RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 NECAP1Q8NC96 275 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 RTN4IP1Q8WWV3 396 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-204ENST00000448183 C19orf43Q9BQ61 176 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 S1PR5Q9H228 398 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 SLC35D1Q9NTN3 355 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 OBP2AQ9NY56 170 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 IGLV3-27P01718 113 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 TBXA2RP21731 343 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 RRADP55042 308 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 TAS2R45P59539 299 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 RBPJQ06330 500 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 OR8B8Q15620 311 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 NKG7Q16617 165 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 NKAIN1Q4KMZ8 207 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 AGBL4Q5VU57 503 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 NKAIN2Q5VXU1 208 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 SIGIRRQ6IA17 410 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 GLDNQ6ZMI3 551 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-204ENST00000448183 PRSS42Q7Z5A4 293 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 SIGLECL1Q8N7X8 197 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 ANKRD53Q8N9V6 530 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 OR52B4Q8NGK2 314 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 ST8SIA1Q92185 356 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 CDCP1Q9H5V8 836 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 ZNF355PQ9NSJ1 428 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 KCNG2Q9UJ96 466 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 SH3BGRL2Q9UJC5 107 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 TIMM10BQ9Y5J6 103 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 SLC17A2O00624 439 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 DVL1O14640 695 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 AQP8O94778 261 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 TSPAN12O95859 305 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 F10P00742 488 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 ACSM4P0C7M7 580 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 COX5AP20674 150 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 ZP3P21754 424 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 CYB561P49447 251 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 DVL1P1P54792 670 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-204ENST00000448183 RAC1P63000 192 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 ACOT6Q3I5F7 207 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-204ENST00000448183 C4orf17Q53FE4 359 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 C12orf73Q69YU5 71 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 XAF1Q6GPH4 301 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 LHFPL2Q6ZUX7 228 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 BTLAQ7Z6A9 289 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 CISD2Q8N5K1 135 aaKnown RBP7.06□□□□□ -1.28
NEDD9-204ENST00000448183 DTWD2Q8NBA8 298 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 CMTM3Q96MX0 182 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 WDFY2Q96P53 400 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 VPS25Q9BRG1 176 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 SOX7Q9BT81 388 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 ZNF385DQ9H6B1 395 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 RHOFQ9HBH0 211 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 DLL4Q9NR61 685 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 NUP98P52948 1817 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 IGHV3-20A0A0C4DH32 117 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 KLRC4-KLRK1H3BQV0 150 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 PYCARD-AS1I3L0S3 204 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 CT45A10P0DMU9 189 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 SPP1P10451 314 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 BAMBIQ13145 260 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 TMEM128Q5BJH2 165 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 FAM162BQ5T6X4 162 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 NCR3LG1Q68D85 454 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 OR2T2Q6IF00 324 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 CLEC9AQ6UXN8 241 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 LINC00696Q6ZRV3 163 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 BATF2Q8N1L9 274 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 ARHGEF39Q8N4T4 335 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 TMEM229BQ8NBD8 167 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 TMEM178AQ8NBL3 297 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 RDH5Q92781 318 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 NXPE3Q969Y0 559 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 SAT2Q96F10 170 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-204ENST00000448183 FER1L6-AS2Q96M78 137 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 CTDSP1Q9GZU7 261 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 C12orf10Q9HB07 376 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 LANCL2Q9NS86 450 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 MRPL22Q9NWU5 206 aaKnown RBP7.06□□□□□ -1.28
NEDD9-204ENST00000448183 TJP1Q07157 1748 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 SEC14L6B5MCN3 397 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 RAB27BO00194 218 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 GPR31O00270 319 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 NRASP01111 189 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 PRR35P0CG20 571 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 RD3LP0DJH9 198 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 PIGPP57054 158 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 FABP9Q0Z7S8 132 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 IL10RAQ13651 578 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 LAIR1Q6GTX8 287 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 C11orf87Q6NUJ2 197 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 ARRDC1Q8N5I2 433 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 COMMD1Q8N668 190 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 VN1R2Q8NFZ6 395 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 C16orf52Q8NHV5 167 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 BAHD1Q8TBE0 780 aaPredicted RBP7.05□□□□□ -1.28
NEDD9-204ENST00000448183 H1FXQ92522 213 aaKnown RBP7.05□□□□□ -1.28
NEDD9-204ENST00000448183 GINS3Q9BRX5 216 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 IFT22Q9H7X7 185 aa7.05□□□□□ -1.28
NEDD9-204ENST00000448183 LIN7CQ9NUP9 197 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms