00000451154 IDH3BO43837 385 aa22.67■■□□□ 1.22
USP42-204ENST00000451154 HSD17B1P14061 328 aa22.67■■□□□ 1.22
USP42-204ENST00000451154 CPT2P23786 658 aa22.67■■□□□ 1.22
USP42-204ENST00000451154 RRM2P31350 389 aa22.67■■□□□ 1.22
USP42-204ENST00000451154 GSSP48637 474 aa22.67■■□□□ 1.22
USP42-204ENST00000451154 MAB21L1Q13394 359 aa22.67■■□□□ 1.22
USP42-204ENST00000451154 ZNF404Q494X3 552 aa22.67■■□□□ 1.22
USP42-204ENST00000451154 BTNL3Q6UXE8 466 aa22.67■■□□□ 1.22
USP42-204ENST00000451154 LRRN1Q6UXK5 716 aa22.67■■□□□ 1.22
USP42-204ENST00000451154 C1orf87Q8N0U7 546 aa22.67■■□□□ 1.22
USP42-204ENST00000451154 GNPDA2Q8TDQ7 276 aa22.67■■□□□ 1.22
USP42-204ENST00000451154 RAB40AQ8WXH6 277 aa22.67■■□□□ 1.22
USP42-204ENST00000451154 PLEKHA8Q96JA3 519 aa22.67■■□□□ 1.22
USP42-204ENST00000451154 MRPL22Q9NWU5 206 aaKnown RBP22.67■■□□□ 1.22
USP42-204ENST00000451154 CD300AQ9UGN4 299 aa22.67■■□□□ 1.22
USP42-204ENST00000451154 MAGEL2Q9UJ55 1249 aa22.67■■□□□ 1.22
USP42-204ENST00000451154 TMCC3Q9ULS5 477 aa22.67■■□□□ 1.22
USP42-204ENST00000451154 IGHV2-70DA0A0C4DH43 119 aa22.66■■□□□ 1.22
USP42-204ENST00000451154 FABP3P05413 133 aa22.66■■□□□ 1.22
USP42-204ENST00000451154 IFNGR2P38484 337 aa22.66■■□□□ 1.22
USP42-204ENST00000451154 KHDRBS1Q07666 443 aaKnown RBP eCLIP22.66■■□□□ 1.22
USP42-204ENST00000451154 MALLQ13021 153 aa22.66■■□□□ 1.22
USP42-204ENST00000451154 C19orf18Q8NEA5 215 aa22.66■■□□□ 1.22
USP42-204ENST00000451154 NSMCE2Q96MF7 247 aa22.66■■□□□ 1.22
USP42-204ENST00000451154 CDRT15Q96T59 188 aa22.66■■□□□ 1.22
USP42-204ENST00000451154 ZNF747Q9BV97 191 aa22.66■■□□□ 1.22
USP42-204ENST00000451154 PYCR1P32322 319 aa22.65■■□□□ 1.22
USP42-204ENST00000451154 CLEC12AQ5QGZ9 265 aa22.65■■□□□ 1.22
USP42-204ENST00000451154 LYPD2Q6UXB3 125 aa22.65■■□□□ 1.22
USP42-204ENST00000451154 ZNF620Q6ZNG0 422 aa22.65■■□□□ 1.22
USP42-204ENST00000451154 PGAP1Q75T13 922 aa22.65■■□□□ 1.22
USP42-204ENST00000451154 PARP8Q8N3A8 854 aa22.65■■□□□ 1.22
USP42-204ENST00000451154 OR8B3Q8NGG8 313 aa22.65■■□□□ 1.22
USP42-204ENST00000451154 SPRYD4Q8WW59 207 aaPredicted RBP22.65■■□□□ 1.22
USP42-204ENST00000451154 MAP6Q96JE9 813 aa22.65■■□□□ 1.22
USP42-204ENST00000451154 OR8B2Q96RD0 313 aa22.65■■□□□ 1.22
USP42-204ENST00000451154 NSRP1Q9H0G5 558 aaKnown RBP22.65■■□□□ 1.22
USP42-204ENST00000451154 EGLN3Q9H6Z9 239 aa22.65■■□□□ 1.22
USP42-204ENST00000451154 UFSP2Q9NUQ7 469 aa22.65■■□□□ 1.22
USP42-204ENST00000451154 ARPC2O15144 300 aa22.64■■□□□ 1.21
USP42-204ENST00000451154 SNX3O60493 162 aa22.64■■□□□ 1.21
USP42-204ENST00000451154 PPIAL4GP0DN37 164 aa22.64■■□□□ 1.21
USP42-204ENST00000451154 IRF2P14316 349 aa22.64■■□□□ 1.21
USP42-204ENST00000451154 RPS27P42677 84 aaKnown RBP22.64■■□□□ 1.21
USP42-204ENST00000451154 GATA4P43694 442 aa22.64■■□□□ 1.21
USP42-204ENST00000451154 PITPNBP48739 271 aa22.64■■□□□ 1.21
USP42-204ENST00000451154 TPTEP56180 551 aa22.64■■□□□ 1.21
USP42-204ENST00000451154 HOXA4Q00056 320 aaPredicted RBP22.64■■□□□ 1.21
USP42-204ENST00000451154 TSPAN31Q12999 210 aa22.64■■□□□ 1.21
USP42-204ENST00000451154 MPPED2Q15777 294 aa22.64■■□□□ 1.21
USP42-204ENST00000451154 SAMD4BQ5PRF9 694 aaKnown RBP22.64■■□□□ 1.21
USP42-204ENST00000451154 PRAMEF6Q5VXH4 476 aa22.64■■□□□ 1.21
USP42-204ENST00000451154 PGBD2Q6P3X8 592 aa22.64■■□□□ 1.21
USP42-204ENST00000451154 TAF15Q92804 592 aaKnown RBP eCLIP22.64■■□□□ 1.21
USP42-204ENST00000451154 DACT3Q96B18 629 aaPredicted RBP22.64■■□□□ 1.21
USP42-204ENST00000451154 UPRTQ96BW1 309 aa22.64■■□□□ 1.21
USP42-204ENST00000451154 IL1RAPQ9NPH3 570 aa22.64■■□□□ 1.21
USP42-204ENST00000451154 KIR2DS1A0A191URI9 304 aa22.63■■□□□ 1.21
USP42-204ENST00000451154 FAM20BO75063 409 aa22.63■■□□□ 1.21
USP42-204ENST00000451154 FSTL3O95633 263 aa22.63■■□□□ 1.21
USP42-204ENST00000451154 ZNF823P16415 610 aa22.63■■□□□ 1.21
USP42-204ENST00000451154 SLC9A3R2Q15599 337 aa22.63■■□□□ 1.21
USP42-204ENST00000451154 NLRC3Q7RTR2 1065 aa22.63■■□□□ 1.21
USP42-204ENST00000451154 ZDHHC21Q8IVQ6 265 aa22.63■■□□□ 1.21
USP42-204ENST00000451154 CELF2-AS1Q8N7Q2 184 aa22.63■■□□□ 1.21
USP42-204ENST00000451154 CYB561A3Q8NBI2 242 aa22.63■■□□□ 1.21
USP42-204ENST00000451154 OR10S1Q8NGN2 331 aa22.63■■□□□ 1.21
USP42-204ENST00000451154 ZNRF4Q8WWF5 429 aa22.63■■□□□ 1.21
USP42-204ENST00000451154 ZMAT3Q9HA38 289 aaKnown RBP22.63■■□□□ 1.21
USP42-204ENST00000451154 MEGF8Q7Z7M0 2845 aa22.63■■□□□ 1.21
USP42-204ENST00000451154 TVP23AA6NH52 213 aa22.62■■□□□ 1.21
USP42-204ENST00000451154 M0R135 149 aa22.62■■□□□ 1.21
USP42-204ENST00000451154 CA6P23280 308 aa22.62■■□□□ 1.21
USP42-204ENST00000451154 CD200P41217 278 aa22.62■■□□□ 1.21
USP42-204ENST00000451154 MTNR1AP48039 350 aa22.62■■□□□ 1.21
USP42-204ENST00000451154 OR8G1Q15617 311 aa22.62■■□□□ 1.21
USP42-204ENST00000451154 MRPL21Q7Z2W9 205 aaKnown RBP22.62■■□□□ 1.21
USP42-204ENST00000451154 PGAM4Q8N0Y7 254 aa22.62■■□□□ 1.21
USP42-204ENST00000451154 OR11L1Q8NGX0 322 aa22.62■■□□□ 1.21
USP42-204ENST00000451154 Q8TCH9 128 aa22.62■■□□□ 1.21
USP42-204ENST00000451154 SLC25A28Q96A46 364 aa22.62■■□□□ 1.21
USP42-204ENST00000451154 ZNF799Q96GE5 643 aa22.62■■□□□ 1.21
USP42-204ENST00000451154 DDOQ99489 341 aa22.62■■□□□ 1.21
USP42-204ENST00000451154 NUDT16L1Q9BRJ7 211 aaKnown RBP22.62■■□□□ 1.21
USP42-204ENST00000451154 CLN8Q9UBY8 286 aa22.62■■□□□ 1.21
USP42-204ENST00000451154 TMPRSS2O15393 492 aa22.61■■□□□ 1.21
USP42-204ENST00000451154 PLATP00750 562 aa22.61■■□□□ 1.21
USP42-204ENST00000451154 RNASE1P07998 156 aaKnown RBP22.61■■□□□ 1.21
USP42-204ENST00000451154 ANOS1P23352 680 aa22.61■■□□□ 1.21
USP42-204ENST00000451154 RAD23AP54725 363 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms