RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 NECAB3Q96P71 396 aaPredicted RBP12.32□□□□□ -0.44
HOXC4-202ENST00000430889 SEC22CQ9BRL7 303 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 NAA11Q9BSU3 229 aaPredicted RBP12.32□□□□□ -0.44
HOXC4-202ENST00000430889 SOX7Q9BT81 388 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 DDA1Q9BW61 102 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 ZNF416Q9BWM5 594 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 SRXN1Q9BYN0 137 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 ARRDC1-AS1Q9H2J1 176 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 ING4Q9UNL4 249 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 POLR1DQ9Y2S0 133 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 PYCARD-AS1I3L0S3 204 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 RAB27BO00194 218 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 BPNT1O95861 308 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 ANXA7P20073 488 aaKnown RBP12.32□□□□□ -0.44
HOXC4-202ENST00000430889 CSNK1A1P48729 337 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 GRB2P62993 217 aaKnown RBP12.32□□□□□ -0.44
HOXC4-202ENST00000430889 CSNK2A1P68400 391 aaPredicted RBP12.32□□□□□ -0.44
HOXC4-202ENST00000430889 PMPCAQ10713 525 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 ANGPT1Q15389 498 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 CDCP2Q5VXM1 449 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 OR10K2Q6IF99 312 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 SLC25A25Q6KCM7 469 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 ZNF782Q6ZMW2 699 aaPredicted RBP12.32□□□□□ -0.44
HOXC4-202ENST00000430889 NLRC3Q7RTR2 1065 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 SLC22A24Q8N4F4 322 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 GRPEL2Q8TAA5 225 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 AQP3Q92482 292 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 TAAR9Q96RI9 348 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 PIGQQ9BRB3 760 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 ZNF436Q9C0F3 470 aaPredicted RBP12.32□□□□□ -0.44
HOXC4-202ENST00000430889 PIPOXQ9P0Z9 390 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 SCP2D1Q9UJQ7 156 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 RAB22AQ9UL26 194 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 HSPB11Q9Y547 144 aa12.32□□□□□ -0.44
HOXC4-202ENST00000430889 IGHV3-15A0A0B4J1V0 119 aa12.31□□□□□ -0.44
HOXC4-202ENST00000430889 A0A1W2PNU3 283 aaPredicted RBP12.31□□□□□ -0.44
HOXC4-202ENST00000430889 LNP1A1A4G5 178 aa12.31□□□□□ -0.44
HOXC4-202ENST00000430889 TMEM14DPA8MWL7 114 aa12.31□□□□□ -0.44
HOXC4-202ENST00000430889 SSNA1O43805 119 aa12.31□□□□□ -0.44
HOXC4-202ENST00000430889 CD74P04233 296 aa12.31□□□□□ -0.44
HOXC4-202ENST00000430889 CD3DP04234 171 aa12.31□□□□□ -0.44
HOXC4-202ENST00000430889 MSR1P21757 451 aa12.31□□□□□ -0.44
HOXC4-202ENST00000430889 OTX1P32242 354 aaPredicted RBP12.31□□□□□ -0.44
HOXC4-202ENST00000430889 OTX2P32243 289 aa12.31□□□□□ -0.44
HOXC4-202ENST00000430889 CX3CR1P49238 355 aa12.31□□□□□ -0.44
HOXC4-202ENST00000430889 ACTBP60709 375 aa12.31□□□□□ -0.44
HOXC4-202ENST00000430889 SNRPD2P62316 118 aaKnown RBP12.31□□□□□ -0.44
HOXC4-202ENST00000430889 ACTG1P63261 375 aa12.31□□□□□ -0.44
HOXC4-202ENST00000430889 ZNF260Q3ZCT1 412 aa12.31□□□□□ -0.44
HOXC4-202ENST00000430889 B3GNTL1Q67FW5 361 aaPredicted RBP12.31□□□□□ -0.44
HOXC4-202ENST00000430889 GGNQ86UU5 652 aa12.31□□□□□ -0.44
HOXC4-202ENST00000430889 CDH26Q8IXH8 852 aa12.31□□□□□ -0.44
HOXC4-202ENST00000430889 GABRG1Q8N1C3 465 aa12.31□□□□□ -0.44
HOXC4-202ENST00000430889 PSMF1Q92530 271 aa12.31□□□□□ -0.44
HOXC4-202ENST00000430889 LOXL4Q96JB6 756 aa12.31□□□□□ -0.44
HOXC4-202ENST00000430889 ADGRG7Q96K78 797 aa12.31□□□□□ -0.44
HOXC4-202ENST00000430889 C1orf147Q96MC9 270 aaPredicted RBP12.31□□□□□ -0.44
HOXC4-202ENST00000430889 NUDT16L1Q9BRJ7 211 aaKnown RBP12.31□□□□□ -0.44
HOXC4-202ENST00000430889 SF3B5Q9BWJ5 86 aaKnown RBP12.31□□□□□ -0.44
HOXC4-202ENST00000430889 SLCO5A1Q9H2Y9 848 aa12.31□□□□□ -0.44
HOXC4-202ENST00000430889 NELFAQ9H3P2 528 aa12.31□□□□□ -0.44
HOXC4-202ENST00000430889 TMEM165Q9HC07 324 aa12.31□□□□□ -0.44
HOXC4-202ENST00000430889 MGAT4AQ9UM21 535 aa12.31□□□□□ -0.44
HOXC4-202ENST00000430889 FARSAQ9Y285 508 aaKnown RBP12.31□□□□□ -0.44
HOXC4-202ENST00000430889 SLC5A6Q9Y289 635 aa12.31□□□□□ -0.44
HOXC4-202ENST00000430889 FLVCR1Q9Y5Y0 555 aa12.31□□□□□ -0.44
HOXC4-202ENST00000430889 MUC3AQ02505 3323 aa12.3□□□□□ -0.44
HOXC4-202ENST00000430889 MEIS3P1A6NDR6 274 aa12.3□□□□□ -0.44
HOXC4-202ENST00000430889 C9orf172C9J069 976 aa12.3□□□□□ -0.44
HOXC4-202ENST00000430889 E9PLN8 166 aa12.3□□□□□ -0.44
HOXC4-202ENST00000430889 TERTO14746 1132 aaKnown RBP12.3□□□□□ -0.44
HOXC4-202ENST00000430889 TNFSF11O14788 317 aa12.3□□□□□ -0.44
HOXC4-202ENST00000430889 SMAD9O15198 467 aaKnown RBP12.3□□□□□ -0.44
HOXC4-202ENST00000430889 OR2A4O95047 310 aa12.3□□□□□ -0.44
HOXC4-202ENST00000430889 ITGB2P05107 769 aa12.3□□□□□ -0.44
HOXC4-202ENST00000430889 SERPINA7P05543 415 aa12.3□□□□□ -0.44
HOXC4-202ENST00000430889 ZNF735P0CB33 412 aa12.3□□□□□ -0.44
HOXC4-202ENST00000430889 VSIG8P0DPA2 414 aa12.3□□□□□ -0.44
HOXC4-202ENST00000430889 GTF2F2P13984 249 aa12.3□□□□□ -0.44
HOXC4-202ENST00000430889 CD59P13987 128 aa12.3□□□□□ -0.44
HOXC4-202ENST00000430889 TCN2P20062 427 aa12.3□□□□□ -0.44
HOXC4-202ENST00000430889 RAB3AP20336 220 aa12.3□□□□□ -0.44
HOXC4-202ENST00000430889 PRKXP51817 358 aa12.3□□□□□ -0.44
HOXC4-202ENST00000430889 GALK2Q01415 458 aa12.3□□□□□ -0.44
HOXC4-202ENST00000430889 RSPO1Q2MKA7 263 aaPredicted RBP12.3□□□□□ -0.44
HOXC4-202ENST00000430889 STEAP1BQ6NZ63 245 aa12.3□□□□□ -0.44
HOXC4-202ENST00000430889 RAB11FIP2Q7L804 512 aa12.3□□□□□ -0.44
HOXC4-202ENST00000430889 RNF144BQ7Z419 303 aa12.3□□□□□ -0.44
HOXC4-202ENST00000430889 C20orf196Q8IYI0 205 aa12.3□□□□□ -0.44
HOXC4-202ENST00000430889 FAM109AQ8N4B1 249 aa12.3□□□□□ -0.44
HOXC4-202ENST00000430889 OR5D14Q8NGL3 314 aa12.3□□□□□ -0.44
HOXC4-202ENST00000430889 ZNF431Q8TF32 576 aaPredicted RBP12.3□□□□□ -0.44
HOXC4-202ENST00000430889 INTS12Q96CB8 462 aaKnown RBP12.3□□□□□ -0.44
HOXC4-202ENST00000430889 LIN37Q96GY3 246 aaPredicted RBP12.3□□□□□ -0.44
HOXC4-202ENST00000430889 OR2A7Q96R45 310 aa12.3□□□□□ -0.44
HOXC4-202ENST00000430889 HEXA-AS1Q9H8Q6 139 aa12.3□□□□□ -0.44
HOXC4-202ENST00000430889 GPR84Q9NQS5 396 aa12.3□□□□□ -0.44
HOXC4-202ENST00000430889 ELF5Q9UKW6 265 aaPredicted RBP12.3□□□□□ -0.44
HOXC4-202ENST00000430889 MRPS18CQ9Y3D5 142 aaKnown RBP12.3□□□□□ -0.44
HOXC4-202ENST00000430889 C5orf63A6NC05 138 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms