RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 KCNJ15Q99712 375 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 OR51E2Q9H255 320 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 PPP1R3EQ9H7J1 279 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 TRIM36Q9NQ86 728 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 G6PC2Q9NQR9 355 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 HECTD1Q9ULT8 2610 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 POLQO75417 2590 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 SMIM30A4D0T7 59 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 IGKV3-15P01624 115 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 APLNRP35414 380 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 RBMXP38159 391 aaKnown RBP11.63□□□□□ -0.55
PRPF39-202ENST00000424478 GDI2P50395 445 aaKnown RBP11.63□□□□□ -0.55
PRPF39-202ENST00000424478 GPR107Q5VW38 600 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 SYS1Q8N2H4 156 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 IL17RDQ8NFM7 739 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 ABHD4Q8TB40 342 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 NEUROG1Q92886 237 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 PBOV1Q9GZY1 135 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 OR52A1Q9UKL2 312 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 CSMD1Q96PZ7 3565 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 ABCA12Q86UK0 2595 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 TUBAL3A6NHL2 446 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 ATP6V1G2-DDX39BF2Z307 99 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 PHYHO14832 338 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 SIAH2O43255 324 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 SULT1C4O75897 302 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 CDK5R1Q15078 307 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 ADAM5Q6NVV9 412 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 ZNF367Q7RTV3 350 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 PHC2Q8IXK0 858 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 FAM71F1Q96KD3 344 aaPredicted RBP11.63□□□□□ -0.55
PRPF39-202ENST00000424478 STARD10Q9Y365 291 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 R4GMQ9 66 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 DPPA5A6NC42 116 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 H3BSA7 217 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 GPRIN2O60269 458 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 TTRP02766 147 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 CBR1P16152 277 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 CD36P16671 472 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 COL8A1P27658 744 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 TGFBR2P37173 567 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 PSMA6P60900 246 aaKnown RBP11.62□□□□□ -0.55
PRPF39-202ENST00000424478 BSPH1Q075Z2 132 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 PRSS45Q7RTY3 260 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 SYT9Q86SS6 491 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 ZNF808Q8N4W9 903 aaPredicted RBP11.62□□□□□ -0.55
PRPF39-202ENST00000424478 PGAM5Q96HS1 289 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 C4orf45Q96LM5 186 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 MNTQ99583 582 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 CRIM1Q9NZV1 1036 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 FBN2P35556 2912 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 ARPC4-TTLL3A0A0A6YYG9 625 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 LOC100506127A0A0U1RQW1 187 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 DPRXA6NFQ7 191 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 PLAUP00749 431 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 TACSTD2P09758 323 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 GADD45AP24522 165 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 RGS6P49758 472 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 HNRNPA0Q13151 305 aaKnown RBP11.62□□□□□ -0.55
PRPF39-202ENST00000424478 ALKBH1Q13686 389 aaKnown RBP11.62□□□□□ -0.55
PRPF39-202ENST00000424478 BLMHQ13867 455 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 SYT6Q5T7P8 510 aaPredicted RBP11.62□□□□□ -0.55
PRPF39-202ENST00000424478 BCL2L15Q5TBC7 163 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 XKRXQ6PP77 449 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 CATSPERDQ86XM0 798 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 ZNF676Q8N7Q3 588 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 BHLHE23Q8NDY6 225 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 SPTSSAQ969W0 71 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 PGLYRP3Q96LB9 341 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 VCX3AQ9NNX9 186 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 PTTG3PQ9NZH4 202 aa11.62□□□□□ -0.55
PRPF39-202ENST00000424478 PTPN13Q12923 2485 aa11.61□□□□□ -0.55
PRPF39-202ENST00000424478 ACOD1A6NK06 481 aa11.61□□□□□ -0.55
PRPF39-202ENST00000424478 ALDH3B2P48448 385 aa11.61□□□□□ -0.55
PRPF39-202ENST00000424478 NR1H2P55055 460 aa11.61□□□□□ -0.55
PRPF39-202ENST00000424478 RNLSQ5VYX0 342 aa11.61□□□□□ -0.55
PRPF39-202ENST00000424478 MTFR2Q6P444 385 aa11.61□□□□□ -0.55
PRPF39-202ENST00000424478 C17orf78Q8N4C9 275 aa11.61□□□□□ -0.55
PRPF39-202ENST00000424478 LYZL4Q96KX0 146 aa11.61□□□□□ -0.55
PRPF39-202ENST00000424478 HS3ST6Q96QI5 342 aa11.61□□□□□ -0.55
PRPF39-202ENST00000424478 CHCHD6Q9BRQ6 235 aa11.61□□□□□ -0.55
PRPF39-202ENST00000424478 PPIL3Q9H2H8 161 aaKnown RBP11.61□□□□□ -0.55
PRPF39-202ENST00000424478 OR4C45A6NMZ5 311 aa11.61□□□□□ -0.55
PRPF39-202ENST00000424478 ABCD4O14678 606 aa11.61□□□□□ -0.55
PRPF39-202ENST00000424478 OTX1P32242 354 aaPredicted RBP11.61□□□□□ -0.55
PRPF39-202ENST00000424478 TPTEP56180 551 aa11.61□□□□□ -0.55
PRPF39-202ENST00000424478 GRB2P62993 217 aaKnown RBP11.61□□□□□ -0.55
PRPF39-202ENST00000424478 GLYATL3Q5SZD4 288 aa11.61□□□□□ -0.55
PRPF39-202ENST00000424478 UFD1Q92890 307 aa11.61□□□□□ -0.55
PRPF39-202ENST00000424478 FUNDC2Q9BWH2 189 aa11.61□□□□□ -0.55
PRPF39-202ENST00000424478 CDH20Q9HBT6 801 aa11.61□□□□□ -0.55
PRPF39-202ENST00000424478 EXOSC4Q9NPD3 245 aaKnown RBP11.61□□□□□ -0.55
PRPF39-202ENST00000424478 GPR84Q9NQS5 396 aa11.61□□□□□ -0.55
PRPF39-202ENST00000424478 AMDHD2Q9Y303 409 aa11.61□□□□□ -0.55
PRPF39-202ENST00000424478 IGHV2OR16-5A0A0B4J2B6 119 aa11.61□□□□□ -0.55
PRPF39-202ENST00000424478 RPL5P46777 297 aaKnown RBP11.61□□□□□ -0.55
PRPF39-202ENST00000424478 ZNF92Q03936 586 aa11.61□□□□□ -0.55
PRPF39-202ENST00000424478 MLLT11Q13015 90 aaPredicted RBP11.61□□□□□ -0.55
PRPF39-202ENST00000424478 MSMPQ1L6U9 139 aa11.61□□□□□ -0.55
PRPF39-202ENST00000424478 TBC1D28Q2M2D7 210 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms