RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 NKX6-1P78426 367 aaPredicted RBP12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 RHEBQ15382 184 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 TMEM31Q5JXX7 168 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 TMPRSS12Q86WS5 348 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 ZNF664Q8N3J9 261 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 NAXEQ8NCW5 288 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 ZG16BQ96DA0 208 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 MACROD1Q9BQ69 325 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 SLC17A5Q9NRA2 495 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 APOBEC3BQ9UH17 382 aaKnown RBP12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 POMT1Q9Y6A1 747 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 A0A1B0GWA3 101 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 SRPX2O60687 465 aaPredicted RBP12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 LRP3O75074 770 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 IL33O95760 270 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 GPR75O95800 540 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 CRYABP02511 175 aaKnown RBP12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 SPARCP09486 303 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 RPS4Y1P22090 263 aaKnown RBP12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 DUSP2Q05923 314 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 CCDC3Q9BQI4 270 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 OR14J1Q9UGF5 321 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 MTCH2Q9Y6C9 303 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 ELOA3CA0A087WX78 387 aaPredicted RBP12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 SMCO3A2RU48 225 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 TMEM212A6NML5 194 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 TNFRSF10CO14798 259 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 DCNP07585 359 aaKnown RBP12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 GABRG2P18507 467 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 FGF7P21781 194 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 PSMB6P28072 239 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 MSX1P28360 303 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 MAS1LP35410 378 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 VN1R4Q7Z5H5 301 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 CD300LFQ8TDQ1 290 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 GALNT14Q96FL9 552 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 PACRGQ96M98 296 aaPredicted RBP12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 SNHG12Q9BXW3 62 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 SYT4Q9H2B2 425 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 Q9N2J8 555 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 USP36Q9P275 1121 aaKnown RBP12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 STEAP1Q9UHE8 339 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 MYO9BQ13459 2157 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 A0A0B4J2E0 115 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 A0A1B0GX12 115 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 HIST1H2BKO60814 126 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 PLGP00747 810 aaPredicted RBP12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 IGLV3-19P01714 112 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 HIST1H2BJP06899 126 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 RAB6AP20340 208 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 SLC2A5P22732 501 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 HIST1H2BOP23527 126 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 HIST1H2BBP33778 126 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 HIST1H2BDP58876 126 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 HIST1H2BCP62807 126 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 LTBQ06643 244 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 HIST2H2BEQ16778 126 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 TMEM205Q6UW68 189 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 BTNL8Q6UX41 500 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 C5orf24Q7Z6I8 188 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 RFLNBQ8N5W9 214 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 ZCCHC10Q8TBK6 192 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 HIST1H2BHQ93079 126 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 TM4SF19Q96DZ7 209 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 HIST1H2BNQ99877 126 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 HIST1H2BMQ99879 126 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 GPR27Q9NS67 375 aa12.09□□□□□ -0.47
SYNGAP1-204ENST00000449372 C2CD4DB7Z1M9 353 aa12.08□□□□□ -0.47
SYNGAP1-204ENST00000449372 RPL36A-HNRNPH2H7BZ11 118 aa12.08□□□□□ -0.47
SYNGAP1-204ENST00000449372 EIF1AYO14602 144 aaKnown RBP12.08□□□□□ -0.47
SYNGAP1-204ENST00000449372 CRHP06850 196 aa12.08□□□□□ -0.47
SYNGAP1-204ENST00000449372 OR8U9P0C7N5 309 aa12.08□□□□□ -0.47
SYNGAP1-204ENST00000449372 PNMTP11086 282 aa12.08□□□□□ -0.47
SYNGAP1-204ENST00000449372 EIF1AXP47813 144 aaKnown RBP12.08□□□□□ -0.47
SYNGAP1-204ENST00000449372 DHPSP49366 369 aaPredicted RBP12.08□□□□□ -0.47
SYNGAP1-204ENST00000449372 TAS2R19P59542 299 aa12.08□□□□□ -0.47
SYNGAP1-204ENST00000449372 SLC16A9Q7RTY1 509 aa12.08□□□□□ -0.47
SYNGAP1-204ENST00000449372 OR8U1Q8NH10 309 aa12.08□□□□□ -0.47
SYNGAP1-204ENST00000449372 FAM212BQ9NTI7 297 aaPredicted RBP12.08□□□□□ -0.47
SYNGAP1-204ENST00000449372 FLVCR1Q9Y5Y0 555 aa12.08□□□□□ -0.47
SYNGAP1-204ENST00000449372 F5P12259 2224 aa12.08□□□□□ -0.48
SYNGAP1-204ENST00000449372 BLACEA4D250 179 aa12.08□□□□□ -0.48
SYNGAP1-204ENST00000449372 MEGF11A6BM72 1044 aa12.08□□□□□ -0.48
SYNGAP1-204ENST00000449372 TMEM235A6NFC5 223 aa12.08□□□□□ -0.48
SYNGAP1-204ENST00000449372 P2RX6O15547 441 aa12.08□□□□□ -0.48
SYNGAP1-204ENST00000449372 TNFSF14O43557 240 aa12.08□□□□□ -0.48
SYNGAP1-204ENST00000449372 PTBP3O95758 552 aaKnown RBP12.08□□□□□ -0.48
SYNGAP1-204ENST00000449372 STATHP02808 62 aa12.08□□□□□ -0.48
SYNGAP1-204ENST00000449372 S1PR1P21453 382 aa12.08□□□□□ -0.48
SYNGAP1-204ENST00000449372 HNRNPA2B1P22626 353 aaKnown RBP12.08□□□□□ -0.48
SYNGAP1-204ENST00000449372 CLN3Q13286 438 aa12.08□□□□□ -0.48
SYNGAP1-204ENST00000449372 HNF4GQ14541 408 aa12.08□□□□□ -0.48
SYNGAP1-204ENST00000449372 SLC10A1Q14973 349 aa12.08□□□□□ -0.48
SYNGAP1-204ENST00000449372 LSRQ86X29 649 aaPredicted RBP12.08□□□□□ -0.48
SYNGAP1-204ENST00000449372 WDR92Q96MX6 357 aa12.08□□□□□ -0.48
SYNGAP1-204ENST00000449372 PRODH2Q9UF12 536 aa12.08□□□□□ -0.48
SYNGAP1-204ENST00000449372 IL17BQ9UHF5 180 aa12.08□□□□□ -0.48
SYNGAP1-204ENST00000449372 KCNG2Q9UJ96 466 aa12.08□□□□□ -0.48
SYNGAP1-204ENST00000449372 C5orf51A6NDU8 294 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms