RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 ANPEPP15144 967 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 TNFRSF1AP19438 455 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 TNFSF4P23510 183 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 OTX1P32242 354 aaPredicted RBP9.85□□□□□ -0.83
HDAC4-202ENST00000430200 CD80P33681 288 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 MDH2P40926 338 aaKnown RBP9.85□□□□□ -0.83
HDAC4-202ENST00000430200 COMPP49747 757 aaPredicted RBP9.85□□□□□ -0.83
HDAC4-202ENST00000430200 UBA52P62987 128 aaKnown RBP9.85□□□□□ -0.83
HDAC4-202ENST00000430200 MS4A2Q01362 244 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 ZNF154Q13106 437 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 CRMP1Q14194 572 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 PGM2L1Q6PCE3 622 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 DNM1P34Q6PK57 102 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 CPLX4Q7Z7G2 160 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 SPICQ8N5J4 248 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 FITM2Q8N6M3 262 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 SIGLECL1Q8N7X8 197 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 ATG16L2Q8NAA4 619 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 SLC37A3Q8NCC5 494 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 ST7LQ8TDW4 575 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 FAM216AQ8WUB2 273 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 PITX2Q99697 317 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 TMEM246Q9BRR3 403 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 CDADC1Q9BWV3 514 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 NSRP1Q9H0G5 558 aaKnown RBP9.85□□□□□ -0.83
HDAC4-202ENST00000430200 PPP1R3EQ9H7J1 279 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 TMEM165Q9HC07 324 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 DDX28Q9NUL7 540 aaKnown RBP9.85□□□□□ -0.83
HDAC4-202ENST00000430200 ARMC1Q9NVT9 282 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 CTSZQ9UBR2 303 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 ARL2BPQ9Y2Y0 163 aa9.85□□□□□ -0.83
HDAC4-202ENST00000430200 C22orf46C9J442 243 aa9.84□□□□□ -0.83
HDAC4-202ENST00000430200 C3orf80F5H4A9 247 aa9.84□□□□□ -0.83
HDAC4-202ENST00000430200 M0R135 149 aa9.84□□□□□ -0.83
HDAC4-202ENST00000430200 FAM20BO75063 409 aa9.84□□□□□ -0.83
HDAC4-202ENST00000430200 GASTP01350 101 aa9.84□□□□□ -0.83
HDAC4-202ENST00000430200 SLC2A1P11166 492 aa9.84□□□□□ -0.83
HDAC4-202ENST00000430200 RPS2P15880 293 aaKnown RBP9.84□□□□□ -0.83
HDAC4-202ENST00000430200 TUBG1P23258 451 aa9.84□□□□□ -0.83
HDAC4-202ENST00000430200 GATA3P23771 443 aa9.84□□□□□ -0.83
HDAC4-202ENST00000430200 ELF3P78545 371 aaPredicted RBP9.84□□□□□ -0.83
HDAC4-202ENST00000430200 ZNF92Q03936 586 aa9.84□□□□□ -0.83
HDAC4-202ENST00000430200 ZNF404Q494X3 552 aa9.84□□□□□ -0.83
HDAC4-202ENST00000430200 GLYATL3Q5SZD4 288 aa9.84□□□□□ -0.83
HDAC4-202ENST00000430200 C12orf54Q6X4T0 127 aa9.84□□□□□ -0.83
HDAC4-202ENST00000430200 KLBQ86Z14 1044 aa9.84□□□□□ -0.83
HDAC4-202ENST00000430200 BPIFB2Q8N4F0 458 aa9.84□□□□□ -0.83
HDAC4-202ENST00000430200 KLHL36Q8N4N3 616 aa9.84□□□□□ -0.83
HDAC4-202ENST00000430200 ZNF511Q8NB15 262 aa9.84□□□□□ -0.83
HDAC4-202ENST00000430200 AQP11Q8NBQ7 271 aa9.84□□□□□ -0.83
HDAC4-202ENST00000430200 NANPQ8TBE9 248 aa9.84□□□□□ -0.83
HDAC4-202ENST00000430200 GNPDA2Q8TDQ7 276 aa9.84□□□□□ -0.83
HDAC4-202ENST00000430200 ZNF799Q96GE5 643 aa9.84□□□□□ -0.83
HDAC4-202ENST00000430200 CLPTM1LQ96KA5 538 aa9.84□□□□□ -0.83
HDAC4-202ENST00000430200 AMELYQ99218 206 aa9.84□□□□□ -0.83
HDAC4-202ENST00000430200 RBM4Q9BWF3 364 aaKnown RBP9.84□□□□□ -0.83
HDAC4-202ENST00000430200 NMNAT2Q9BZQ4 307 aa9.84□□□□□ -0.83
HDAC4-202ENST00000430200 KRCC1Q9NPI7 259 aaPredicted RBP9.84□□□□□ -0.83
HDAC4-202ENST00000430200 TUBG2Q9NRH3 451 aa9.84□□□□□ -0.83
HDAC4-202ENST00000430200 U3KQV3 271 aa9.84□□□□□ -0.83
HDAC4-202ENST00000430200 TRAV40A0A0B4J280 105 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 TNFRSF11BO00300 401 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 ATP8B1O43520 1251 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 HLA-DQA2P01906 255 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 LCATP04180 440 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 T-ENOLP0DO92 83 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 GATA4P43694 442 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 HMGA2P52926 109 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 SMIM11AP58511 58 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 AWAT1Q58HT5 328 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 ARMCX4Q5H9R4 360 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 LINC01590Q5TEZ4 76 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 LCN8Q6JVE9 175 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 ZNF841Q6ZN19 808 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 TMEM179BQ7Z7N9 219 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 WDR86Q86TI4 376 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 FGFRL1Q8N441 504 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 IQCF1Q8N6M8 205 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 PROKR2Q8NFJ6 384 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 OR13G1Q8NGZ3 307 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 MCUR1Q96AQ8 359 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 SLCO4A1Q96BD0 722 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 COG8Q96MW5 612 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 ZNF582Q96NG8 517 aaPredicted RBP9.83□□□□□ -0.84
HDAC4-202ENST00000430200 NIPSNAP1Q9BPW8 284 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 SSBP3Q9BWW4 388 aaPredicted RBP9.83□□□□□ -0.84
HDAC4-202ENST00000430200 SUCNR1Q9BXA5 334 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 MED20Q9H944 212 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 SMURF1Q9HCE7 757 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 UFSP2Q9NUQ7 469 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 TBC1D23Q9NUY8 699 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 IL20Q9NYY1 176 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 ACTR3BQ9P1U1 418 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 LRCH1Q9Y2L9 728 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 AUP1Q9Y679 476 aa9.83□□□□□ -0.84
HDAC4-202ENST00000430200 IGHV2-70DA0A0C4DH43 119 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 A0A1B0GW55 424 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 FAM183AA6NL82 134 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 GMNNO75496 209 aa9.82□□□□□ -0.84
HDAC4-202ENST00000430200 PLATP00750 562 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms