RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 ZNRF4Q8WWF5 429 aa12.96□□□□□ -0.33
NUP50-204ENST00000417702 TMEM158Q8WZ71 300 aa12.96□□□□□ -0.33
NUP50-204ENST00000417702 OTULINQ96BN8 352 aa12.96□□□□□ -0.33
NUP50-204ENST00000417702 ZNF799Q96GE5 643 aa12.96□□□□□ -0.33
NUP50-204ENST00000417702 OR2V2Q96R30 315 aa12.96□□□□□ -0.33
NUP50-204ENST00000417702 COPS4Q9BT78 406 aa12.96□□□□□ -0.33
NUP50-204ENST00000417702 NMNAT2Q9BZQ4 307 aa12.96□□□□□ -0.33
NUP50-204ENST00000417702 WDR76Q9H967 626 aa12.96□□□□□ -0.33
NUP50-204ENST00000417702 PPP1R3CQ9UQK1 317 aa12.96□□□□□ -0.33
NUP50-204ENST00000417702 NPTNQ9Y639 398 aa12.96□□□□□ -0.33
NUP50-204ENST00000417702 IFNL4K9M1U5 179 aa12.95□□□□□ -0.34
NUP50-204ENST00000417702 ZNF593O00488 134 aaPredicted RBP12.95□□□□□ -0.34
NUP50-204ENST00000417702 PHF1O43189 567 aaPredicted RBP12.95□□□□□ -0.34
NUP50-204ENST00000417702 IGHV2-5P01817 119 aa12.95□□□□□ -0.34
NUP50-204ENST00000417702 SBK2P0C263 348 aa12.95□□□□□ -0.34
NUP50-204ENST00000417702 PAICSP22234 425 aaKnown RBP12.95□□□□□ -0.34
NUP50-204ENST00000417702 SRP9P49458 86 aaKnown RBP12.95□□□□□ -0.34
NUP50-204ENST00000417702 LYPD4Q6UWN0 246 aa12.95□□□□□ -0.34
NUP50-204ENST00000417702 PGAP1Q75T13 922 aa12.95□□□□□ -0.34
NUP50-204ENST00000417702 MRPL21Q7Z2W9 205 aaKnown RBP12.95□□□□□ -0.34
NUP50-204ENST00000417702 DCXRQ7Z4W1 244 aa12.95□□□□□ -0.34
NUP50-204ENST00000417702 TMEM179BQ7Z7N9 219 aa12.95□□□□□ -0.34
NUP50-204ENST00000417702 IQCF1Q8N6M8 205 aa12.95□□□□□ -0.34
NUP50-204ENST00000417702 ZNF283Q8N7M2 679 aa12.95□□□□□ -0.34
NUP50-204ENST00000417702 BHLHE23Q8NDY6 225 aa12.95□□□□□ -0.34
NUP50-204ENST00000417702 UTP4Q969X6 686 aaKnown RBP12.95□□□□□ -0.34
NUP50-204ENST00000417702 SLCO4A1Q96BD0 722 aa12.95□□□□□ -0.34
NUP50-204ENST00000417702 CENPMQ9NSP4 180 aa12.95□□□□□ -0.34
NUP50-204ENST00000417702 DDX28Q9NUL7 540 aaKnown RBP12.95□□□□□ -0.34
NUP50-204ENST00000417702 TMEM100Q9NV29 134 aa12.95□□□□□ -0.34
NUP50-204ENST00000417702 UBAP1Q9NZ09 502 aa12.95□□□□□ -0.34
NUP50-204ENST00000417702 DNAJB9Q9UBS3 223 aa12.95□□□□□ -0.34
NUP50-204ENST00000417702 PCDHB10Q9UN67 800 aa12.95□□□□□ -0.34
NUP50-204ENST00000417702 DYSFO75923 2080 aa12.95□□□□□ -0.34
NUP50-204ENST00000417702 PLPP2O43688 288 aa12.94□□□□□ -0.34
NUP50-204ENST00000417702 DEAF1O75398 565 aaPredicted RBP12.94□□□□□ -0.34
NUP50-204ENST00000417702 CLUP10909 449 aa12.94□□□□□ -0.34
NUP50-204ENST00000417702 ANXA8P13928 327 aa12.94□□□□□ -0.34
NUP50-204ENST00000417702 GK2Q14410 553 aaPredicted RBP12.94□□□□□ -0.34
NUP50-204ENST00000417702 PCK2Q16822 640 aa12.94□□□□□ -0.34
NUP50-204ENST00000417702 TEX30Q5JUR7 227 aa12.94□□□□□ -0.34
NUP50-204ENST00000417702 FAHD2BQ6P2I3 314 aaPredicted RBP12.94□□□□□ -0.34
NUP50-204ENST00000417702 SHQ1Q6PI26 577 aaKnown RBP12.94□□□□□ -0.34
NUP50-204ENST00000417702 DRAM2Q6UX65 266 aa12.94□□□□□ -0.34
NUP50-204ENST00000417702 ZNF771Q7L3S4 317 aaPredicted RBP12.94□□□□□ -0.34
NUP50-204ENST00000417702 NAA40Q86UY6 237 aa12.94□□□□□ -0.34
NUP50-204ENST00000417702 SPICQ8N5J4 248 aa12.94□□□□□ -0.34
NUP50-204ENST00000417702 OR10AD1Q8NGE0 317 aa12.94□□□□□ -0.34
NUP50-204ENST00000417702 OR10S1Q8NGN2 331 aa12.94□□□□□ -0.34
NUP50-204ENST00000417702 ST7LQ8TDW4 575 aa12.94□□□□□ -0.34
NUP50-204ENST00000417702 SPRYD4Q8WW59 207 aaPredicted RBP12.94□□□□□ -0.34
NUP50-204ENST00000417702 SLAMF6Q96DU3 332 aa12.94□□□□□ -0.34
NUP50-204ENST00000417702 DUS3LQ96G46 650 aaKnown RBP12.94□□□□□ -0.34
NUP50-204ENST00000417702 FAHD2AQ96GK7 314 aa12.94□□□□□ -0.34
NUP50-204ENST00000417702 RAB3IPQ96QF0 476 aaPredicted RBP12.94□□□□□ -0.34
NUP50-204ENST00000417702 SLC30A2Q9BRI3 323 aa12.94□□□□□ -0.34
NUP50-204ENST00000417702 TEX12Q9BXU0 123 aa12.94□□□□□ -0.34
NUP50-204ENST00000417702 DCAF16Q9NXF7 216 aa12.94□□□□□ -0.34
NUP50-204ENST00000417702 AP4S1Q9Y587 144 aa12.94□□□□□ -0.34
NUP50-204ENST00000417702 FAM183AA6NL82 134 aa12.93□□□□□ -0.34
NUP50-204ENST00000417702 TIPRLO75663 272 aa12.93□□□□□ -0.34
NUP50-204ENST00000417702 IGHV2-70P01814 119 aa12.93□□□□□ -0.34
NUP50-204ENST00000417702 HMGN1P05114 100 aa12.93□□□□□ -0.34
NUP50-204ENST00000417702 OSMP13725 252 aa12.93□□□□□ -0.34
NUP50-204ENST00000417702 SLC15A1P46059 708 aa12.93□□□□□ -0.34
NUP50-204ENST00000417702 GINS1Q14691 196 aa12.93□□□□□ -0.34
NUP50-204ENST00000417702 KLHL36Q8N4N3 616 aa12.93□□□□□ -0.34
NUP50-204ENST00000417702 TEX29Q8N6K0 151 aa12.93□□□□□ -0.34
NUP50-204ENST00000417702 SPATA3Q8NHX4 192 aa12.93□□□□□ -0.34
NUP50-204ENST00000417702 MEGF10Q96KG7 1140 aa12.93□□□□□ -0.34
NUP50-204ENST00000417702 INTS14Q96SY0 518 aa12.93□□□□□ -0.34
NUP50-204ENST00000417702 KCNJ15Q99712 375 aa12.93□□□□□ -0.34
NUP50-204ENST00000417702 MED20Q9H944 212 aa12.93□□□□□ -0.34
NUP50-204ENST00000417702 GCM1Q9NP62 436 aa12.93□□□□□ -0.34
NUP50-204ENST00000417702 A0A0G2JMP0 313 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 A0A0X1KG70 313 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 ZNF878C9JN71 531 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 PRR23D1E9PI22 279 aaPredicted RBP12.92□□□□□ -0.34
NUP50-204ENST00000417702 H0YL77 283 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 GLCEO94923 617 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 PNPP00491 289 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 PRR23D2P0DMB1 279 aaPredicted RBP12.92□□□□□ -0.34
NUP50-204ENST00000417702 FCGR1AP12314 374 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 PRKACGP22612 351 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 FASP25445 335 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 GSTT1P30711 240 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 OTX1P32242 354 aaPredicted RBP12.92□□□□□ -0.34
NUP50-204ENST00000417702 MMP16P51512 607 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 PRKXP51817 358 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 RAD23AP54725 363 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 PRSS12P56730 875 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 ACTR3P61158 418 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 BTG1P62324 171 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 GRB2P62993 217 aaKnown RBP12.92□□□□□ -0.34
NUP50-204ENST00000417702 EIF2B1Q14232 305 aaKnown RBP12.92□□□□□ -0.34
NUP50-204ENST00000417702 TMEM155Q4W5P6 130 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 LINC01590Q5TEZ4 76 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 ERI1Q8IV48 349 aaKnown RBP12.92□□□□□ -0.34
NUP50-204ENST00000417702 C10orf67Q8IYJ2 551 aa12.92□□□□□ -0.34
NUP50-204ENST00000417702 HS3ST5Q8IZT8 346 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms