RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, human

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL12A1-205	ENST00000425443	ATXN7L3	Q14CW9	347 aa	Predicted RBP	11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	ZNF501	Q96CX3	271 aa	Predicted RBP	11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	CMKLR1	Q99788	373 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	TXNIP	Q9H3M7	391 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	OR6C76	A6NM76	312 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	ZNF729	A6NN14	1252 aa	Predicted RBP	11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443		A8MXK9	166 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	DLX5	P56178	289 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	MRPS10	P82664	201 aa	Known RBP	11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	GLO1	Q04760	184 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	CLINT1	Q14677	625 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	OR7A5	Q15622	319 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	LY6G6F	Q5SQ64	297 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	GLYATL3	Q5SZD4	288 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	TMEM88	Q6PEY1	159 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	NUP54	Q7Z3B4	507 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	TGIF2LX	Q8IUE1	241 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	FAM3D	Q96BQ1	224 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	C4orf45	Q96LM5	186 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	WDR13	Q9H1Z4	485 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	TAS2R4	Q9NYW5	299 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	CKLF	Q9UBR5	152 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	SUSD2	Q9UGT4	822 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	FBXO4	Q9UKT5	387 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	SRPK3	Q9UPE1	567 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	EMC9	Q9Y3B6	208 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	NPIPA5	E9PKD4	350 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443		F5H5P2	479 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	LMX1B	O60663	402 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	ALOX12B	O75342	701 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	RP2	O75695	350 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	RAB3D	O95716	219 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	NR0B2	Q15466	257 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	FAM74A1	Q5RGS3	127 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	ZNF679	Q8IYX0	411 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	GALNT16	Q8N428	558 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	SPEM1	Q8N4L4	309 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	WDSUB1	Q8N9V3	476 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	C15orf40	Q8WUR7	153 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	ASB17	Q8WXJ9	295 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	OR8B4	Q96RC9	309 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	OR6C1	Q96RD1	312 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	POFUT1	Q9H488	388 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	KLRF1	Q9NZS2	232 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	NPIPA1	Q9UND3	350 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	DHDH	Q9UQ10	334 aa		11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	COA3	Q9Y2R0	106 aa	Predicted RBP	11.61	□□□□□ -0.55
COL12A1-205	ENST00000425443	CD2	P06729	351 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	SMIM6	P0DI80	62 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	PPP3CB	P16298	524 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	SLC17A1	Q14916	467 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	MOGAT2	Q3SYC2	334 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	LIN54	Q6MZP7	749 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	GSG1L	Q6UXU4	331 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	TIPARP	Q7Z3E1	657 aa	Known RBP	11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	CLEC1A	Q8NC01	280 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	OR6N1	Q8NGY5	312 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	WNT2B	Q93097	391 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	GLRX2	Q9NS18	164 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	MED11	Q9P086	117 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	GHRL	Q9UBU3	117 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443		H3BML4	177 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	DCN	P07585	359 aa	Known RBP	11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	FBP1	P09467	338 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	ACHE	P22303	614 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	CRABP1	P29762	137 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	CXCL12	P48061	93 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	DHPS	P49366	369 aa	Predicted RBP	11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	AKR1C2	P52895	323 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	SNRPE	P62304	92 aa	Known RBP	11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	INSM1	Q01101	510 aa	Predicted RBP	11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	AKR1C1	Q04828	323 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	RAB11B	Q15907	218 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	KMT5C	Q86Y97	462 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	SCARB1	Q8WTV0	552 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	SLC25A28	Q96A46	364 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	CYYR1	Q96J86	154 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	TMEM185B	Q9H7F4	350 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	TUBAL3	A6NHL2	446 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	HMSD	A8MTL9	139 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	PLPP3	O14495	311 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	FADS1	O60427	444 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	FGF2	P09038	288 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	ZNF28	P17035	718 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	PRSS3	P35030	304 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	FAU	P35544	74 aa	Known RBP	11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	SLC26A5	P58743	744 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	EIF2S3L	Q2VIR3	472 aa	Known RBP	11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	BEX5	Q5H9J7	111 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	THEM4	Q5T1C6	240 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	TSSK4	Q6SA08	328 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	CD163	Q86VB7	1156 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	WDFY1	Q8IWB7	410 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	C12orf45	Q8N5I9	185 aa	Predicted RBP	11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	ACBD4	Q8NC06	268 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	SLC25A44	Q96H78	314 aa	Predicted RBP	11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	EMC6	Q9BV81	110 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	APMAP	Q9HDC9	416 aa		11.6	□□□□□ -0.55
COL12A1-205	ENST00000425443	MRPL22	Q9NWU5	206 aa	Known RBP	11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms