RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 MAGIXQ9H6Y5 334 aa9.27□□□□□ -0.93
SSBP3-206ENST00000420121 DDX28Q9NUL7 540 aaKnown RBP9.27□□□□□ -0.93
SSBP3-206ENST00000420121 IGHV3-64DA0A0J9YX35 117 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 TVP23AA6NH52 213 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 F5H5K5 113 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 SURF4O15260 269 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 FOXH1O75593 365 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 GATA3P23771 443 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 HILS1P60008 231 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 PAX2Q02962 417 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 ECH1Q13011 328 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 MAB21L1Q13394 359 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 TRIM25Q14258 630 aaKnown RBP9.26□□□□□ -0.93
SSBP3-206ENST00000420121 PCK2Q16822 640 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 RPL13AP3Q6NVV1 102 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 PEG10Q86TG7 708 aaKnown RBP9.26□□□□□ -0.93
SSBP3-206ENST00000420121 ARHGAP24Q8N264 748 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 LINC00471Q8N535 108 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 SPICQ8N5J4 248 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 ATG16L2Q8NAA4 619 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 AQP11Q8NBQ7 271 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 BHLHE23Q8NDY6 225 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 OR51L1Q8NGJ5 315 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 OR9Q1Q8NGQ5 310 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 ST7LQ8TDW4 575 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 ZFAND2BQ8WV99 257 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 DACT3Q96B18 629 aaPredicted RBP9.26□□□□□ -0.93
SSBP3-206ENST00000420121 PITX2Q99697 317 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 DGCR6LQ9BY27 220 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 MUC13Q9H3R2 512 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 C7orf69Q9H7B7 122 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 TMEM165Q9HC07 324 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 ESM1Q9NQ30 184 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 KCNG2Q9UJ96 466 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 COMMD3-BMI1R4GMX3 469 aa9.26□□□□□ -0.93
SSBP3-206ENST00000420121 CEACAM18A8MTB9 384 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 M0R135 149 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 ACOT8O14734 319 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 CCNB2O95067 398 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 ZNF205O95201 554 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 SOX14O95416 240 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 FSTL3O95633 263 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 FAM107AO95990 144 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 CYB5R3P00387 301 aaPredicted RBP9.25□□□□□ -0.93
SSBP3-206ENST00000420121 HLA-DQA2P01906 255 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 HLA-DPB1P04440 258 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 WNT2P09544 360 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 CLUP10909 449 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 ZNF12P17014 697 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 MDH2P40926 338 aaKnown RBP9.25□□□□□ -0.93
SSBP3-206ENST00000420121 GATA4P43694 442 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 MNAT1P51948 309 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 RAD23AP54725 363 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 HOXA4Q00056 320 aaPredicted RBP9.25□□□□□ -0.93
SSBP3-206ENST00000420121 CRMP1Q14194 572 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 MICAQ29983 383 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 ZNF181Q2M3W8 571 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 SNAI3Q3KNW1 292 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 KLF17Q5JT82 389 aaPredicted RBP9.25□□□□□ -0.93
SSBP3-206ENST00000420121 FAM201AQ5SY85 155 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 LINC01590Q5TEZ4 76 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 OR2T5Q6IEZ7 315 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 SLC27A4Q6P1M0 643 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 MOGAT3Q86VF5 341 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 DHFR2Q86XF0 187 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 KLHL36Q8N4N3 616 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 PROKR2Q8NFJ6 384 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 OR52L1Q8NGH7 329 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 OR2AJ1Q8NGZ0 328 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 OR2T29Q8NH02 315 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 ZNF799Q96GE5 643 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 CLPTM1LQ96KA5 538 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 ZNF582Q96NG8 517 aaPredicted RBP9.25□□□□□ -0.93
SSBP3-206ENST00000420121 SLC6A7Q99884 636 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 TSSK6Q9BXA6 273 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 HCAR1Q9BXC0 346 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 ARMC1Q9NVT9 282 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 TAS2R1Q9NYW7 299 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 PCDHB10Q9UN67 800 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 INSIG2Q9Y5U4 225 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 U3KQV3 271 aa9.25□□□□□ -0.93
SSBP3-206ENST00000420121 IFNL4K9M1U5 179 aa9.24□□□□□ -0.93
SSBP3-206ENST00000420121 PTBP3O95758 552 aaKnown RBP9.24□□□□□ -0.93
SSBP3-206ENST00000420121 LCATP04180 440 aa9.24□□□□□ -0.93
SSBP3-206ENST00000420121 GYPBP06028 91 aa9.24□□□□□ -0.93
SSBP3-206ENST00000420121 SPI1P17947 270 aa9.24□□□□□ -0.93
SSBP3-206ENST00000420121 CALB2P22676 271 aa9.24□□□□□ -0.93
SSBP3-206ENST00000420121 CD200P41217 278 aa9.24□□□□□ -0.93
SSBP3-206ENST00000420121 SLC25A1P53007 311 aa9.24□□□□□ -0.93
SSBP3-206ENST00000420121 ZNF92Q03936 586 aa9.24□□□□□ -0.93
SSBP3-206ENST00000420121 ZNF154Q13106 437 aa9.24□□□□□ -0.93
SSBP3-206ENST00000420121 CD300LDQ6UXZ3 194 aa9.24□□□□□ -0.93
SSBP3-206ENST00000420121 DCXRQ7Z4W1 244 aa9.24□□□□□ -0.93
SSBP3-206ENST00000420121 TMEM179BQ7Z7N9 219 aa9.24□□□□□ -0.93
SSBP3-206ENST00000420121 ADGRG5Q8IZF4 528 aa9.24□□□□□ -0.93
SSBP3-206ENST00000420121 TEX29Q8N6K0 151 aa9.24□□□□□ -0.93
SSBP3-206ENST00000420121 ZDHHC22Q8N966 263 aa9.24□□□□□ -0.93
SSBP3-206ENST00000420121 ZNF511Q8NB15 262 aa9.24□□□□□ -0.93
SSBP3-206ENST00000420121 OR2T4Q8NH00 348 aa9.24□□□□□ -0.93
SSBP3-206ENST00000420121 NANPQ8TBE9 248 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms