RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 ZNF84P51523 738 aa10.3□□□□□ -0.76
AC004540.1-204ENST00000449537 ACTR3P61158 418 aa10.3□□□□□ -0.76
AC004540.1-204ENST00000449537 HOXC5Q00444 222 aa10.3□□□□□ -0.76
AC004540.1-204ENST00000449537 ZNF181Q2M3W8 571 aa10.3□□□□□ -0.76
AC004540.1-204ENST00000449537 RPS26P11Q5JNZ5 115 aaPredicted RBP10.3□□□□□ -0.76
AC004540.1-204ENST00000449537 GLYATQ6IB77 296 aa10.3□□□□□ -0.76
AC004540.1-204ENST00000449537 ARL9Q6T311 187 aa10.3□□□□□ -0.76
AC004540.1-204ENST00000449537 RNF148Q8N7C7 305 aa10.3□□□□□ -0.76
AC004540.1-204ENST00000449537 AKR7LQ8NHP1 331 aa10.3□□□□□ -0.76
AC004540.1-204ENST00000449537 NSMAFQ92636 917 aa10.3□□□□□ -0.76
AC004540.1-204ENST00000449537 CMBLQ96DG6 245 aa10.3□□□□□ -0.76
AC004540.1-204ENST00000449537 SLC25A44Q96H78 314 aaPredicted RBP10.3□□□□□ -0.76
AC004540.1-204ENST00000449537 CHID1Q9BWS9 393 aa10.3□□□□□ -0.76
AC004540.1-204ENST00000449537 MAGIXQ9H6Y5 334 aa10.3□□□□□ -0.76
AC004540.1-204ENST00000449537 RNPEPL1Q9HAU8 725 aa10.3□□□□□ -0.76
AC004540.1-204ENST00000449537 DCAF13Q9NV06 445 aaKnown RBP10.3□□□□□ -0.76
AC004540.1-204ENST00000449537 POMPQ9Y244 141 aa10.3□□□□□ -0.76
AC004540.1-204ENST00000449537 IGKV1D-42A0A075B6H8 117 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 C11orf98E9PRG8 122 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 H3BUX3 64 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 ACOT8O14734 319 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 ICMTO60725 284 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 OR6A2O95222 327 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 PF4P02776 101 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 BGLAPP02818 100 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 ADORA3P0DMS8 318 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 PF4V1P10720 104 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 ZNF32P17041 273 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 KITLGP21583 273 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 TUBG1P23258 451 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 AQP1P29972 269 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 SRP9P49458 86 aaKnown RBP10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 SELENOWP63302 87 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 PSG4Q00888 419 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 CYBRD1Q53TN4 286 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 NKAPLQ5M9Q1 402 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 SLC35D2Q76EJ3 337 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 VMO1Q7Z5L0 202 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 MOGAT3Q86VF5 341 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 RANBP3LQ86VV4 465 aaPredicted RBP10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 ALDH16A1Q8IZ83 802 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 C10orf53Q8N6V4 93 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 Q8NFD4 153 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 TAMM41Q96BW9 452 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 MEGF10Q96KG7 1140 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 EPYCQ99645 322 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 NPFFR1Q9GZQ6 430 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 FAM234AQ9H0X4 552 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 VCX3BQ9H321 246 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 YY1AP1Q9H869 796 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 SIAEQ9HAT2 523 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 RAB18Q9NP72 206 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 TUBG2Q9NRH3 451 aa10.29□□□□□ -0.76
AC004540.1-204ENST00000449537 A0A1B0GVI7 797 aa10.28□□□□□ -0.76
AC004540.1-204ENST00000449537 A0A1W2PRX2 142 aa10.28□□□□□ -0.76
AC004540.1-204ENST00000449537 M0QX08 132 aa10.28□□□□□ -0.76
AC004540.1-204ENST00000449537 SERPINA1P01009 418 aa10.28□□□□□ -0.76
AC004540.1-204ENST00000449537 IRF2P14316 349 aa10.28□□□□□ -0.76
AC004540.1-204ENST00000449537 ZNF26P17031 533 aaPredicted RBP10.28□□□□□ -0.76
AC004540.1-204ENST00000449537 CD247P20963 164 aa10.28□□□□□ -0.76
AC004540.1-204ENST00000449537 IFNA8P32881 189 aa10.28□□□□□ -0.76
AC004540.1-204ENST00000449537 GUCA2AQ02747 115 aa10.28□□□□□ -0.76
AC004540.1-204ENST00000449537 GK3PQ14409 553 aa10.28□□□□□ -0.76
AC004540.1-204ENST00000449537 LY6EQ16553 131 aa10.28□□□□□ -0.76
AC004540.1-204ENST00000449537 FAM98BQ52LJ0 330 aaKnown RBP10.28□□□□□ -0.76
AC004540.1-204ENST00000449537 IFI44LQ53G44 452 aa10.28□□□□□ -0.76
AC004540.1-204ENST00000449537 SWT1Q5T5J6 900 aaKnown RBP10.28□□□□□ -0.76
AC004540.1-204ENST00000449537 IGFN1Q86VF2 1251 aa10.28□□□□□ -0.76
AC004540.1-204ENST00000449537 FAM156AQ8NDB6 213 aa10.28□□□□□ -0.76
AC004540.1-204ENST00000449537 DNAJA4Q8WW22 397 aaPredicted RBP10.28□□□□□ -0.76
AC004540.1-204ENST00000449537 MCHR2Q969V1 340 aa10.28□□□□□ -0.76
AC004540.1-204ENST00000449537 HAVCR1Q96D42 359 aa10.28□□□□□ -0.76
AC004540.1-204ENST00000449537 MOGAT1Q96PD6 335 aa10.28□□□□□ -0.76
AC004540.1-204ENST00000449537 ASCL2Q99929 193 aa10.28□□□□□ -0.76
AC004540.1-204ENST00000449537 GPR61Q9BZJ8 451 aa10.28□□□□□ -0.76
AC004540.1-204ENST00000449537 PCDHAC1Q9H158 963 aa10.28□□□□□ -0.76
AC004540.1-204ENST00000449537 CHST2Q9Y4C5 530 aa10.28□□□□□ -0.76
AC004540.1-204ENST00000449537 HYDINQ4G0P3 5121 aa10.27□□□□□ -0.77
AC004540.1-204ENST00000449537 IGHV3-64DA0A0J9YX35 117 aa10.27□□□□□ -0.77
AC004540.1-204ENST00000449537 A0A1W2PRD5 423 aa10.27□□□□□ -0.77
AC004540.1-204ENST00000449537 A0A1W2PRF3 423 aa10.27□□□□□ -0.77
AC004540.1-204ENST00000449537 A0A1W2PRM7 423 aa10.27□□□□□ -0.77
AC004540.1-204ENST00000449537 TCRBV3S1A0A5B6 114 aa10.27□□□□□ -0.77
AC004540.1-204ENST00000449537 NPFFO15130 113 aa10.27□□□□□ -0.77
AC004540.1-204ENST00000449537 ZNF682O95780 498 aa10.27□□□□□ -0.77
AC004540.1-204ENST00000449537 IFNW1P05000 195 aa10.27□□□□□ -0.77
AC004540.1-204ENST00000449537 PGA4P0DJD7 388 aa10.27□□□□□ -0.77
AC004540.1-204ENST00000449537 PGA3P0DJD8 388 aa10.27□□□□□ -0.77
AC004540.1-204ENST00000449537 ATP6V1B2P21281 511 aa10.27□□□□□ -0.77
AC004540.1-204ENST00000449537 PMELP40967 661 aa10.27□□□□□ -0.77
AC004540.1-204ENST00000449537 RGS8P57771 180 aaPredicted RBP10.27□□□□□ -0.77
AC004540.1-204ENST00000449537 CLRN1P58418 232 aa10.27□□□□□ -0.77
AC004540.1-204ENST00000449537 RCN1Q15293 331 aa10.27□□□□□ -0.77
AC004540.1-204ENST00000449537 CDONQ4KMG0 1287 aa10.27□□□□□ -0.77
AC004540.1-204ENST00000449537 METAP1DQ6UB28 335 aaPredicted RBP10.27□□□□□ -0.77
AC004540.1-204ENST00000449537 SPATA24Q86W54 205 aa10.27□□□□□ -0.77
AC004540.1-204ENST00000449537 NPEPL1Q8NDH3 523 aa10.27□□□□□ -0.77
AC004540.1-204ENST00000449537 C19orf18Q8NEA5 215 aa10.27□□□□□ -0.77
AC004540.1-204ENST00000449537 RBMXL1Q96E39 390 aaKnown RBP10.27□□□□□ -0.77
AC004540.1-204ENST00000449537 SSX3Q99909 188 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms