RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 OR51B6Q9H340 312 aa11.37□□□□□ -0.59
TIMP1-204ENST00000445623 ZNF442Q9H7R0 627 aa11.37□□□□□ -0.59
TIMP1-204ENST00000445623 BRD7Q9NPI1 651 aa11.37□□□□□ -0.59
TIMP1-204ENST00000445623 ACOXLQ9NUZ1 547 aa11.37□□□□□ -0.59
TIMP1-204ENST00000445623 PAK1IP1Q9NWT1 392 aaPredicted RBP11.37□□□□□ -0.59
TIMP1-204ENST00000445623 ERVK-18Q9QC07 812 aa11.37□□□□□ -0.59
TIMP1-204ENST00000445623 GTF2A1LQ9UNN4 478 aa11.37□□□□□ -0.59
TIMP1-204ENST00000445623 ADGRG4Q8IZF6 3080 aa11.37□□□□□ -0.59
TIMP1-204ENST00000445623 FAM221AA4D161 298 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 H3BSA7 217 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 MAGEB4O15481 346 aaPredicted RBP11.36□□□□□ -0.59
TIMP1-204ENST00000445623 TBX1O43435 398 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 XRCC2O43543 280 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 CTAG2O75638 210 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 MT-ND2P03891 347 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 HTR1AP08908 422 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 SLC2A1P11166 492 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 GCH1P30793 250 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 WNT4P56705 351 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 SELENOVP59797 346 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 PPP1CBP62140 327 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 NKX6-1P78426 367 aaPredicted RBP11.36□□□□□ -0.59
TIMP1-204ENST00000445623 MVKQ03426 396 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 TLE4Q04727 773 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 HGFACQ04756 655 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 ZNF718Q3SXZ3 478 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 ZNF672Q499Z4 452 aaPredicted RBP11.36□□□□□ -0.59
TIMP1-204ENST00000445623 BCL2L15Q5TBC7 163 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 COLCA1Q6ZS62 124 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 RFPL4BQ6ZWI9 263 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 FAM57BQ71RH2 274 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 TMEM200AQ86VY9 491 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 ZNF101Q8IZC7 436 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 SPRYD4Q8WW59 207 aaPredicted RBP11.36□□□□□ -0.59
TIMP1-204ENST00000445623 AKAP1Q92667 903 aaKnown RBP eCLIP11.36□□□□□ -0.59
TIMP1-204ENST00000445623 FBXW5Q969U6 566 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 MARVELD3Q96A59 401 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 CLEC4MQ9H2X3 399 aaPredicted RBP11.36□□□□□ -0.59
TIMP1-204ENST00000445623 RGCCQ9H4X1 137 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 OPA3Q9H6K4 179 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 TRIM36Q9NQ86 728 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 CA10Q9NS85 328 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 FAIMQ9NVQ4 179 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 FAM206AQ9NX38 181 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 CISD1Q9NZ45 108 aaKnown RBP11.36□□□□□ -0.59
TIMP1-204ENST00000445623 ZNF391Q9UJN7 358 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 CMAHPQ9Y471 501 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 N6AMT1Q9Y5N5 214 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 CADP27708 2225 aa11.36□□□□□ -0.59
TIMP1-204ENST00000445623 ATE1O95260 518 aa11.35□□□□□ -0.59
TIMP1-204ENST00000445623 PLAUP00749 431 aa11.35□□□□□ -0.59
TIMP1-204ENST00000445623 NGFP01138 241 aa11.35□□□□□ -0.59
TIMP1-204ENST00000445623 CFL1P23528 166 aaKnown RBP11.35□□□□□ -0.59
TIMP1-204ENST00000445623 TAS2R43P59537 309 aa11.35□□□□□ -0.59
TIMP1-204ENST00000445623 TBCEQ15813 527 aaPredicted RBP11.35□□□□□ -0.59
TIMP1-204ENST00000445623 TIGD6Q17RP2 521 aa11.35□□□□□ -0.59
TIMP1-204ENST00000445623 CCDC58Q4VC31 144 aa11.35□□□□□ -0.59
TIMP1-204ENST00000445623 OR2G6Q5TZ20 316 aa11.35□□□□□ -0.59
TIMP1-204ENST00000445623 VHLLQ6RSH7 139 aa11.35□□□□□ -0.59
TIMP1-204ENST00000445623 NAA40Q86UY6 237 aa11.35□□□□□ -0.59
TIMP1-204ENST00000445623 NANOGP1Q8N7R0 232 aa11.35□□□□□ -0.59
TIMP1-204ENST00000445623 SGCDQ92629 289 aa11.35□□□□□ -0.59
TIMP1-204ENST00000445623 PELI1Q96FA3 418 aa11.35□□□□□ -0.59
TIMP1-204ENST00000445623 SIGLEC11Q96RL6 698 aa11.35□□□□□ -0.59
TIMP1-204ENST00000445623 DHRS9Q9BPW9 319 aa11.35□□□□□ -0.59
TIMP1-204ENST00000445623 PBOV1Q9GZY1 135 aa11.35□□□□□ -0.59
TIMP1-204ENST00000445623 ISG20L2Q9H9L3 353 aaKnown RBP11.35□□□□□ -0.59
TIMP1-204ENST00000445623 BABAM2Q9NXR7 383 aa11.35□□□□□ -0.59
TIMP1-204ENST00000445623 NUFIP1Q9UHK0 495 aaKnown RBP11.35□□□□□ -0.59
TIMP1-204ENST00000445623 CLEC2DQ9UHP7 191 aa11.35□□□□□ -0.59
TIMP1-204ENST00000445623 OR52A1Q9UKL2 312 aa11.35□□□□□ -0.59
TIMP1-204ENST00000445623 RTTNQ86VV8 2226 aa11.35□□□□□ -0.59
TIMP1-204ENST00000445623 COL12A1Q99715 3063 aa11.34□□□□□ -0.59
TIMP1-204ENST00000445623 E7EQL1 145 aa11.34□□□□□ -0.59
TIMP1-204ENST00000445623 HS3ST1O14792 307 aa11.34□□□□□ -0.59
TIMP1-204ENST00000445623 GPRIN2O60269 458 aa11.34□□□□□ -0.59
TIMP1-204ENST00000445623 SRSF10O75494 262 aaKnown RBP11.34□□□□□ -0.59
TIMP1-204ENST00000445623 RPSAP08865 295 aaKnown RBP11.34□□□□□ -0.59
TIMP1-204ENST00000445623 ADRA2AP08913 450 aa11.34□□□□□ -0.59
TIMP1-204ENST00000445623 APOBEC3AP31941 199 aaPredicted RBP11.34□□□□□ -0.59
TIMP1-204ENST00000445623 THBS4P35443 961 aa11.34□□□□□ -0.59
TIMP1-204ENST00000445623 TGM4P49221 684 aa11.34□□□□□ -0.59
TIMP1-204ENST00000445623 FABP6P51161 128 aa11.34□□□□□ -0.59
TIMP1-204ENST00000445623 CCR9P51686 369 aa11.34□□□□□ -0.59
TIMP1-204ENST00000445623 MFGE8Q08431 387 aaPredicted RBP11.34□□□□□ -0.59
TIMP1-204ENST00000445623 IRF3Q14653 427 aa11.34□□□□□ -0.59
TIMP1-204ENST00000445623 SNAI3Q3KNW1 292 aa11.34□□□□□ -0.59
TIMP1-204ENST00000445623 FDX2Q6P4F2 183 aa11.34□□□□□ -0.59
TIMP1-204ENST00000445623 ZNF773Q6PK81 442 aa11.34□□□□□ -0.59
TIMP1-204ENST00000445623 PRSS45Q7RTY3 260 aa11.34□□□□□ -0.59
TIMP1-204ENST00000445623 MRPL21Q7Z2W9 205 aaKnown RBP11.34□□□□□ -0.59
TIMP1-204ENST00000445623 COMMD2Q86X83 199 aa11.34□□□□□ -0.59
TIMP1-204ENST00000445623 FBXL14Q8N1E6 418 aa11.34□□□□□ -0.59
TIMP1-204ENST00000445623 OR8B12Q8NGG6 310 aa11.34□□□□□ -0.59
TIMP1-204ENST00000445623 SLC25A40Q8TBP6 338 aa11.34□□□□□ -0.59
TIMP1-204ENST00000445623 TMEM171Q8WVE6 324 aa11.34□□□□□ -0.59
TIMP1-204ENST00000445623 GATAD2BQ8WXI9 593 aa11.34□□□□□ -0.59
TIMP1-204ENST00000445623 RORBQ92753 470 aa11.34□□□□□ -0.59
TIMP1-204ENST00000445623 ZNF696Q9H7X3 374 aa11.34□□□□□ -0.59
TIMP1-204ENST00000445623 STARD10Q9Y365 291 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms