RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 SLC6A9P48067 706 aa12.87□□□□□ -0.35
CHD3-205ENST00000449744 MMP16P51512 607 aa12.87□□□□□ -0.35
CHD3-205ENST00000449744 CRMP1Q14194 572 aa12.87□□□□□ -0.35
CHD3-205ENST00000449744 GK3PQ14409 553 aa12.87□□□□□ -0.35
CHD3-205ENST00000449744 GK2Q14410 553 aaPredicted RBP12.87□□□□□ -0.35
CHD3-205ENST00000449744 PGAP1Q75T13 922 aa12.87□□□□□ -0.35
CHD3-205ENST00000449744 MRPL21Q7Z2W9 205 aaKnown RBP12.87□□□□□ -0.35
CHD3-205ENST00000449744 NAA40Q86UY6 237 aa12.87□□□□□ -0.35
CHD3-205ENST00000449744 LRRC28Q86X40 367 aaPredicted RBP12.87□□□□□ -0.35
CHD3-205ENST00000449744 MUC20Q8N307 709 aaPredicted RBP12.87□□□□□ -0.35
CHD3-205ENST00000449744 OR4Q3Q8NH05 313 aa12.87□□□□□ -0.35
CHD3-205ENST00000449744 ZNF420Q8TAQ5 688 aaPredicted RBP12.87□□□□□ -0.35
CHD3-205ENST00000449744 NANPQ8TBE9 248 aa12.87□□□□□ -0.35
CHD3-205ENST00000449744 SLCO4A1Q96BD0 722 aa12.87□□□□□ -0.35
CHD3-205ENST00000449744 CLPTM1LQ96KA5 538 aa12.87□□□□□ -0.35
CHD3-205ENST00000449744 SIGLEC11Q96RL6 698 aa12.87□□□□□ -0.35
CHD3-205ENST00000449744 C7orf69Q9H7B7 122 aa12.87□□□□□ -0.35
CHD3-205ENST00000449744 PATZ1Q9HBE1 687 aaKnown RBP12.87□□□□□ -0.35
CHD3-205ENST00000449744 GCM1Q9NP62 436 aa12.87□□□□□ -0.35
CHD3-205ENST00000449744 ARMC1Q9NVT9 282 aa12.87□□□□□ -0.35
CHD3-205ENST00000449744 TAS2R1Q9NYW7 299 aa12.87□□□□□ -0.35
CHD3-205ENST00000449744 CUBNO60494 3623 aa12.86□□□□□ -0.35
CHD3-205ENST00000449744 LRRC30A6NM36 301 aa12.86□□□□□ -0.35
CHD3-205ENST00000449744 RIIAD1A6NNX1 92 aa12.86□□□□□ -0.35
CHD3-205ENST00000449744 F5H5P2 479 aa12.86□□□□□ -0.35
CHD3-205ENST00000449744 GNGT2O14610 69 aa12.86□□□□□ -0.35
CHD3-205ENST00000449744 CST1P01037 141 aa12.86□□□□□ -0.35
CHD3-205ENST00000449744 EPHA1P21709 976 aa12.86□□□□□ -0.35
CHD3-205ENST00000449744 RBMXP38159 391 aaKnown RBP12.86□□□□□ -0.35
CHD3-205ENST00000449744 MDH2P40926 338 aaKnown RBP12.86□□□□□ -0.35
CHD3-205ENST00000449744 ENTPD1P49961 510 aa12.86□□□□□ -0.35
CHD3-205ENST00000449744 RAD23AP54725 363 aa12.86□□□□□ -0.35
CHD3-205ENST00000449744 PRSS12P56730 875 aa12.86□□□□□ -0.35
CHD3-205ENST00000449744 ZMYND11Q15326 602 aa12.86□□□□□ -0.35
CHD3-205ENST00000449744 TAF13Q15543 124 aa12.86□□□□□ -0.35
CHD3-205ENST00000449744 ZNF362Q5T0B9 420 aaPredicted RBP12.86□□□□□ -0.35
CHD3-205ENST00000449744 C1orf229Q6ZS94 237 aaPredicted RBP12.86□□□□□ -0.35
CHD3-205ENST00000449744 DCXRQ7Z4W1 244 aa12.86□□□□□ -0.35
CHD3-205ENST00000449744 C1QL2Q7Z5L3 287 aa12.86□□□□□ -0.35
CHD3-205ENST00000449744 OR6K6Q8NGW6 343 aa12.86□□□□□ -0.35
CHD3-205ENST00000449744 TEX47Q8TBZ9 253 aa12.86□□□□□ -0.35
CHD3-205ENST00000449744 GIPC3Q8TF64 312 aa12.86□□□□□ -0.35
CHD3-205ENST00000449744 SPRYD4Q8WW59 207 aaPredicted RBP12.86□□□□□ -0.35
CHD3-205ENST00000449744 ZNRF4Q8WWF5 429 aa12.86□□□□□ -0.35
CHD3-205ENST00000449744 COPS4Q9BT78 406 aa12.86□□□□□ -0.35
CHD3-205ENST00000449744 CHID1Q9BWS9 393 aa12.86□□□□□ -0.35
CHD3-205ENST00000449744 CENPMQ9NSP4 180 aa12.86□□□□□ -0.35
CHD3-205ENST00000449744 COMMD3-BMI1R4GMX3 469 aa12.86□□□□□ -0.35
CHD3-205ENST00000449744 PPIAL4EA0A075B759 164 aa12.85□□□□□ -0.35
CHD3-205ENST00000449744 PPIAL4CA0A0B4J2A2 164 aa12.85□□□□□ -0.35
CHD3-205ENST00000449744 IGHV3-64DA0A0J9YX35 117 aa12.85□□□□□ -0.35
CHD3-205ENST00000449744 PPIAL4DF5H284 164 aa12.85□□□□□ -0.35
CHD3-205ENST00000449744 H3BN98 237 aa12.85□□□□□ -0.35
CHD3-205ENST00000449744 MLNRO43193 412 aa12.85□□□□□ -0.35
CHD3-205ENST00000449744 CYB5R3P00387 301 aaPredicted RBP12.85□□□□□ -0.35
CHD3-205ENST00000449744 HLA-DPB1P04440 258 aa12.85□□□□□ -0.35
CHD3-205ENST00000449744 GYPBP06028 91 aa12.85□□□□□ -0.35
CHD3-205ENST00000449744 PPIAL4FP0DN26 164 aa12.85□□□□□ -0.35
CHD3-205ENST00000449744 IRF2P14316 349 aa12.85□□□□□ -0.35
CHD3-205ENST00000449744 ZNF3P17036 446 aa12.85□□□□□ -0.35
CHD3-205ENST00000449744 SPI1P17947 270 aa12.85□□□□□ -0.35
CHD3-205ENST00000449744 ADRA2CP18825 462 aa12.85□□□□□ -0.35
CHD3-205ENST00000449744 BLVRAP53004 296 aa12.85□□□□□ -0.35
CHD3-205ENST00000449744 SLC25A1P53007 311 aa12.85□□□□□ -0.35
CHD3-205ENST00000449744 ESCO2Q56NI9 601 aa12.85□□□□□ -0.35
CHD3-205ENST00000449744 LYPD4Q6UWN0 246 aa12.85□□□□□ -0.35
CHD3-205ENST00000449744 DRAM2Q6UX65 266 aa12.85□□□□□ -0.35
CHD3-205ENST00000449744 MOGAT3Q86VF5 341 aa12.85□□□□□ -0.35
CHD3-205ENST00000449744 C1orf87Q8N0U7 546 aa12.85□□□□□ -0.35
CHD3-205ENST00000449744 ZNF511Q8NB15 262 aa12.85□□□□□ -0.35
CHD3-205ENST00000449744 OR10S1Q8NGN2 331 aa12.85□□□□□ -0.35
CHD3-205ENST00000449744 RBM4Q9BWF3 364 aaKnown RBP12.85□□□□□ -0.35
CHD3-205ENST00000449744 DDX28Q9NUL7 540 aaKnown RBP12.85□□□□□ -0.35
CHD3-205ENST00000449744 NOP16Q9Y3C1 178 aaKnown RBP12.85□□□□□ -0.35
CHD3-205ENST00000449744 DHRS12A0PJE2 317 aa12.84□□□□□ -0.35
CHD3-205ENST00000449744 GGT3PA6NGU5 568 aa12.84□□□□□ -0.35
CHD3-205ENST00000449744 AQP12BA6NM10 295 aa12.84□□□□□ -0.35
CHD3-205ENST00000449744 ZNF593O00488 134 aaPredicted RBP12.84□□□□□ -0.35
CHD3-205ENST00000449744 RGS9O75916 674 aaPredicted RBP12.84□□□□□ -0.35
CHD3-205ENST00000449744 ZNF205O95201 554 aa12.84□□□□□ -0.35
CHD3-205ENST00000449744 VENTXO95231 258 aa12.84□□□□□ -0.35
CHD3-205ENST00000449744 ZFP36P26651 326 aaKnown RBP12.84□□□□□ -0.35
CHD3-205ENST00000449744 PRKXP51817 358 aa12.84□□□□□ -0.35
CHD3-205ENST00000449744 CD300LDQ6UXZ3 194 aa12.84□□□□□ -0.35
CHD3-205ENST00000449744 AQP12AQ8IXF9 295 aa12.84□□□□□ -0.35
CHD3-205ENST00000449744 ADGRG5Q8IZF4 528 aa12.84□□□□□ -0.35
CHD3-205ENST00000449744 OR11L1Q8NGX0 322 aa12.84□□□□□ -0.35
CHD3-205ENST00000449744 OTULINQ96BN8 352 aa12.84□□□□□ -0.35
CHD3-205ENST00000449744 SLAMF6Q96DU3 332 aa12.84□□□□□ -0.35
CHD3-205ENST00000449744 JMJD8Q96S16 334 aa12.84□□□□□ -0.35
CHD3-205ENST00000449744 FEVQ99581 238 aa12.84□□□□□ -0.35
CHD3-205ENST00000449744 KCNJ15Q99712 375 aa12.84□□□□□ -0.35
CHD3-205ENST00000449744 NIPSNAP1Q9BPW8 284 aa12.84□□□□□ -0.35
CHD3-205ENST00000449744 NMNAT2Q9BZQ4 307 aa12.84□□□□□ -0.35
CHD3-205ENST00000449744 SLC22A4Q9H015 551 aa12.84□□□□□ -0.35
CHD3-205ENST00000449744 CMC2Q9NRP2 79 aa12.84□□□□□ -0.35
CHD3-205ENST00000449744 OR5V1Q9UGF6 321 aa12.84□□□□□ -0.35
CHD3-205ENST00000449744 N6AMT1Q9Y5N5 214 aa12.84□□□□□ -0.35
CHD3-205ENST00000449744 CD300LBA8K4G0 201 aa12.83□□□□□ -0.36
CHD3-205ENST00000449744 CEACAM18A8MTB9 384 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms