RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 ZNF687Q8N1G0 1237 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 OR13C5Q8NGS8 318 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 C2CD4CQ8TF44 421 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 GPR78Q96P69 363 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 TEAD3Q99594 435 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 IER2Q9BTL4 223 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 SPNS1Q9H2V7 528 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 TRAPPC1Q9Y5R8 145 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 ARID1AO14497 2285 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 IFITM5A6NNB3 132 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 P2RX3P56373 397 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 PDZD11Q5EBL8 140 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 ABHD17CQ6PCB6 329 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 OR4E1P0C645 316 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 MPGP29372 298 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 CD81P60033 236 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 TMEM128Q5BJH2 165 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 ZDHHC23Q8IYP9 409 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 SLC39A11Q8N1S5 342 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 OR52I2Q8NH67 350 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 ADIPOR1Q96A54 375 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 C19orf43Q9BQ61 176 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 P2RY12Q9H244 342 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 GSX1Q9H4S2 264 aaPredicted RBP13.16□□□□□ -0.3
PTPN13-203ENST00000427191 HES4Q9HCC6 221 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 SCAND1P57086 179 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 OCIAD1Q9NX40 245 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 A0A1W2PPQ1 181 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 H0YIG0 161 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 S100A4P26447 101 aaKnown RBP13.16□□□□□ -0.3
PTPN13-203ENST00000427191 TMED6Q8WW62 240 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 TMEM56Q96MV1 263 aa13.16□□□□□ -0.3
PTPN13-203ENST00000427191 SULT1A3P0DMM9 295 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 SULT1A4P0DMN0 295 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 CLN3Q13286 438 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 TMEM81Q6P7N7 255 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 C12orf76Q8N812 135 aaPredicted RBP13.15□□□□□ -0.3
PTPN13-203ENST00000427191 INSM2Q96T92 566 aaPredicted RBP13.15□□□□□ -0.3
PTPN13-203ENST00000427191 SLC23A1Q9UHI7 598 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 M0R135 149 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 MDH2P40926 338 aaKnown RBP13.15□□□□□ -0.3
PTPN13-203ENST00000427191 TMEM268Q5VZI3 342 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 PP6455Q8WZ26 134 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 ATOH1Q92858 354 aaPredicted RBP13.15□□□□□ -0.3
PTPN13-203ENST00000427191 SLAMF6Q96DU3 332 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 ZNF799Q96GE5 643 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 NPAS1Q99742 590 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 A0A1B0GVG6 124 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 CLEC18AA5D8T8 446 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 DEDDO75618 318 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 LIPAP38571 399 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 MEOX1P50221 254 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 C9orf135Q5VTT2 229 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 CPEB2Q7Z5Q1 589 aaKnown RBP13.15□□□□□ -0.3
PTPN13-203ENST00000427191 TMEM130Q8N3G9 435 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 CLEC18CQ8NCF0 446 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 IFI44Q8TCB0 444 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 RASD2Q96D21 266 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 NAA50Q9GZZ1 169 aaKnown RBP13.15□□□□□ -0.3
PTPN13-203ENST00000427191 IL5P05113 134 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 ZNF17P17021 662 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 PIGPP57054 158 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 ZNF680Q8NEM1 530 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 MVB12AQ96EY5 273 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 BET1LQ9NYM9 111 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 SRP9P49458 86 aaKnown RBP13.15□□□□□ -0.3
PTPN13-203ENST00000427191 PAX5Q02548 391 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 RHOUQ7L0Q8 258 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 SLAMF8Q9P0V8 285 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 CTSFQ9UBX1 484 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 ZNF346Q9UL40 294 aaKnown RBP13.15□□□□□ -0.3
PTPN13-203ENST00000427191 FOXJ3Q9UPW0 622 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 ECM29Q5VYK3 1845 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 A0A087WV62 115 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 ACOT8O14734 319 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 PSMB5P28074 263 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 DIO1P49895 249 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 HLXQ14774 488 aaPredicted RBP13.15□□□□□ -0.3
PTPN13-203ENST00000427191 TOMM34Q15785 309 aaPredicted RBP13.15□□□□□ -0.3
PTPN13-203ENST00000427191 FAM71E1Q6IPT2 247 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 CGB2Q6NT52 195 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 AMIGO3Q86WK7 504 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 PELI3Q8N2H9 469 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 RELL2Q8NC24 303 aaPredicted RBP13.15□□□□□ -0.3
PTPN13-203ENST00000427191 MORN4Q8NDC4 146 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 OR4S1Q8NGB4 309 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 ERGIC1Q969X5 290 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 PPP1R3CQ9UQK1 317 aa13.15□□□□□ -0.3
PTPN13-203ENST00000427191 CYBAP13498 195 aa13.15□□□□□ -0.31
PTPN13-203ENST00000427191 PCBP4P57723 403 aaKnown RBP13.15□□□□□ -0.31
PTPN13-203ENST00000427191 CADM3Q8N126 398 aa13.15□□□□□ -0.31
PTPN13-203ENST00000427191 OR10AD1Q8NGE0 317 aa13.15□□□□□ -0.31
PTPN13-203ENST00000427191 FGF13Q92913 245 aa13.15□□□□□ -0.31
PTPN13-203ENST00000427191 PELI1Q96FA3 418 aa13.15□□□□□ -0.31
PTPN13-203ENST00000427191 KLF13Q9Y2Y9 288 aaPredicted RBP13.15□□□□□ -0.31
PTPN13-203ENST00000427191 LRP3O75074 770 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 GLRA1P23415 457 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 CLDN15P56746 228 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 ARIH2OSQ8N7S6 290 aa13.14□□□□□ -0.31
PTPN13-203ENST00000427191 BLNKQ8WV28 456 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms