RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 SLC1A7O00341 560 aa11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 ZNF593O00488 134 aaPredicted RBP11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 UBL3O95164 117 aa11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 OR8G3PP0DMU2 310 aa11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 IL2RGP31785 369 aa11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 MTNR1AP48039 350 aa11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 ENTPD1P49961 510 aa11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 RAB1AP62820 205 aa11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 MRPS11P82912 194 aaKnown RBP11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 MVKQ03426 396 aa11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 SCGB2A2Q13296 93 aa11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 MED21Q13503 144 aa11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 KCNMB1Q16558 191 aa11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 FAM27BQ5VT28 67 aa11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 TMEM154Q6P9G4 183 aa11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 CFAP77Q6ZQR2 320 aa11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 RDH5Q92781 318 aa11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 RFKQ969G6 155 aa11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 Q96MT0 163 aa11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 AMELYQ99218 206 aa11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 CNN2Q99439 309 aaKnown RBP11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 MRPL37Q9BZE1 423 aaKnown RBP11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 SIAEQ9HAT2 523 aa11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 PAK1IP1Q9NWT1 392 aaPredicted RBP11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 KCNG2Q9UJ96 466 aa11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 COPS3Q9UNS2 423 aa11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 WNK2Q9Y3S1 2297 aa11.76□□□□□ -0.53
PDLIM2-213ENST00000448520 PRR32B1ATL7 298 aa11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 RER1O15258 196 aa11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 RAB36O95755 333 aa11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 SBK2P0C263 348 aa11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 ZNF823P16415 610 aa11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 ZNF32P17041 273 aa11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 ACHEP22303 614 aa11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 SLC15A1P46059 708 aa11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 GPR6P46095 362 aaPredicted RBP11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 SELENOVP59797 346 aa11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 ELFN2Q5R3F8 820 aa11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 SLC18B1Q6NT16 456 aa11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 AHSA2Q719I0 299 aa11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 SPATC1Q76KD6 591 aa11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 SSX6Q7RTT6 188 aa11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 DPY19L4Q7Z388 723 aa11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 SLC35F2Q8IXU6 374 aa11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 OR52I1Q8NGK6 324 aa11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 AKR7LQ8NHP1 331 aa11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 GGHQ92820 318 aa11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 MS4A3Q96HJ5 214 aa11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 MAP6Q96JE9 813 aa11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 TPK1Q9H3S4 243 aa11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 ASH2LQ9UBL3 628 aa11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 GPR160Q9UJ42 338 aa11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 MYRFQ9Y2G1 1151 aa11.75□□□□□ -0.53
PDLIM2-213ENST00000448520 ANK2Q01484 3957 aa11.74□□□□□ -0.53
PDLIM2-213ENST00000448520 LYNX1G3V0Z9 82 aa11.74□□□□□ -0.53
PDLIM2-213ENST00000448520 MAGEB4O15481 346 aaPredicted RBP11.74□□□□□ -0.53
PDLIM2-213ENST00000448520 FARS2O95363 451 aaKnown RBP11.74□□□□□ -0.53
PDLIM2-213ENST00000448520 SERPINA5P05154 406 aa11.74□□□□□ -0.53
PDLIM2-213ENST00000448520 CST2P09228 141 aa11.74□□□□□ -0.53
PDLIM2-213ENST00000448520 MMP7P09237 267 aaPredicted RBP11.74□□□□□ -0.53
PDLIM2-213ENST00000448520 LYNX1P0DP58 116 aa11.74□□□□□ -0.53
PDLIM2-213ENST00000448520 COL8A2P25067 703 aa11.74□□□□□ -0.53
PDLIM2-213ENST00000448520 ATP6V1E1P36543 226 aa11.74□□□□□ -0.53
PDLIM2-213ENST00000448520 GUCA1AP43080 201 aaPredicted RBP11.74□□□□□ -0.53
PDLIM2-213ENST00000448520 EIF2B1Q14232 305 aaKnown RBP11.74□□□□□ -0.53
PDLIM2-213ENST00000448520 SLC16A14Q7RTX9 510 aa11.74□□□□□ -0.53
PDLIM2-213ENST00000448520 SLC16A9Q7RTY1 509 aa11.74□□□□□ -0.53
PDLIM2-213ENST00000448520 GLCCI1Q86VQ1 547 aa11.74□□□□□ -0.53
PDLIM2-213ENST00000448520 OR10H4Q8NGA5 316 aa11.74□□□□□ -0.53
PDLIM2-213ENST00000448520 OR10S1Q8NGN2 331 aa11.74□□□□□ -0.53
PDLIM2-213ENST00000448520 ZFAND2BQ8WV99 257 aa11.74□□□□□ -0.53
PDLIM2-213ENST00000448520 SYT3Q9BQG1 590 aa11.74□□□□□ -0.53
PDLIM2-213ENST00000448520 HAO2Q9NYQ3 351 aa11.74□□□□□ -0.53
PDLIM2-213ENST00000448520 PSORS1C1Q9UIG5 152 aa11.74□□□□□ -0.53
PDLIM2-213ENST00000448520 GRIP1Q9Y3R0 1128 aa11.74□□□□□ -0.53
PDLIM2-213ENST00000448520 RPL36Q9Y3U8 105 aaKnown RBP11.74□□□□□ -0.53
PDLIM2-213ENST00000448520 C12orf71A8MTZ7 269 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 PTGES3LE9PB15 166 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 PSMD9O00233 223 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 PTHP01270 115 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 HPXP02790 462 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 CRHBPP24387 322 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 BLVRAP53004 296 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 LSM6P62312 80 aaKnown RBP11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 PSG4Q00888 419 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 ZNF85Q03923 595 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 TMED1Q13445 227 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 PCK2Q16822 640 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 MSMPQ1L6U9 139 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 CCDC92Q53HC0 331 aaPredicted RBP11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 ZNF774Q6NX45 483 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 DCXRQ7Z4W1 244 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 DPPA2Q7Z7J5 298 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 TEX29Q8N6K0 151 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 THEM6Q8WUY1 208 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 TMEM186Q96B77 213 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 ABHD6Q9BV23 337 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 CDADC1Q9BWV3 514 aa11.73□□□□□ -0.53
PDLIM2-213ENST00000448520 OR2H1Q9GZK4 316 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms