RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 LILRA1O75019 489 aa12.6□□□□□ -0.39
HDAC4-204ENST00000446876 IGHV4-31P0DP07 118 aa12.6□□□□□ -0.39
HDAC4-204ENST00000446876 RAC2P15153 192 aa12.6□□□□□ -0.39
HDAC4-204ENST00000446876 HOXB4P17483 251 aaPredicted RBP12.6□□□□□ -0.39
HDAC4-204ENST00000446876 TUBG1P23258 451 aa12.6□□□□□ -0.39
HDAC4-204ENST00000446876 IL2RGP31785 369 aa12.6□□□□□ -0.39
HDAC4-204ENST00000446876 OTX1P32242 354 aaPredicted RBP12.6□□□□□ -0.39
HDAC4-204ENST00000446876 POLR2IP36954 125 aaKnown RBP12.6□□□□□ -0.39
HDAC4-204ENST00000446876 RIPPLY3P57055 190 aa12.6□□□□□ -0.39
HDAC4-204ENST00000446876 PPP2R2BQ00005 443 aa12.6□□□□□ -0.39
HDAC4-204ENST00000446876 TAF13Q15543 124 aa12.6□□□□□ -0.39
HDAC4-204ENST00000446876 SLX4IPQ5VYV7 408 aa12.6□□□□□ -0.39
HDAC4-204ENST00000446876 BHLHE23Q8NDY6 225 aa12.6□□□□□ -0.39
HDAC4-204ENST00000446876 OR2Z1Q8NG97 314 aa12.6□□□□□ -0.39
HDAC4-204ENST00000446876 SOX7Q9BT81 388 aa12.6□□□□□ -0.39
HDAC4-204ENST00000446876 RIBC2Q9H4K1 309 aa12.6□□□□□ -0.39
HDAC4-204ENST00000446876 YAE1D1Q9NRH1 226 aa12.6□□□□□ -0.39
HDAC4-204ENST00000446876 TUBG2Q9NRH3 451 aa12.6□□□□□ -0.39
HDAC4-204ENST00000446876 CYSLTR2Q9NS75 346 aa12.6□□□□□ -0.39
HDAC4-204ENST00000446876 KLHDC2Q9Y2U9 406 aa12.6□□□□□ -0.39
HDAC4-204ENST00000446876 MALRD1Q5VYJ5 2156 aa12.6□□□□□ -0.39
HDAC4-204ENST00000446876 DYSFO75923 2080 aa12.6□□□□□ -0.39
HDAC4-204ENST00000446876 IGHV1-69-2A0A0G2JMI3 117 aa12.59□□□□□ -0.39
HDAC4-204ENST00000446876 PPIHO43447 177 aaKnown RBP12.59□□□□□ -0.39
HDAC4-204ENST00000446876 MRPL3P09001 348 aaKnown RBP12.59□□□□□ -0.39
HDAC4-204ENST00000446876 GPR6P46095 362 aaPredicted RBP12.59□□□□□ -0.39
HDAC4-204ENST00000446876 HCCSP53701 268 aa12.59□□□□□ -0.39
HDAC4-204ENST00000446876 TNFAIP6P98066 277 aaPredicted RBP12.59□□□□□ -0.39
HDAC4-204ENST00000446876 CDK5R2Q13319 367 aa12.59□□□□□ -0.39
HDAC4-204ENST00000446876 GK2Q14410 553 aaPredicted RBP12.59□□□□□ -0.39
HDAC4-204ENST00000446876 FAM209AQ5JX71 171 aa12.59□□□□□ -0.39
HDAC4-204ENST00000446876 AVPI1Q5T686 147 aa12.59□□□□□ -0.39
HDAC4-204ENST00000446876 C12orf73Q69YU5 71 aa12.59□□□□□ -0.39
HDAC4-204ENST00000446876 ZFP1Q6P2D0 407 aa12.59□□□□□ -0.39
HDAC4-204ENST00000446876 ZNF283Q8N7M2 679 aa12.59□□□□□ -0.39
HDAC4-204ENST00000446876 TCEANCQ8N8B7 351 aa12.59□□□□□ -0.39
HDAC4-204ENST00000446876 ZNF540Q8NDQ6 660 aa12.59□□□□□ -0.39
HDAC4-204ENST00000446876 OR10AD1Q8NGE0 317 aa12.59□□□□□ -0.39
HDAC4-204ENST00000446876 OR2AE1Q8NHA4 323 aa12.59□□□□□ -0.39
HDAC4-204ENST00000446876 ELMOD3Q96FG2 381 aa12.59□□□□□ -0.39
HDAC4-204ENST00000446876 RAB3IPQ96QF0 476 aaPredicted RBP12.59□□□□□ -0.39
HDAC4-204ENST00000446876 KCNJ15Q99712 375 aa12.59□□□□□ -0.39
HDAC4-204ENST00000446876 OSBPL10Q9BXB5 764 aa12.59□□□□□ -0.39
HDAC4-204ENST00000446876 DNAJC27Q9NZQ0 273 aa12.59□□□□□ -0.39
HDAC4-204ENST00000446876 CGGBP1Q9UFW8 167 aaPredicted RBP12.59□□□□□ -0.39
HDAC4-204ENST00000446876 HIVEP2P31629 2446 aa12.59□□□□□ -0.39
HDAC4-204ENST00000446876 SONP18583 2426 aaKnown RBP12.58□□□□□ -0.4
HDAC4-204ENST00000446876 H0YL77 283 aa12.58□□□□□ -0.4
HDAC4-204ENST00000446876 EI24O14681 340 aa12.58□□□□□ -0.4
HDAC4-204ENST00000446876 TLX2O43763 284 aaPredicted RBP12.58□□□□□ -0.4
HDAC4-204ENST00000446876 ADH4P08319 380 aa12.58□□□□□ -0.4
HDAC4-204ENST00000446876 TACSTD2P09758 323 aa12.58□□□□□ -0.4
HDAC4-204ENST00000446876 LIPAP38571 399 aa12.58□□□□□ -0.4
HDAC4-204ENST00000446876 CRYBB2P43320 205 aa12.58□□□□□ -0.4
HDAC4-204ENST00000446876 CX3CR1P49238 355 aa12.58□□□□□ -0.4
HDAC4-204ENST00000446876 MRPS11P82912 194 aaKnown RBP12.58□□□□□ -0.4
HDAC4-204ENST00000446876 ZMAT1Q5H9K5 638 aa12.58□□□□□ -0.4
HDAC4-204ENST00000446876 SLC35D3Q5M8T2 416 aa12.58□□□□□ -0.4
HDAC4-204ENST00000446876 GLYATL3Q5SZD4 288 aa12.58□□□□□ -0.4
HDAC4-204ENST00000446876 C6orf52Q5T4I8 152 aa12.58□□□□□ -0.4
HDAC4-204ENST00000446876 SHFQ7M4L6 423 aa12.58□□□□□ -0.4
HDAC4-204ENST00000446876 THEM6Q8WUY1 208 aa12.58□□□□□ -0.4
HDAC4-204ENST00000446876 RNF133Q8WVZ7 376 aa12.58□□□□□ -0.4
HDAC4-204ENST00000446876 IL4I1Q96RQ9 567 aa12.58□□□□□ -0.4
HDAC4-204ENST00000446876 DCAF16Q9NXF7 216 aa12.58□□□□□ -0.4
HDAC4-204ENST00000446876 ZDHHC8Q9ULC8 765 aa12.58□□□□□ -0.4
HDAC4-204ENST00000446876 IGHV3-64DA0A0J9YX35 117 aa12.57□□□□□ -0.4
HDAC4-204ENST00000446876 IQCF6A8MYZ5 107 aa12.57□□□□□ -0.4
HDAC4-204ENST00000446876 CD55P08174 381 aa12.57□□□□□ -0.4
HDAC4-204ENST00000446876 HSD11B1P28845 292 aa12.57□□□□□ -0.4
HDAC4-204ENST00000446876 OPRL1P41146 370 aa12.57□□□□□ -0.4
HDAC4-204ENST00000446876 CHN2P52757 468 aa12.57□□□□□ -0.4
HDAC4-204ENST00000446876 GRB2P62993 217 aaKnown RBP12.57□□□□□ -0.4
HDAC4-204ENST00000446876 MVKQ03426 396 aa12.57□□□□□ -0.4
HDAC4-204ENST00000446876 ZNF92Q03936 586 aa12.57□□□□□ -0.4
HDAC4-204ENST00000446876 MALLQ13021 153 aa12.57□□□□□ -0.4
HDAC4-204ENST00000446876 CYB5R2Q6BCY4 276 aa12.57□□□□□ -0.4
HDAC4-204ENST00000446876 DRAM2Q6UX65 266 aa12.57□□□□□ -0.4
HDAC4-204ENST00000446876 PGAP1Q75T13 922 aa12.57□□□□□ -0.4
HDAC4-204ENST00000446876 MRPL21Q7Z2W9 205 aaKnown RBP12.57□□□□□ -0.4
HDAC4-204ENST00000446876 OR8G5Q8NG78 346 aa12.57□□□□□ -0.4
HDAC4-204ENST00000446876 CLDND2Q8NHS1 167 aa12.57□□□□□ -0.4
HDAC4-204ENST00000446876 OTOSQ8NHW6 89 aa12.57□□□□□ -0.4
HDAC4-204ENST00000446876 ITLN1Q8WWA0 313 aa12.57□□□□□ -0.4
HDAC4-204ENST00000446876 CCL17Q92583 94 aa12.57□□□□□ -0.4
HDAC4-204ENST00000446876 MSI2Q96DH6 328 aaKnown RBP12.57□□□□□ -0.4
HDAC4-204ENST00000446876 ZNF582Q96NG8 517 aaPredicted RBP12.57□□□□□ -0.4
HDAC4-204ENST00000446876 TEAD3Q99594 435 aa12.57□□□□□ -0.4
HDAC4-204ENST00000446876 RBM4BQ9BQ04 359 aaKnown RBP12.57□□□□□ -0.4
HDAC4-204ENST00000446876 GABARAPL3Q9BY60 117 aa12.57□□□□□ -0.4
HDAC4-204ENST00000446876 TTTY10Q9BZA0 68 aa12.57□□□□□ -0.4
HDAC4-204ENST00000446876 PRRG3Q9BZD7 231 aa12.57□□□□□ -0.4
HDAC4-204ENST00000446876 EGLN1Q9GZT9 426 aa12.57□□□□□ -0.4
HDAC4-204ENST00000446876 S100A14Q9HCY8 104 aa12.57□□□□□ -0.4
HDAC4-204ENST00000446876 NF1P21359 2839 aa12.57□□□□□ -0.4
HDAC4-204ENST00000446876 MLNRO43193 412 aa12.56□□□□□ -0.4
HDAC4-204ENST00000446876 TBX1O43435 398 aa12.56□□□□□ -0.4
HDAC4-204ENST00000446876 HLA-DPB1P04440 258 aa12.56□□□□□ -0.4
HDAC4-204ENST00000446876 ANXA2P07355 339 aaKnown RBP12.56□□□□□ -0.4
HDAC4-204ENST00000446876 LYNP07948 512 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms