RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 CR1LQ2VPA4 569 aa11.88□□□□□ -0.51
RTFDC1-204ENST00000449062 ASRGL1Q7L266 308 aa11.88□□□□□ -0.51
RTFDC1-204ENST00000449062 TIGD4Q8IY51 512 aa11.88□□□□□ -0.51
RTFDC1-204ENST00000449062 ZNF283Q8N7M2 679 aa11.88□□□□□ -0.51
RTFDC1-204ENST00000449062 OR2Z1Q8NG97 314 aa11.88□□□□□ -0.51
RTFDC1-204ENST00000449062 OR13G1Q8NGZ3 307 aa11.88□□□□□ -0.51
RTFDC1-204ENST00000449062 RAB1CQ92928 201 aa11.88□□□□□ -0.51
RTFDC1-204ENST00000449062 SIGLEC11Q96RL6 698 aa11.88□□□□□ -0.51
RTFDC1-204ENST00000449062 REPIN1Q9BWE0 567 aaKnown RBP11.88□□□□□ -0.51
RTFDC1-204ENST00000449062 SHARPINQ9H0F6 387 aa11.88□□□□□ -0.51
RTFDC1-204ENST00000449062 NARFLQ9H6Q4 476 aa11.88□□□□□ -0.51
RTFDC1-204ENST00000449062 SLC25A19Q9HC21 320 aa11.88□□□□□ -0.51
RTFDC1-204ENST00000449062 ARHGAP32A7KAX9 2087 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 CLDN25C9JDP6 229 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 M0R135 149 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 MLNRO43193 412 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 GLCEO94923 617 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 IGHV2-5P01817 119 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 ZNF3P17036 446 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 GSTT1P30711 240 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 PRSS12P56730 875 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 EFNB1P98172 346 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 ATP6AP1Q15904 470 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 SNAI3Q3KNW1 292 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 TMEM236Q5W0B7 351 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 DRAM2Q6UX65 266 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 RHOUQ7L0Q8 258 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 PRSS45Q7RTY3 260 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 DPY19L4Q7Z388 723 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 CPOQ8IVL8 374 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 OR5AS1Q8N127 324 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 PARP8Q8N3A8 854 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 RNF133Q8WVZ7 376 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 ITLN1Q8WWA0 313 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 SPTSSAQ969W0 71 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 SLAMF6Q96DU3 332 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 ZNF799Q96GE5 643 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 ZNF582Q96NG8 517 aaPredicted RBP11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 AMELYQ99218 206 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 KCNJ15Q99712 375 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 ABHD6Q9BV23 337 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 ZNF665Q9H7R5 613 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 GCM1Q9NP62 436 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 TMEM106BQ9NUM4 274 aa11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 TMEFF2Q9UIK5 374 aaPredicted RBP11.87□□□□□ -0.51
RTFDC1-204ENST00000449062 IGHV2-70P01814 119 aa11.86□□□□□ -0.51
RTFDC1-204ENST00000449062 MSMBP08118 114 aa11.86□□□□□ -0.51
RTFDC1-204ENST00000449062 SPARCP09486 303 aa11.86□□□□□ -0.51
RTFDC1-204ENST00000449062 TNFRSF1AP19438 455 aa11.86□□□□□ -0.51
RTFDC1-204ENST00000449062 SLC2A5P22732 501 aa11.86□□□□□ -0.51
RTFDC1-204ENST00000449062 PMELP40967 661 aa11.86□□□□□ -0.51
RTFDC1-204ENST00000449062 CRISP1P54107 249 aa11.86□□□□□ -0.51
RTFDC1-204ENST00000449062 ZNF92Q03936 586 aa11.86□□□□□ -0.51
RTFDC1-204ENST00000449062 SLC3A1Q07837 685 aa11.86□□□□□ -0.51
RTFDC1-204ENST00000449062 MAB21L1Q13394 359 aa11.86□□□□□ -0.51
RTFDC1-204ENST00000449062 PLBD1Q6P4A8 553 aa11.86□□□□□ -0.51
RTFDC1-204ENST00000449062 IL17RELQ6ZVW7 336 aa11.86□□□□□ -0.51
RTFDC1-204ENST00000449062 LRRC28Q86X40 367 aaPredicted RBP11.86□□□□□ -0.51
RTFDC1-204ENST00000449062 OR6K6Q8NGW6 343 aa11.86□□□□□ -0.51
RTFDC1-204ENST00000449062 OR5K1Q8NHB7 308 aa11.86□□□□□ -0.51
RTFDC1-204ENST00000449062 DNAJC9Q8WXX5 260 aa11.86□□□□□ -0.51
RTFDC1-204ENST00000449062 TMEM186Q96B77 213 aa11.86□□□□□ -0.51
RTFDC1-204ENST00000449062 OR2V2Q96R30 315 aa11.86□□□□□ -0.51
RTFDC1-204ENST00000449062 ZNF556Q9HAH1 456 aa11.86□□□□□ -0.51
RTFDC1-204ENST00000449062 AP4S1Q9Y587 144 aa11.86□□□□□ -0.51
RTFDC1-204ENST00000449062 NPTNQ9Y639 398 aa11.86□□□□□ -0.51
RTFDC1-204ENST00000449062 DYSFO75923 2080 aa11.86□□□□□ -0.51
RTFDC1-204ENST00000449062 CD300LBA8K4G0 201 aa11.85□□□□□ -0.51
RTFDC1-204ENST00000449062 TMEM178BH3BS89 294 aa11.85□□□□□ -0.51
RTFDC1-204ENST00000449062 PLPP2O43688 288 aa11.85□□□□□ -0.51
RTFDC1-204ENST00000449062 SELEP16581 610 aa11.85□□□□□ -0.51
RTFDC1-204ENST00000449062 TNFSF4P23510 183 aa11.85□□□□□ -0.51
RTFDC1-204ENST00000449062 EPHA2P29317 976 aa11.85□□□□□ -0.51
RTFDC1-204ENST00000449062 OPRL1P41146 370 aa11.85□□□□□ -0.51
RTFDC1-204ENST00000449062 PRKXP51817 358 aa11.85□□□□□ -0.51
RTFDC1-204ENST00000449062 C1orf229Q6ZS94 237 aaPredicted RBP11.85□□□□□ -0.51
RTFDC1-204ENST00000449062 ATG16L2Q8NAA4 619 aa11.85□□□□□ -0.51
RTFDC1-204ENST00000449062 BBS1Q8NFJ9 593 aa11.85□□□□□ -0.51
RTFDC1-204ENST00000449062 SPSB4Q96A44 273 aa11.85□□□□□ -0.51
RTFDC1-204ENST00000449062 TIMD4Q96H15 378 aa11.85□□□□□ -0.51
RTFDC1-204ENST00000449062 MEGF10Q96KG7 1140 aa11.85□□□□□ -0.51
RTFDC1-204ENST00000449062 INTS14Q96SY0 518 aa11.85□□□□□ -0.51
RTFDC1-204ENST00000449062 OR51V1Q9H2C8 321 aa11.85□□□□□ -0.51
RTFDC1-204ENST00000449062 G6PC2Q9NQR9 355 aa11.85□□□□□ -0.51
RTFDC1-204ENST00000449062 CENPMQ9NSP4 180 aa11.85□□□□□ -0.51
RTFDC1-204ENST00000449062 TMEM100Q9NV29 134 aa11.85□□□□□ -0.51
RTFDC1-204ENST00000449062 HIF1ANQ9NWT6 349 aa11.85□□□□□ -0.51
RTFDC1-204ENST00000449062 ZNF319Q9P2F9 582 aa11.85□□□□□ -0.51
RTFDC1-204ENST00000449062 PPP1R3CQ9UQK1 317 aa11.85□□□□□ -0.51
RTFDC1-204ENST00000449062 PRR23D1E9PI22 279 aaPredicted RBP11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 F5H5P2 479 aa11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 PRODHO43272 600 aa11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 MITFO75030 526 aaPredicted RBP11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 PTBP3O95758 552 aaKnown RBP11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 AVPP01185 164 aa11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 IFNA2P01563 188 aa11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 HLA-DPB1P04440 258 aa11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 PRR23D2P0DMB1 279 aaPredicted RBP11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 ZFP36P26651 326 aaKnown RBP11.84□□□□□ -0.51
RTFDC1-204ENST00000449062 GATA4P43694 442 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms