RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 ELFN2Q5R3F8 820 aa9.37□□□□□ -0.91
SMPD4P1-201ENST00000416717 SFRP5Q5T4F7 317 aa9.37□□□□□ -0.91
SMPD4P1-201ENST00000416717 IGFL2Q6UWQ7 119 aa9.37□□□□□ -0.91
SMPD4P1-201ENST00000416717 CCBE1Q6UXH8 406 aaPredicted RBP9.37□□□□□ -0.91
SMPD4P1-201ENST00000416717 ZNF813Q6ZN06 617 aa9.37□□□□□ -0.91
SMPD4P1-201ENST00000416717 PRSS45Q7RTY3 260 aa9.37□□□□□ -0.91
SMPD4P1-201ENST00000416717 NUFIP2Q7Z417 695 aaKnown RBP9.37□□□□□ -0.91
SMPD4P1-201ENST00000416717 NRARPQ7Z6K4 114 aa9.37□□□□□ -0.91
SMPD4P1-201ENST00000416717 OR51D1Q8NGF3 324 aa9.37□□□□□ -0.91
SMPD4P1-201ENST00000416717 OR1J2Q8NGS2 313 aa9.37□□□□□ -0.91
SMPD4P1-201ENST00000416717 GCDHQ92947 438 aaPredicted RBP9.37□□□□□ -0.91
SMPD4P1-201ENST00000416717 ADAT3Q96EY9 351 aaPredicted RBP9.37□□□□□ -0.91
SMPD4P1-201ENST00000416717 NEDD4LQ96PU5 975 aa9.37□□□□□ -0.91
SMPD4P1-201ENST00000416717 EMC3Q9P0I2 261 aa9.37□□□□□ -0.91
SMPD4P1-201ENST00000416717 MYEF2Q9P2K5 600 aaKnown RBP9.37□□□□□ -0.91
SMPD4P1-201ENST00000416717 PCDHGA9Q9Y5G4 932 aaKnown RBP9.37□□□□□ -0.91
SMPD4P1-201ENST00000416717 ANKRD11Q6UB99 2663 aaPredicted RBP9.37□□□□□ -0.91
SMPD4P1-201ENST00000416717 SPTBN4Q9H254 2564 aa9.37□□□□□ -0.91
SMPD4P1-201ENST00000416717 IGKV3D-15A0A087WSY6 115 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 A0A1B0GTI1 187 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 EEF1E1O43324 174 aaKnown RBP9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 SGCEO43556 437 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 LANCL1O43813 399 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 TMIGD3P0DMS9 266 aaPredicted RBP9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 ABOP16442 354 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 BCL2A1Q16548 175 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 RSPO1Q2MKA7 263 aaPredicted RBP9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 UBE2NLQ5JXB2 153 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 ZNF57Q68EA5 555 aaPredicted RBP9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 SLC16A14Q7RTX9 510 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 SLC22A24Q8N4F4 322 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 JAGN1Q8N5M9 183 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 C19orf18Q8NEA5 215 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 SYNPRQ8TBG9 265 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 SLC25A38Q96DW6 304 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 KCNJ15Q99712 375 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 GAL3ST1Q99999 423 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 NEURL2Q9BR09 285 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 WACQ9BTA9 647 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 NIPAL2Q9H841 368 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 ZNF275Q9NSD4 429 aaPredicted RBP9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 LUZP4Q9P127 313 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 ATMQ13315 3056 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 TPPPO94811 219 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 PTTG1O95997 202 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 PRSS12P56730 875 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 ARF1P84077 181 aaKnown RBP9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 FAPQ12884 760 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 SKA3Q8IX90 412 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 MINDY2Q8NBR6 621 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 OR5M9Q8NGP3 310 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 OR13C9Q8NGT0 318 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 SNIP1Q8TAD8 396 aaKnown RBP9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 THRSPQ92748 146 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 TMEM45BQ96B21 275 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 C11orf54Q9H0W9 315 aaPredicted RBP9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 SP140LQ9H930 580 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 PAQR5Q9NXK6 330 aaPredicted RBP9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 UPB1Q9UBR1 384 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 STEAP1Q9UHE8 339 aa9.36□□□□□ -0.91
SMPD4P1-201ENST00000416717 SLC22A20A6NK97 555 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 K7EM74 188 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 M0R135 149 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 CDK2AP1O14519 115 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 PLA2G10O15496 165 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 YES1P07947 543 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 PTHLHP12272 177 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 ZNF20P17024 532 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 IGFBP3P17936 291 aaPredicted RBP9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 RFX2P48378 723 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 GLYATL3Q5SZD4 288 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 RIPPLY2Q5TAB7 128 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 THOC7Q6I9Y2 204 aaKnown RBP9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 RHOUQ7L0Q8 258 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 GLCCI1Q86VQ1 547 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 ZNF100Q8IYN0 542 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 ZADH2Q8N4Q0 377 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 CELF2-AS1Q8N7Q2 184 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 ZNF799Q96GE5 643 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 SPACA5Q96QH8 159 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 THAP7Q9BT49 309 aaPredicted RBP9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 PARPBPQ9NWS1 579 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 FOXJ3Q9UPW0 622 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 CEACAM4O75871 244 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 PDGFAP04085 211 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 CST2P09228 141 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 CD3GP09693 182 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 HTR5AP47898 357 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 POU3F4P49335 361 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 SRP9P49458 86 aaKnown RBP9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 EFNB2P52799 333 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 HIST1H3AP68431 136 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 DGCR2P98153 550 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 PSG4Q00888 419 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 RAB11BQ15907 218 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 HIST2H3PS2Q5TEC6 136 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 HIST2H3AQ71DI3 136 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 P4HA3Q7Z4N8 544 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 GCNT2Q8N0V5 402 aa9.35□□□□□ -0.91
SMPD4P1-201ENST00000416717 APH1AQ96BI3 265 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms