RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 RNF166Q96A37 237 aaPredicted RBP6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 LYZL4Q96KX0 146 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 C4orf45Q96LM5 186 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 SIGLEC11Q96RL6 698 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 KCNJ15Q99712 375 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 PDCD1LG2Q9BQ51 273 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 MND1Q9BWT6 205 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 MROQ9BYG7 248 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 HDHD2Q9H0R4 259 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 UBTD1Q9HAC8 227 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 ACOT13Q9NPJ3 140 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 MRPS18AQ9NVS2 196 aaKnown RBP6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 MYEF2Q9P2K5 600 aaKnown RBP6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 OR52A1Q9UKL2 312 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 ERGIC3Q9Y282 383 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 TMEM14AQ9Y6G1 99 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 NCOA6Q14686 2063 aaPredicted RBP6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 INTS1Q8N201 2190 aaKnown RBP6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 TRBV2A0A0J9YWF9 115 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 A0A1W2PPR1 153 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 IRGMA1A4Y4 181 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 SMIM30A4D0T7 59 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 WIPF3A6NGB9 483 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 DEFB108AA8MXU0 73 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 SMPD2O60906 423 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 LILRA1O75019 489 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 IGKV3-15P01624 115 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 MT-ND5P03915 603 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 COX6B1P14854 86 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 AGAP20933 346 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 PCMT1P22061 227 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 THBS4P35443 961 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 GBX2P52951 348 aaPredicted RBP6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 TPTEP56180 551 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 GABARAPL2P60520 117 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 LSM3P62310 102 aaKnown RBP6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 RPS25P62851 125 aaKnown RBP6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 ZNF92Q03936 586 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 IRF3Q14653 427 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 TIGD6Q17RP2 521 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 KCTD21Q4G0X4 260 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 ZNF684Q5T5D7 378 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 TMPRSS11AQ6ZMR5 421 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 PRSS48Q7RTY5 328 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 DMRTC2Q8IXT2 367 aaPredicted RBP6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 OR51A4Q8NGJ6 313 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 SLC25A40Q8TBP6 338 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 NPRL2Q8WTW4 380 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 ASB17Q8WXJ9 295 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 OPALINQ96PE5 141 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 DCLRE1CQ96SD1 692 aaKnown RBP6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 DOK1Q99704 481 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 COQ7Q99807 217 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 OR2J1Q9GZK6 312 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 PBOV1Q9GZY1 135 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 ZNF696Q9H7X3 374 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 FAM206AQ9NX38 181 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 FRRS1LQ9P0K9 344 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 DUSP13Q9UII6 198 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 ST6GALNAC2Q9UJ37 374 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 LSM2Q9Y333 95 aaKnown RBP6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 PCDHGB1Q9Y5G3 927 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 R4GMQ9 66 aa6.52□□□□□ -1.37
SF3A3P1-201ENST00000446317 MAGEA13PA6NCF6 341 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 E7EQL1 145 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 PHYHO14832 338 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 SRSF10O75494 262 aaKnown RBP6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 ATE1O95260 518 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 IGLV1-44P01699 117 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 CRYAAP02489 173 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 CD3EP07766 207 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 ZNF35P13682 527 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 CELP19835 753 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 TGFBR1P36897 503 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 GP2P55259 537 aaKnown RBP6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 WNT4P56705 351 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 ARPC4P59998 168 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 PSMA6P60900 246 aaKnown RBP6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 PPP1CBP62140 327 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 ACTA2P62736 377 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 GRB2P62993 217 aaKnown RBP6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 ACTG2P63267 376 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 CSNK2BP67870 215 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 SORDQ00796 357 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 EGR3Q06889 387 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 SPHARQ15513 63 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 SWI5Q1ZZU3 235 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 ARMCX4Q5H9R4 360 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 NCMAPQ5T1S8 102 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 OR2T2Q6IF00 324 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 TMEM108Q6UXF1 575 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 SYT9Q86SS6 491 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 TMEM200AQ86VY9 491 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 CATSPERDQ86XM0 798 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 BATF2Q8N1L9 274 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 ZCCHC24Q8N2G6 241 aaKnown RBP6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 ZNF676Q8N7Q3 588 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 ZBTB8BQ8NAP8 495 aaPredicted RBP6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 PLPP7Q8NBV4 271 aa6.51□□□□□ -1.37
SF3A3P1-201ENST00000446317 IL17RDQ8NFM7 739 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms