RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 STAC2Q6ZMT1 411 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 SSX7Q7RTT5 188 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 MDGA2Q7Z553 956 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 CYB561A3Q8NBI2 242 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 OR13C3Q8NGS6 347 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 GPR119Q8TDV5 335 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 GALNT14Q96FL9 552 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 RNF2Q99496 336 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 NKX3-1Q99801 234 aaPredicted RBP3.39□□□□□ -1.87
SHPRH-205ENST00000433355 PAPOLGQ9BWT3 736 aaKnown RBP3.39□□□□□ -1.87
SHPRH-205ENST00000433355 SIRT7Q9NRC8 400 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 HPGDSO60760 199 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 ZFPL1O95159 310 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 FGF5P12034 268 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 EPHA2P29317 976 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 ACVR1BP36896 505 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 RBP2P50120 134 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 PER3P56645 1201 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 H3F3AP84243 136 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 B3GLCTQ6Y288 498 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 LYG2Q86SG7 212 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 ZNF441Q8N8Z8 693 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 OR2M7Q8NG81 312 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 RRNAD1Q96FB5 475 aaKnown RBP3.39□□□□□ -1.87
SHPRH-205ENST00000433355 C4orf36Q96KX1 117 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 PSMG3Q9BT73 122 aaPredicted RBP3.39□□□□□ -1.87
SHPRH-205ENST00000433355 LRRC61Q9BV99 259 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 C11orf54Q9H0W9 315 aaPredicted RBP3.39□□□□□ -1.87
SHPRH-205ENST00000433355 OR51V1Q9H2C8 321 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 CYP8B1Q9UNU6 501 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 MED13Q9UHV7 2174 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 UNC79Q9P2D8 2635 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 SERPINE2P07093 398 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 OR1E2P47887 323 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 THBS3P49746 956 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 FLI1Q01543 452 aaPredicted RBP3.39□□□□□ -1.87
SHPRH-205ENST00000433355 SMAD1Q15797 465 aaKnown RBP3.39□□□□□ -1.87
SHPRH-205ENST00000433355 PRICKLE4Q2TBC4 344 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 FAM76BQ5HYJ3 339 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 ZNF793Q6ZN11 406 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 TMUB2Q71RG4 321 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 NOXO1Q8NFA2 376 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 DCUN1D4Q92564 292 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 CXorf58Q96LI9 332 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 ANGPTL4Q9BY76 406 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 MAST4O15021 2626 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 IGHV1OR21-1A0A087WYE8 117 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 IQCF5A8MTL0 148 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 HYAL3O43820 417 aaPredicted RBP3.39□□□□□ -1.87
SHPRH-205ENST00000433355 VDAC1P21796 283 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 DLX2Q07687 328 aaPredicted RBP3.39□□□□□ -1.87
SHPRH-205ENST00000433355 SRSF4Q08170 494 aaKnown RBP3.39□□□□□ -1.87
SHPRH-205ENST00000433355 SIGLEC14Q08ET2 396 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 ZNF684Q5T5D7 378 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 LEG1Q6P5S2 330 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 BADQ92934 168 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 CLIP3Q96DZ5 547 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 SULT4A1Q9BR01 284 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 TMED9Q9BVK6 235 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 LDAHQ9H6V9 325 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 PPP1R3EQ9H7J1 279 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 SLC22A13Q9Y226 551 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 IER3IP1Q9Y5U9 82 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 A0A1W2PPV9 198 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 POM121BA6NF01 834 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 DPP4P27487 766 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 CHRDL2Q6WN34 429 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 RD3Q7Z3Z2 195 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 LAX1Q8IWV1 398 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 LINC01555Q8NAE3 123 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 OR14L1PQ8NHC6 308 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 VSTM2AQ8TAG5 236 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 PGAM5Q96HS1 289 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 OCSTAMPQ9BR26 566 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 GGACTQ9BVM4 153 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 EGLN1Q9GZT9 426 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 KCNK12Q9HB15 430 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 TBC1D29Q9UFV1 150 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 MBD1Q9UIS9 605 aaPredicted RBP3.39□□□□□ -1.87
SHPRH-205ENST00000433355 CA14Q9ULX7 337 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 V9GYH0 126 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 TRAV9-1A0A075B6T8 112 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 TRAV17A0A0B4J275 112 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 SOX1O00570 391 aaPredicted RBP3.39□□□□□ -1.87
SHPRH-205ENST00000433355 CBX7O95931 251 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 CH25HO95992 272 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 IFNA2P01563 188 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 CTSDP07339 412 aaPredicted RBP3.39□□□□□ -1.87
SHPRH-205ENST00000433355 UCP3P55916 312 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 POLR2GP62487 172 aaKnown RBP eCLIP3.39□□□□□ -1.87
SHPRH-205ENST00000433355 RPL23AP62750 156 aaKnown RBP3.39□□□□□ -1.87
SHPRH-205ENST00000433355 SERF2P84101 59 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 RBPJQ06330 500 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 RPL18Q07020 188 aaKnown RBP3.39□□□□□ -1.87
SHPRH-205ENST00000433355 CHAF1BQ13112 559 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 DNASE1L3Q13609 305 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 ACKR1Q16570 336 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 MRPL52Q86TS9 123 aaKnown RBP3.39□□□□□ -1.87
SHPRH-205ENST00000433355 OR4K13Q8NH42 304 aa3.39□□□□□ -1.87
SHPRH-205ENST00000433355 AKR7LQ8NHP1 331 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms