RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 DVL3Q92997 716 aaPredicted RBP12.67□□□□□ -0.38
UBXN4-203ENST00000416538 CLPTM1LQ96KA5 538 aa12.67□□□□□ -0.38
UBXN4-203ENST00000416538 CCT8L2Q96SF2 557 aa12.67□□□□□ -0.38
UBXN4-203ENST00000416538 RBM4Q9BWF3 364 aaKnown RBP12.67□□□□□ -0.38
UBXN4-203ENST00000416538 TRIM15Q9C019 465 aa12.67□□□□□ -0.38
UBXN4-203ENST00000416538 C7orf69Q9H7B7 122 aa12.67□□□□□ -0.38
UBXN4-203ENST00000416538 DDX28Q9NUL7 540 aaKnown RBP12.67□□□□□ -0.38
UBXN4-203ENST00000416538 ARMC1Q9NVT9 282 aa12.67□□□□□ -0.38
UBXN4-203ENST00000416538 NDE1Q9NXR1 346 aa12.67□□□□□ -0.38
UBXN4-203ENST00000416538 U3KQV3 271 aa12.67□□□□□ -0.38
UBXN4-203ENST00000416538 NBEAL1Q6ZS30 2694 aa12.66□□□□□ -0.38
UBXN4-203ENST00000416538 FOXH1O75593 365 aa12.66□□□□□ -0.38
UBXN4-203ENST00000416538 KRT36O76013 467 aa12.66□□□□□ -0.38
UBXN4-203ENST00000416538 CCNB2O95067 398 aa12.66□□□□□ -0.38
UBXN4-203ENST00000416538 HLA-DQA2P01906 255 aa12.66□□□□□ -0.38
UBXN4-203ENST00000416538 ZNF12P17014 697 aa12.66□□□□□ -0.38
UBXN4-203ENST00000416538 MDH2P40926 338 aaKnown RBP12.66□□□□□ -0.38
UBXN4-203ENST00000416538 SLC6A9P48067 706 aa12.66□□□□□ -0.38
UBXN4-203ENST00000416538 PAX2Q02962 417 aa12.66□□□□□ -0.38
UBXN4-203ENST00000416538 MAB21L1Q13394 359 aa12.66□□□□□ -0.38
UBXN4-203ENST00000416538 MOGAT3Q86VF5 341 aa12.66□□□□□ -0.38
UBXN4-203ENST00000416538 LNX2Q8N448 690 aa12.66□□□□□ -0.38
UBXN4-203ENST00000416538 SPICQ8N5J4 248 aa12.66□□□□□ -0.38
UBXN4-203ENST00000416538 PROKR2Q8NFJ6 384 aa12.66□□□□□ -0.38
UBXN4-203ENST00000416538 OR52L1Q8NGH7 329 aa12.66□□□□□ -0.38
UBXN4-203ENST00000416538 OR5L1Q8NGL2 311 aa12.66□□□□□ -0.38
UBXN4-203ENST00000416538 OR13G1Q8NGZ3 307 aa12.66□□□□□ -0.38
UBXN4-203ENST00000416538 OR2AE1Q8NHA4 323 aa12.66□□□□□ -0.38
UBXN4-203ENST00000416538 ST7LQ8TDW4 575 aa12.66□□□□□ -0.38
UBXN4-203ENST00000416538 DACT3Q96B18 629 aaPredicted RBP12.66□□□□□ -0.38
UBXN4-203ENST00000416538 HCAR1Q9BXC0 346 aa12.66□□□□□ -0.38
UBXN4-203ENST00000416538 NMNAT2Q9BZQ4 307 aa12.66□□□□□ -0.38
UBXN4-203ENST00000416538 MAGIXQ9H6Y5 334 aa12.66□□□□□ -0.38
UBXN4-203ENST00000416538 TBC1D23Q9NUY8 699 aa12.66□□□□□ -0.38
UBXN4-203ENST00000416538 POLR3KQ9Y2Y1 108 aaPredicted RBP12.66□□□□□ -0.38
UBXN4-203ENST00000416538 PPIAL4EA0A075B759 164 aa12.65□□□□□ -0.38
UBXN4-203ENST00000416538 A0A0A6YYJ9 748 aa12.65□□□□□ -0.38
UBXN4-203ENST00000416538 PPIAL4CA0A0B4J2A2 164 aa12.65□□□□□ -0.38
UBXN4-203ENST00000416538 PPIAL4DF5H284 164 aa12.65□□□□□ -0.38
UBXN4-203ENST00000416538 M0R135 149 aa12.65□□□□□ -0.38
UBXN4-203ENST00000416538 LCATP04180 440 aa12.65□□□□□ -0.38
UBXN4-203ENST00000416538 PPIAL4FP0DN26 164 aa12.65□□□□□ -0.38
UBXN4-203ENST00000416538 RAD23AP54725 363 aa12.65□□□□□ -0.38
UBXN4-203ENST00000416538 SLC36A3Q495N2 470 aa12.65□□□□□ -0.38
UBXN4-203ENST00000416538 LINC01590Q5TEZ4 76 aa12.65□□□□□ -0.38
UBXN4-203ENST00000416538 PRAMEF6Q5VXH4 476 aa12.65□□□□□ -0.38
UBXN4-203ENST00000416538 RPL13AP3Q6NVV1 102 aa12.65□□□□□ -0.38
UBXN4-203ENST00000416538 KLHL36Q8N4N3 616 aa12.65□□□□□ -0.38
UBXN4-203ENST00000416538 ZDHHC22Q8N966 263 aa12.65□□□□□ -0.38
UBXN4-203ENST00000416538 ZNF511Q8NB15 262 aa12.65□□□□□ -0.38
UBXN4-203ENST00000416538 C19orf18Q8NEA5 215 aa12.65□□□□□ -0.38
UBXN4-203ENST00000416538 OR2AJ1Q8NGZ0 328 aa12.65□□□□□ -0.38
UBXN4-203ENST00000416538 CCDC124Q96CT7 223 aaKnown RBP12.65□□□□□ -0.38
UBXN4-203ENST00000416538 ZNF799Q96GE5 643 aa12.65□□□□□ -0.38
UBXN4-203ENST00000416538 NSL1Q96IY1 281 aa12.65□□□□□ -0.38
UBXN4-203ENST00000416538 ZNF582Q96NG8 517 aaPredicted RBP12.65□□□□□ -0.38
UBXN4-203ENST00000416538 NIPSNAP1Q9BPW8 284 aa12.65□□□□□ -0.38
UBXN4-203ENST00000416538 TSSK6Q9BXA6 273 aa12.65□□□□□ -0.38
UBXN4-203ENST00000416538 TMEM165Q9HC07 324 aa12.65□□□□□ -0.38
UBXN4-203ENST00000416538 PCDHB10Q9UN67 800 aa12.65□□□□□ -0.38
UBXN4-203ENST00000416538 SAMHD1Q9Y3Z3 626 aaKnown RBP12.65□□□□□ -0.38
UBXN4-203ENST00000416538 C3orf80F5H4A9 247 aa12.64□□□□□ -0.39
UBXN4-203ENST00000416538 SURF4O15260 269 aa12.64□□□□□ -0.39
UBXN4-203ENST00000416538 SLC2A1P11166 492 aa12.64□□□□□ -0.39
UBXN4-203ENST00000416538 SPI1P17947 270 aa12.64□□□□□ -0.39
UBXN4-203ENST00000416538 GATA3P23771 443 aa12.64□□□□□ -0.39
UBXN4-203ENST00000416538 ZNF92Q03936 586 aa12.64□□□□□ -0.39
UBXN4-203ENST00000416538 ZNF154Q13106 437 aa12.64□□□□□ -0.39
UBXN4-203ENST00000416538 TRIM25Q14258 630 aaKnown RBP12.64□□□□□ -0.39
UBXN4-203ENST00000416538 MPPED2Q15777 294 aa12.64□□□□□ -0.39
UBXN4-203ENST00000416538 PCK2Q16822 640 aa12.64□□□□□ -0.39
UBXN4-203ENST00000416538 GLYATL3Q5SZD4 288 aa12.64□□□□□ -0.39
UBXN4-203ENST00000416538 OR2T5Q6IEZ7 315 aa12.64□□□□□ -0.39
UBXN4-203ENST00000416538 USP43Q70EL4 1123 aa12.64□□□□□ -0.39
UBXN4-203ENST00000416538 DCXRQ7Z4W1 244 aa12.64□□□□□ -0.39
UBXN4-203ENST00000416538 DHFR2Q86XF0 187 aa12.64□□□□□ -0.39
UBXN4-203ENST00000416538 IQCF1Q8N6M8 205 aa12.64□□□□□ -0.39
UBXN4-203ENST00000416538 OR2T4Q8NH00 348 aa12.64□□□□□ -0.39
UBXN4-203ENST00000416538 OR2T29Q8NH02 315 aa12.64□□□□□ -0.39
UBXN4-203ENST00000416538 NANPQ8TBE9 248 aa12.64□□□□□ -0.39
UBXN4-203ENST00000416538 ZNF418Q8TF45 676 aaPredicted RBP12.64□□□□□ -0.39
UBXN4-203ENST00000416538 ZFAND2BQ8WV99 257 aa12.64□□□□□ -0.39
UBXN4-203ENST00000416538 SLCO4A1Q96BD0 722 aa12.64□□□□□ -0.39
UBXN4-203ENST00000416538 TMEM246Q9BRR3 403 aa12.64□□□□□ -0.39
UBXN4-203ENST00000416538 DGCR6LQ9BY27 220 aa12.64□□□□□ -0.39
UBXN4-203ENST00000416538 KCNG2Q9UJ96 466 aa12.64□□□□□ -0.39
UBXN4-203ENST00000416538 INSIG2Q9Y5U4 225 aa12.64□□□□□ -0.39
UBXN4-203ENST00000416538 ACOT8O14734 319 aa12.63□□□□□ -0.39
UBXN4-203ENST00000416538 GPR37O15354 613 aa12.63□□□□□ -0.39
UBXN4-203ENST00000416538 FAM20BO75063 409 aa12.63□□□□□ -0.39
UBXN4-203ENST00000416538 FAM107AO95990 144 aa12.63□□□□□ -0.39
UBXN4-203ENST00000416538 SPARCP09486 303 aa12.63□□□□□ -0.39
UBXN4-203ENST00000416538 WNT2P09544 360 aa12.63□□□□□ -0.39
UBXN4-203ENST00000416538 GATA4P43694 442 aa12.63□□□□□ -0.39
UBXN4-203ENST00000416538 SRP9P49458 86 aaKnown RBP12.63□□□□□ -0.39
UBXN4-203ENST00000416538 ECH1Q13011 328 aa12.63□□□□□ -0.39
UBXN4-203ENST00000416538 MICAQ29983 383 aa12.63□□□□□ -0.39
UBXN4-203ENST00000416538 ZNF181Q2M3W8 571 aa12.63□□□□□ -0.39
UBXN4-203ENST00000416538 ZNF404Q494X3 552 aa12.63□□□□□ -0.39
UBXN4-203ENST00000416538 TMEM179BQ7Z7N9 219 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms