RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 DNM1P34Q6PK57 102 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 HDDC2Q7Z4H3 204 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 OR1M1Q8NGA1 313 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 OR10G3Q8NGC4 313 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 RNF133Q8WVZ7 376 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 AQP3Q92482 292 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 AKIRIN1Q9H9L7 192 aaPredicted RBP12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 SCPEP1Q9HB40 452 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 C12orf4Q9NQ89 552 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 IFT46Q9NQC8 304 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 ZNF319Q9P2F9 582 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 RHBDD3Q9Y3P4 386 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 SDK2Q58EX2 2172 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 CPED1A4D0V7 1026 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 TUBAL3A6NHL2 446 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 A6NIZ1 184 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 DISC1C4P0D8 188 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 SULT1C2O00338 296 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 ISG15P05161 165 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 RAP1BP61224 184 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 RAP1AP62834 184 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 C1orf100Q5SVJ3 147 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 CLVS2Q5SYC1 327 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 NAXDQ8IW45 347 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 MARCH1Q8TCQ1 289 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 SHARPINQ9H0F6 387 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 ASH2LQ9UBL3 628 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 C5orf63A6NC05 138 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 ANKUB1A6NFN9 424 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 D6RAR5 112 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 NUDT21O43809 227 aaKnown RBP12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 GDF9O60383 454 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 MPIG6BO95866 241 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 CD74P04233 296 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 FGF2P09038 288 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 UBCP0CG48 685 aaKnown RBP12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 GIMD1P0DJR0 217 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 HSD11B1P28845 292 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 ZNF93P35789 620 aaPredicted RBP12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 CLDN6P56747 220 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 DEFA5Q01523 94 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 LYPD6Q86Y78 171 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 MFSD8Q8NHS3 518 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 ROBO4Q8WZ75 1007 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 TMEM41AQ96HV5 264 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 OR6C1Q96RD1 312 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 RAB33BQ9H082 229 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 FN3KRPQ9HA64 309 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 TAS2R3Q9NYW6 316 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 B3GAT1Q9P2W7 334 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 RAB22AQ9UL26 194 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 C5orf51A6NDU8 294 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 LIPT2A6NK58 231 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 TMEM200CA6NKL6 621 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 SOCS1O15524 211 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 OR2J2O76002 312 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 HPP00738 406 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 IFNA6P05013 189 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 NAGAP17050 411 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 DLSTP36957 453 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 MMP16P51512 607 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 BAMBIQ13145 260 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 PRAMEF20Q5VT98 475 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 C11orf87Q6NUJ2 197 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 JMJD6Q6NYC1 403 aaPredicted RBP12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 TMPPEQ6ZT21 453 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 ANKRD37Q7Z713 158 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 PXT1Q8NFP0 134 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 MAFIPQ8WZ33 124 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 DDIT4LQ96D03 193 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 OR5B2Q96R09 309 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 PPP4R1LQ9P1A2 415 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 CYB5R1Q9UHQ9 305 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 GPN3Q9UHW5 284 aaPredicted RBP12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 RPH3AQ9Y2J0 694 aaPredicted RBP12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 MTCH2Q9Y6C9 303 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 KANTRA0A1W2PQU2 76 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 C9orf170A2RU37 121 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 TTLL8A6PVC2 850 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 GLB1P16278 677 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 OR3A4PP47883 348 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 EMP2P54851 167 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 CLRN1P58418 232 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 SSBP1Q04837 148 aaKnown RBP12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 GLIPR1L1Q6UWM5 242 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 NAA40Q86UY6 237 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 OR5D14Q8NGL3 314 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 MRPS24Q96EL2 167 aaKnown RBP12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 ZC3H10Q96K80 434 aaKnown RBP12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 EDEM2Q9BV94 578 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 CHRNA10Q9GZZ6 450 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 METTL7AQ9H8H3 244 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 FSCN3Q9NQT6 498 aa12.03□□□□□ -0.48
HERPUD1-204ENST00000439977 LOC390937A0A1W2PQ73 354 aa12.02□□□□□ -0.48
HERPUD1-204ENST00000439977 RNF222A6NCQ9 220 aa12.02□□□□□ -0.48
HERPUD1-204ENST00000439977 SSX5O60225 188 aa12.02□□□□□ -0.48
HERPUD1-204ENST00000439977 PLATP00750 562 aa12.02□□□□□ -0.48
HERPUD1-204ENST00000439977 ZBTB25P24278 435 aa12.02□□□□□ -0.48
HERPUD1-204ENST00000439977 CALCRP30988 508 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms