RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 FASP25445 335 aa12.6□□□□□ -0.39
RTN4-210ENST00000427710 LIPAP38571 399 aa12.6□□□□□ -0.39
RTN4-210ENST00000427710 CRISP1P54107 249 aa12.6□□□□□ -0.39
RTN4-210ENST00000427710 TPTEP56180 551 aa12.6□□□□□ -0.39
RTN4-210ENST00000427710 TMEM33P57088 247 aa12.6□□□□□ -0.39
RTN4-210ENST00000427710 MRPS11P82912 194 aaKnown RBP12.6□□□□□ -0.39
RTN4-210ENST00000427710 ECH1Q13011 328 aa12.6□□□□□ -0.39
RTN4-210ENST00000427710 TAF13Q15543 124 aa12.6□□□□□ -0.39
RTN4-210ENST00000427710 FBXW12Q6X9E4 464 aa12.6□□□□□ -0.39
RTN4-210ENST00000427710 COLCA1Q6ZS62 124 aa12.6□□□□□ -0.39
RTN4-210ENST00000427710 DPY19L4Q7Z388 723 aa12.6□□□□□ -0.39
RTN4-210ENST00000427710 OR10AD1Q8NGE0 317 aa12.6□□□□□ -0.39
RTN4-210ENST00000427710 OR2AE1Q8NHA4 323 aa12.6□□□□□ -0.39
RTN4-210ENST00000427710 ST7LQ8TDW4 575 aa12.6□□□□□ -0.39
RTN4-210ENST00000427710 PYDC1Q8WXC3 89 aa12.6□□□□□ -0.39
RTN4-210ENST00000427710 INTS14Q96SY0 518 aa12.6□□□□□ -0.39
RTN4-210ENST00000427710 EGLN1Q9GZT9 426 aa12.6□□□□□ -0.39
RTN4-210ENST00000427710 LPAR2Q9HBW0 351 aa12.6□□□□□ -0.39
RTN4-210ENST00000427710 SLC25A19Q9HC21 320 aa12.6□□□□□ -0.39
RTN4-210ENST00000427710 ZDHHC8Q9ULC8 765 aa12.6□□□□□ -0.39
RTN4-210ENST00000427710 WIPI2Q9Y4P8 454 aa12.6□□□□□ -0.39
RTN4-210ENST00000427710 KIAA1324LA8MWY0 1029 aaPredicted RBP12.59□□□□□ -0.39
RTN4-210ENST00000427710 CLDN25C9JDP6 229 aa12.59□□□□□ -0.39
RTN4-210ENST00000427710 G3V2T6 193 aa12.59□□□□□ -0.39
RTN4-210ENST00000427710 HMGN1P05114 100 aa12.59□□□□□ -0.39
RTN4-210ENST00000427710 CD55P08174 381 aa12.59□□□□□ -0.39
RTN4-210ENST00000427710 ADH4P08319 380 aa12.59□□□□□ -0.39
RTN4-210ENST00000427710 PAICSP22234 425 aaKnown RBP12.59□□□□□ -0.39
RTN4-210ENST00000427710 TUBG1P23258 451 aa12.59□□□□□ -0.39
RTN4-210ENST00000427710 EPHA2P29317 976 aa12.59□□□□□ -0.39
RTN4-210ENST00000427710 NAA10P41227 235 aaPredicted RBP12.59□□□□□ -0.39
RTN4-210ENST00000427710 GK2Q14410 553 aaPredicted RBP12.59□□□□□ -0.39
RTN4-210ENST00000427710 SNAPC1Q16533 368 aa12.59□□□□□ -0.39
RTN4-210ENST00000427710 PCK2Q16822 640 aa12.59□□□□□ -0.39
RTN4-210ENST00000427710 HFEQ30201 348 aa12.59□□□□□ -0.39
RTN4-210ENST00000427710 TEX30Q5JUR7 227 aa12.59□□□□□ -0.39
RTN4-210ENST00000427710 FAM166AQ6J272 317 aa12.59□□□□□ -0.39
RTN4-210ENST00000427710 HIPK1Q86Z02 1210 aa12.59□□□□□ -0.39
RTN4-210ENST00000427710 TIGD4Q8IY51 512 aa12.59□□□□□ -0.39
RTN4-210ENST00000427710 SPTSSAQ969W0 71 aa12.59□□□□□ -0.39
RTN4-210ENST00000427710 DUS3LQ96G46 650 aaKnown RBP12.59□□□□□ -0.39
RTN4-210ENST00000427710 PLEKHA8Q96JA3 519 aa12.59□□□□□ -0.39
RTN4-210ENST00000427710 TUBG2Q9NRH3 451 aa12.59□□□□□ -0.39
RTN4-210ENST00000427710 DDX28Q9NUL7 540 aaKnown RBP12.59□□□□□ -0.39
RTN4-210ENST00000427710 CGGBP1Q9UFW8 167 aaPredicted RBP12.59□□□□□ -0.39
RTN4-210ENST00000427710 KCNS2Q9ULS6 477 aa12.59□□□□□ -0.39
RTN4-210ENST00000427710 SAC3D1A6NKF1 404 aa12.58□□□□□ -0.4
RTN4-210ENST00000427710 IQCF6A8MYZ5 107 aa12.58□□□□□ -0.4
RTN4-210ENST00000427710 J3QW42 95 aa12.58□□□□□ -0.4
RTN4-210ENST00000427710 MLNRO43193 412 aa12.58□□□□□ -0.4
RTN4-210ENST00000427710 HLA-DPB1P04440 258 aa12.58□□□□□ -0.4
RTN4-210ENST00000427710 HCCSP53701 268 aa12.58□□□□□ -0.4
RTN4-210ENST00000427710 CDH15P55291 814 aa12.58□□□□□ -0.4
RTN4-210ENST00000427710 LMO4P61968 165 aa12.58□□□□□ -0.4
RTN4-210ENST00000427710 RPS7P62081 194 aaKnown RBP12.58□□□□□ -0.4
RTN4-210ENST00000427710 ZNF92Q03936 586 aa12.58□□□□□ -0.4
RTN4-210ENST00000427710 APOFQ13790 326 aa12.58□□□□□ -0.4
RTN4-210ENST00000427710 KPNB1Q14974 876 aaKnown RBP12.58□□□□□ -0.4
RTN4-210ENST00000427710 ZMAT1Q5H9K5 638 aa12.58□□□□□ -0.4
RTN4-210ENST00000427710 GLYATL3Q5SZD4 288 aa12.58□□□□□ -0.4
RTN4-210ENST00000427710 CXXC5Q7LFL8 322 aaKnown RBP12.58□□□□□ -0.4
RTN4-210ENST00000427710 BCDIN3DQ7Z5W3 292 aaKnown RBP12.58□□□□□ -0.4
RTN4-210ENST00000427710 ZNF283Q8N7M2 679 aa12.58□□□□□ -0.4
RTN4-210ENST00000427710 LINC01356Q8N9X3 169 aa12.58□□□□□ -0.4
RTN4-210ENST00000427710 OR8G5Q8NG78 346 aa12.58□□□□□ -0.4
RTN4-210ENST00000427710 ZNF582Q96NG8 517 aaPredicted RBP12.58□□□□□ -0.4
RTN4-210ENST00000427710 OR2V2Q96R30 315 aa12.58□□□□□ -0.4
RTN4-210ENST00000427710 KCNJ15Q99712 375 aa12.58□□□□□ -0.4
RTN4-210ENST00000427710 ABHD6Q9BV23 337 aa12.58□□□□□ -0.4
RTN4-210ENST00000427710 MARCH7Q9H992 704 aa12.58□□□□□ -0.4
RTN4-210ENST00000427710 KRT84Q9NSB2 600 aa12.58□□□□□ -0.4
RTN4-210ENST00000427710 DNAJC27Q9NZQ0 273 aa12.58□□□□□ -0.4
RTN4-210ENST00000427710 KLHDC2Q9Y2U9 406 aa12.58□□□□□ -0.4
RTN4-210ENST00000427710 ISPDA4D126 451 aa12.57□□□□□ -0.4
RTN4-210ENST00000427710 ZNF878C9JN71 531 aa12.57□□□□□ -0.4
RTN4-210ENST00000427710 F5H5P2 479 aa12.57□□□□□ -0.4
RTN4-210ENST00000427710 PRKYO43930 277 aa12.57□□□□□ -0.4
RTN4-210ENST00000427710 SELEP16581 610 aa12.57□□□□□ -0.4
RTN4-210ENST00000427710 SLC2A5P22732 501 aa12.57□□□□□ -0.4
RTN4-210ENST00000427710 TNFSF4P23510 183 aa12.57□□□□□ -0.4
RTN4-210ENST00000427710 OTX1P32242 354 aaPredicted RBP12.57□□□□□ -0.4
RTN4-210ENST00000427710 BLVRAP53004 296 aa12.57□□□□□ -0.4
RTN4-210ENST00000427710 MALLQ13021 153 aa12.57□□□□□ -0.4
RTN4-210ENST00000427710 PTGES3Q15185 160 aaKnown RBP12.57□□□□□ -0.4
RTN4-210ENST00000427710 CHRFAM7AQ494W8 412 aa12.57□□□□□ -0.4
RTN4-210ENST00000427710 MRPL21Q7Z2W9 205 aaKnown RBP12.57□□□□□ -0.4
RTN4-210ENST00000427710 ZNF420Q8TAQ5 688 aaPredicted RBP12.57□□□□□ -0.4
RTN4-210ENST00000427710 THEM6Q8WUY1 208 aa12.57□□□□□ -0.4
RTN4-210ENST00000427710 HPS1Q92902 700 aa12.57□□□□□ -0.4
RTN4-210ENST00000427710 DVL3Q92997 716 aaPredicted RBP12.57□□□□□ -0.4
RTN4-210ENST00000427710 DIRC2Q96SL1 478 aa12.57□□□□□ -0.4
RTN4-210ENST00000427710 GABARAPL1Q9H0R8 117 aa12.57□□□□□ -0.4
RTN4-210ENST00000427710 BRD7Q9NPI1 651 aa12.57□□□□□ -0.4
RTN4-210ENST00000427710 CCDC182A6NF36 153 aa12.56□□□□□ -0.4
RTN4-210ENST00000427710 TBX1O43435 398 aa12.56□□□□□ -0.4
RTN4-210ENST00000427710 ANXA2P07355 339 aaKnown RBP12.56□□□□□ -0.4
RTN4-210ENST00000427710 MRPL3P09001 348 aaKnown RBP12.56□□□□□ -0.4
RTN4-210ENST00000427710 FCGR1AP12314 374 aa12.56□□□□□ -0.4
RTN4-210ENST00000427710 POLR2IP36954 125 aaKnown RBP12.56□□□□□ -0.4
RTN4-210ENST00000427710 CX3CR1P49238 355 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms