RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 KDM4DQ6B0I6 523 aa12.41□□□□□ -0.42
USP39-206ENST00000448971 DPY19L4Q7Z388 723 aa12.41□□□□□ -0.42
USP39-206ENST00000448971 C10orf67Q8IYJ2 551 aa12.41□□□□□ -0.42
USP39-206ENST00000448971 ZNF786Q8N393 782 aa12.41□□□□□ -0.42
USP39-206ENST00000448971 ZNF540Q8NDQ6 660 aa12.41□□□□□ -0.42
USP39-206ENST00000448971 BBS1Q8NFJ9 593 aa12.41□□□□□ -0.42
USP39-206ENST00000448971 OR10S1Q8NGN2 331 aa12.41□□□□□ -0.42
USP39-206ENST00000448971 RDH5Q92781 318 aa12.41□□□□□ -0.42
USP39-206ENST00000448971 CMBLQ96DG6 245 aa12.41□□□□□ -0.42
USP39-206ENST00000448971 PKP2Q99959 881 aa12.41□□□□□ -0.42
USP39-206ENST00000448971 RIBC2Q9H4K1 309 aa12.41□□□□□ -0.42
USP39-206ENST00000448971 MSL2Q9HCI7 577 aa12.41□□□□□ -0.42
USP39-206ENST00000448971 DDX28Q9NUL7 540 aaKnown RBP12.41□□□□□ -0.42
USP39-206ENST00000448971 PURGQ9UJV8 347 aaKnown RBP12.41□□□□□ -0.42
USP39-206ENST00000448971 H3BNX3 289 aa12.4□□□□□ -0.42
USP39-206ENST00000448971 M0R129 80 aa12.4□□□□□ -0.42
USP39-206ENST00000448971 SELENOFO60613 162 aa12.4□□□□□ -0.42
USP39-206ENST00000448971 IGHV1-46P01743 117 aa12.4□□□□□ -0.42
USP39-206ENST00000448971 LCATP04180 440 aa12.4□□□□□ -0.42
USP39-206ENST00000448971 ACHEP22303 614 aa12.4□□□□□ -0.42
USP39-206ENST00000448971 USF1P22415 310 aaPredicted RBP12.4□□□□□ -0.42
USP39-206ENST00000448971 HSD11B1P28845 292 aa12.4□□□□□ -0.42
USP39-206ENST00000448971 LIPAP38571 399 aa12.4□□□□□ -0.42
USP39-206ENST00000448971 MMP15P51511 669 aa12.4□□□□□ -0.42
USP39-206ENST00000448971 MALLQ13021 153 aa12.4□□□□□ -0.42
USP39-206ENST00000448971 PSG7Q13046 419 aa12.4□□□□□ -0.42
USP39-206ENST00000448971 APOFQ13790 326 aa12.4□□□□□ -0.42
USP39-206ENST00000448971 HLXQ14774 488 aaPredicted RBP12.4□□□□□ -0.42
USP39-206ENST00000448971 SLC35D3Q5M8T2 416 aa12.4□□□□□ -0.42
USP39-206ENST00000448971 CYB5R2Q6BCY4 276 aa12.4□□□□□ -0.42
USP39-206ENST00000448971 SHFQ7M4L6 423 aa12.4□□□□□ -0.42
USP39-206ENST00000448971 OR5AS1Q8N127 324 aa12.4□□□□□ -0.42
USP39-206ENST00000448971 PTP4A1Q93096 173 aa12.4□□□□□ -0.42
USP39-206ENST00000448971 RBM4BQ9BQ04 359 aaKnown RBP12.4□□□□□ -0.42
USP39-206ENST00000448971 CHODLQ9H9P2 273 aa12.4□□□□□ -0.42
USP39-206ENST00000448971 ORC6Q9Y5N6 252 aa12.4□□□□□ -0.42
USP39-206ENST00000448971 ZAR1LA6NP61 321 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 VWC2LB2RUY7 222 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 EI24O14681 340 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 CDC14BO60729 498 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 IGHV4-31P0DP07 118 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 RAC2P15153 192 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 KITLGP21583 273 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 SLC15A1P46059 708 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 GPR6P46095 362 aaPredicted RBP12.39□□□□□ -0.43
USP39-206ENST00000448971 PRKXP51817 358 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 GRB2P62993 217 aaKnown RBP12.39□□□□□ -0.43
USP39-206ENST00000448971 PCK2Q16822 640 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 KRTAP27-1Q3LI81 207 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 TEX30Q5JUR7 227 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 FAM209AQ5JX71 171 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 SLX4IPQ5VYV7 408 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 FBXW12Q6X9E4 464 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 USP51Q70EK9 711 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 MRPL21Q7Z2W9 205 aaKnown RBP12.39□□□□□ -0.43
USP39-206ENST00000448971 TIGD4Q8IY51 512 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 ZNF283Q8N7M2 679 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 BHLHE23Q8NDY6 225 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 ST7LQ8TDW4 575 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 STMN2Q93045 179 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 DIRC2Q96SL1 478 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 KCNJ15Q99712 375 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 OCSTAMPQ9BR26 566 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 C19orf24Q9BVV8 132 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 C1QTNF5Q9BXJ0 243 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 EGLN1Q9GZT9 426 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 MARCH7Q9H992 704 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 NKIRAS2Q9NYR9 191 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 LPAR3Q9UBY5 353 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 TMEFF2Q9UIK5 374 aaPredicted RBP12.39□□□□□ -0.43
USP39-206ENST00000448971 N6AMT1Q9Y5N5 214 aa12.39□□□□□ -0.43
USP39-206ENST00000448971 IGHV4-61A0A0C4DH41 118 aa12.38□□□□□ -0.43
USP39-206ENST00000448971 IGHV1-69-2A0A0G2JMI3 117 aa12.38□□□□□ -0.43
USP39-206ENST00000448971 PRKYO43930 277 aa12.38□□□□□ -0.43
USP39-206ENST00000448971 LYNP07948 512 aa12.38□□□□□ -0.43
USP39-206ENST00000448971 MRPL3P09001 348 aaKnown RBP12.38□□□□□ -0.43
USP39-206ENST00000448971 SLC2A1P11166 492 aa12.38□□□□□ -0.43
USP39-206ENST00000448971 ZNF16P17020 682 aaPredicted RBP12.38□□□□□ -0.43
USP39-206ENST00000448971 SLC2A5P22732 501 aa12.38□□□□□ -0.43
USP39-206ENST00000448971 TNFSF4P23510 183 aa12.38□□□□□ -0.43
USP39-206ENST00000448971 EPHA2P29317 976 aa12.38□□□□□ -0.43
USP39-206ENST00000448971 CX3CR1P49238 355 aa12.38□□□□□ -0.43
USP39-206ENST00000448971 TNFAIP6P98066 277 aaPredicted RBP12.38□□□□□ -0.43
USP39-206ENST00000448971 SRSF2Q01130 221 aaKnown RBP12.38□□□□□ -0.43
USP39-206ENST00000448971 C12orf73Q69YU5 71 aa12.38□□□□□ -0.43
USP39-206ENST00000448971 OR2T2Q6IF00 324 aa12.38□□□□□ -0.43
USP39-206ENST00000448971 DRAM2Q6UX65 266 aa12.38□□□□□ -0.43
USP39-206ENST00000448971 TCEANCQ8N8B7 351 aa12.38□□□□□ -0.43
USP39-206ENST00000448971 OR2Z1Q8NG97 314 aa12.38□□□□□ -0.43
USP39-206ENST00000448971 YIPF5Q969M3 257 aa12.38□□□□□ -0.43
USP39-206ENST00000448971 HAVCR1Q96D42 359 aa12.38□□□□□ -0.43
USP39-206ENST00000448971 ELMOD3Q96FG2 381 aa12.38□□□□□ -0.43
USP39-206ENST00000448971 ABHD6Q9BV23 337 aa12.38□□□□□ -0.43
USP39-206ENST00000448971 OSBPL10Q9BXB5 764 aa12.38□□□□□ -0.43
USP39-206ENST00000448971 GABARAPL3Q9BY60 117 aa12.38□□□□□ -0.43
USP39-206ENST00000448971 SHARPINQ9H0F6 387 aa12.38□□□□□ -0.43
USP39-206ENST00000448971 S100A14Q9HCY8 104 aa12.38□□□□□ -0.43
USP39-206ENST00000448971 ZNF275Q9NSD4 429 aaPredicted RBP12.38□□□□□ -0.43
USP39-206ENST00000448971 DNAJC27Q9NZQ0 273 aa12.38□□□□□ -0.43
USP39-206ENST00000448971 ZDHHC8Q9ULC8 765 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms