RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 C3orf80F5H4A9 247 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 WDR1O75083 606 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 TSPAN15O95858 294 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 NFYAP23511 347 aaPredicted RBP10.88□□□□□ -0.67
NEK1-201ENST00000439128 LRRC28Q86X40 367 aaPredicted RBP10.88□□□□□ -0.67
NEK1-201ENST00000439128 ZNF683Q8IZ20 524 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 PLPP5Q8NEB5 264 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 COMMD5Q9GZQ3 224 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 ZNF696Q9H7X3 374 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 UNKLQ9H9P5 680 aaKnown RBP10.88□□□□□ -0.67
NEK1-201ENST00000439128 HES4Q9HCC6 221 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 RCE1Q9Y256 329 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 POLR2AP24928 1970 aaKnown RBP10.88□□□□□ -0.67
NEK1-201ENST00000439128 OR2L13Q8N349 312 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 AKR1E2Q96JD6 320 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 SRMP19623 302 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 IL34Q6ZMJ4 242 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 ZNF620Q6ZNG0 422 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 MAVSQ7Z434 540 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 C12orf45Q8N5I9 185 aaPredicted RBP10.87□□□□□ -0.67
NEK1-201ENST00000439128 OR10AD1Q8NGE0 317 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 PLPPR2Q96GM1 343 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 NRTNQ99748 197 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 KIAA1551Q9HCM1 1747 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 ACOT8O14734 319 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 GPR37O15354 613 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 CCL3P10147 92 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 HTD2P86397 168 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 GGTLC2Q14390 218 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 PABPC1L2AQ5JQF8 200 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 IDO2Q6ZQW0 420 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 VN1R4Q7Z5H5 301 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 PELI3Q8N2H9 469 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 NUBPLQ8TB37 319 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 CORO2AQ92828 525 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 TMEM230Q96A57 120 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 CMBLQ96DG6 245 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 WDR54Q9H977 334 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 A4GNTQ9UNA3 340 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 ADAM20O43506 726 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 TFP02787 698 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 CEACAM1P13688 526 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 POLR2IP36954 125 aaKnown RBP10.87□□□□□ -0.67
NEK1-201ENST00000439128 EMX1Q04741 257 aaPredicted RBP10.87□□□□□ -0.67
NEK1-201ENST00000439128 CGB2Q6NT52 195 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 FUNDC1Q8IVP5 155 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 TMEM105Q8N8V8 129 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 BCL2L10Q9HD36 194 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 RNF150Q9ULK6 438 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 DIMT1Q9UNQ2 313 aaKnown RBP10.87□□□□□ -0.67
NEK1-201ENST00000439128 R4GMQ9 66 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 PLXNB2O15031 1838 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 SPRY1O43609 319 aaPredicted RBP10.87□□□□□ -0.67
NEK1-201ENST00000439128 ANGPTL7O43827 346 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 CRYZL1O95825 349 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 PCMT1P22061 227 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 SRPXP78539 464 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 PAQR6Q6TCH4 344 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 SFTPA2Q8IWL1 248 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 ENTHD1Q8IYW4 607 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 SUMF1Q8NBK3 374 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 TPPP3Q9BW30 176 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 ALPLP05186 524 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 CTXN2P0C2S0 81 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 THBS3P49746 956 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 PCK2Q16822 640 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 SLC22A18ASQ8N1D0 253 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 LRRC29Q8WV35 223 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 TTTY12Q9BZ98 90 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 CMC2Q9NRP2 79 aa10.87□□□□□ -0.67
NEK1-201ENST00000439128 NKX2-2O95096 273 aa10.86□□□□□ -0.67
NEK1-201ENST00000439128 WNT1P04628 370 aa10.86□□□□□ -0.67
NEK1-201ENST00000439128 HTR2AP28223 471 aa10.86□□□□□ -0.67
NEK1-201ENST00000439128 UBE2IP63279 158 aaKnown RBP10.86□□□□□ -0.67
NEK1-201ENST00000439128 MESP2Q0VG99 397 aa10.86□□□□□ -0.67
NEK1-201ENST00000439128 OR6S1Q8NH40 331 aa10.86□□□□□ -0.67
NEK1-201ENST00000439128 DVL3Q92997 716 aaPredicted RBP10.86□□□□□ -0.67
NEK1-201ENST00000439128 RBMXL1Q96E39 390 aaKnown RBP10.86□□□□□ -0.67
NEK1-201ENST00000439128 SCNM1Q9BWG6 230 aa10.86□□□□□ -0.67
NEK1-201ENST00000439128 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.86□□□□□ -0.67
NEK1-201ENST00000439128 B9D1Q9UPM9 204 aa10.86□□□□□ -0.67
NEK1-201ENST00000439128 MEX3AA1L020 520 aaKnown RBP10.86□□□□□ -0.67
NEK1-201ENST00000439128 SMAD7O15105 426 aaKnown RBP10.86□□□□□ -0.67
NEK1-201ENST00000439128 TAS2R30P59541 319 aa10.86□□□□□ -0.67
NEK1-201ENST00000439128 SLC25A45Q8N413 288 aa10.86□□□□□ -0.67
NEK1-201ENST00000439128 GPATCH2Q9NW75 528 aa10.86□□□□□ -0.67
NEK1-201ENST00000439128 TTC3P53804 2025 aa10.86□□□□□ -0.67
NEK1-201ENST00000439128 M0QYG6 137 aa10.86□□□□□ -0.67
NEK1-201ENST00000439128 ARPC5O15511 151 aa10.86□□□□□ -0.67
NEK1-201ENST00000439128 CLN5O75503 358 aa10.86□□□□□ -0.67
NEK1-201ENST00000439128 LY86O95711 162 aa10.86□□□□□ -0.67
NEK1-201ENST00000439128 IGFBP1P08833 259 aaPredicted RBP10.86□□□□□ -0.67
NEK1-201ENST00000439128 GIFP27352 417 aa10.86□□□□□ -0.67
NEK1-201ENST00000439128 SSX2Q16385 188 aa10.86□□□□□ -0.67
NEK1-201ENST00000439128 ATP1A1-AS1Q5TC04 95 aa10.86□□□□□ -0.67
NEK1-201ENST00000439128 ZNF774Q6NX45 483 aa10.86□□□□□ -0.67
NEK1-201ENST00000439128 DLEU7Q6UYE1 221 aa10.86□□□□□ -0.67
NEK1-201ENST00000439128 TSNAXQ99598 290 aaKnown RBP10.86□□□□□ -0.67
NEK1-201ENST00000439128 UBQLN2Q9UHD9 624 aa10.86□□□□□ -0.67
NEK1-201ENST00000439128 HBG1P69891 147 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms