RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 SMG9Q9H0W8 520 aaKnown RBP6.88□□□□□ -1.31
SYNPO2-202ENST00000429713 RNF208Q9H0X6 261 aa6.88□□□□□ -1.31
SYNPO2-202ENST00000429713 OR10A5Q9H207 317 aa6.88□□□□□ -1.31
SYNPO2-202ENST00000429713 RIMS4Q9H426 269 aaPredicted RBP6.88□□□□□ -1.31
SYNPO2-202ENST00000429713 TNFSF18Q9UNG2 199 aa6.88□□□□□ -1.31
SYNPO2-202ENST00000429713 MSX1P28360 303 aa6.88□□□□□ -1.31
SYNPO2-202ENST00000429713 TMEM207Q6UWW9 146 aa6.88□□□□□ -1.31
SYNPO2-202ENST00000429713 OR1S1Q8NH92 325 aa6.88□□□□□ -1.31
SYNPO2-202ENST00000429713 SMPDL3BQ92485 455 aa6.88□□□□□ -1.31
SYNPO2-202ENST00000429713 IGSF21Q96ID5 467 aa6.88□□□□□ -1.31
SYNPO2-202ENST00000429713 ZNF75AQ96N20 296 aa6.88□□□□□ -1.31
SYNPO2-202ENST00000429713 SMIM7Q9BQ49 75 aa6.88□□□□□ -1.31
SYNPO2-202ENST00000429713 P4HTMQ9NXG6 502 aa6.88□□□□□ -1.31
SYNPO2-202ENST00000429713 TBX21Q9UL17 535 aa6.88□□□□□ -1.31
SYNPO2-202ENST00000429713 IGHV2-70P01814 119 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 RPL12P30050 165 aaKnown RBP6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 P2RX1P51575 399 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 C12orf73Q69YU5 71 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 TTC9BQ8N6N2 239 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 WDR89Q96FK6 387 aaPredicted RBP6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 IL19Q9UHD0 177 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 CSAG2Q9Y5P2 127 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 ZNF840PA6NDX5 716 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 SLC31A1O15431 190 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 HOXA6P31267 233 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 CAV3P56539 151 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 TMPRSS9Q7Z410 1059 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 CSNK1A1LQ8N752 337 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 ZNF439Q8NDP4 499 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 OR2T10Q8NGZ9 312 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 DYRK2Q92630 601 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 PCNTO95613 3336 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 A8MVM7 634 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 HEPACAM2A8MVW5 462 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 SLCO2B1O94956 709 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 MMP9P14780 707 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 ISXQ2M1V0 245 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 GFOD2Q3B7J2 385 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 ZNF791Q3KP31 576 aaPredicted RBP6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 C18orf63Q68DL7 685 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 MBOAT2Q6ZWT7 520 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 RNF175Q8N4F7 328 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 RCBTB1Q8NDN9 531 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 OR5A1Q8NGJ0 315 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 OR5D14Q8NGL3 314 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 PARD6GQ9BYG4 376 aaPredicted RBP6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 OR14J1Q9UGF5 321 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 HSPB1P04792 205 aaKnown RBP6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 HLA-DOBP13765 273 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 BRS3P32247 399 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 EIF3IQ13347 325 aaKnown RBP6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 FAM71E1Q6IPT2 247 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 ZNF551Q7Z340 670 aaPredicted RBP6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 LRRC25Q8N386 305 aaPredicted RBP6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 OR13C5Q8NGS8 318 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 FAM213BQ8TBF2 198 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 CA5BP1Q8WTZ4 195 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 PELI2Q9HAT8 420 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 FBXO4Q9UKT5 387 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 B3GALT5Q9Y2C3 310 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 SERPINE3A8MV23 424 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 TARM1B6A8C7 271 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 PLA2G10O15496 165 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 TRHRP34981 398 aaPredicted RBP6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 ZNF79Q15937 498 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 Q6ZVL8 140 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 PTOV1Q86YD1 416 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 OR4D6Q8NGJ1 314 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 FOXJ1Q92949 421 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 CAPNS2Q96L46 248 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 USP36Q9P275 1121 aaKnown RBP6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 TMEM250H0YL14 139 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 ZBTB25P24278 435 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 PDZD11Q5EBL8 140 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 MARCH8Q5T0T0 291 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 DPY19L2P2Q6ZN68 376 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 LSRQ86X29 649 aaPredicted RBP6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 OR1S2Q8NGQ3 325 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 HMGCLL1Q8TB92 370 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 SIGLEC11Q96RL6 698 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 GJD2Q9UKL4 321 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 GLSO94925 669 aaPredicted RBP6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 AMZ1Q400G9 498 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 OR52E2Q8NGJ4 325 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 KLK6Q92876 244 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 UBE2FQ969M7 185 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 DMRT3Q9NQL9 472 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 CNIH4Q9P003 139 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 B4GALT6Q9UBX8 382 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 ZNF106Q9H2Y7 1883 aaKnown RBP6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 TRBV23OR9-2A0A075B6M9 112 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 TRAV39A0A0B4J263 110 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 A0A1B0GV90 55 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 TBX19O60806 448 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 MPGP29372 298 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 Q7L0L9 218 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 CELF5Q8N6W0 485 aaKnown RBP6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 GHSRQ92847 366 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms