RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 LSM2Q9Y333 95 aaKnown RBP17.56■□□□□ 0.4
PTPRU-203ENST00000415600 ANK3Q12955 4377 aaKnown RBP17.56■□□□□ 0.4
PTPRU-203ENST00000415600 AHCYL1O43865 530 aa17.55■□□□□ 0.4
PTPRU-203ENST00000415600 IFNGP01579 166 aa17.55■□□□□ 0.4
PTPRU-203ENST00000415600 CD36P16671 472 aa17.55■□□□□ 0.4
PTPRU-203ENST00000415600 ZNF3P17036 446 aa17.55■□□□□ 0.4
PTPRU-203ENST00000415600 ACHEP22303 614 aa17.55■□□□□ 0.4
PTPRU-203ENST00000415600 LIPAP38571 399 aa17.55■□□□□ 0.4
PTPRU-203ENST00000415600 ALDH3B1P43353 468 aa17.55■□□□□ 0.4
PTPRU-203ENST00000415600 TMED1Q13445 227 aa17.55■□□□□ 0.4
PTPRU-203ENST00000415600 RIN1Q13671 783 aa17.55■□□□□ 0.4
PTPRU-203ENST00000415600 PCGF3Q3KNV8 242 aa17.55■□□□□ 0.4
PTPRU-203ENST00000415600 ARMC4Q5T2S8 1044 aa17.55■□□□□ 0.4
PTPRU-203ENST00000415600 PLBD1Q6P4A8 553 aa17.55■□□□□ 0.4
PTPRU-203ENST00000415600 BBS1Q8NFJ9 593 aa17.55■□□□□ 0.4
PTPRU-203ENST00000415600 ZNF519Q8TB69 540 aa17.55■□□□□ 0.4
PTPRU-203ENST00000415600 SYNPRQ8TBG9 265 aa17.55■□□□□ 0.4
PTPRU-203ENST00000415600 OR5M11Q96RB7 305 aa17.55■□□□□ 0.4
PTPRU-203ENST00000415600 SNX18Q96RF0 628 aa17.55■□□□□ 0.4
PTPRU-203ENST00000415600 ZNF416Q9BWM5 594 aa17.55■□□□□ 0.4
PTPRU-203ENST00000415600 EIF3KQ9UBQ5 218 aaKnown RBP17.55■□□□□ 0.4
PTPRU-203ENST00000415600 KLHL21Q9UJP4 597 aa17.55■□□□□ 0.4
PTPRU-203ENST00000415600 MALRD1Q5VYJ5 2156 aa17.54■□□□□ 0.4
PTPRU-203ENST00000415600 LRP5LA4QPB2 252 aa17.54■□□□□ 0.4
PTPRU-203ENST00000415600 A6NIZ1 184 aa17.54■□□□□ 0.4
PTPRU-203ENST00000415600 FAM183AA6NL82 134 aa17.54■□□□□ 0.4
PTPRU-203ENST00000415600 PRR23D1E9PI22 279 aaPredicted RBP17.54■□□□□ 0.4
PTPRU-203ENST00000415600 PHF1O43189 567 aaPredicted RBP17.54■□□□□ 0.4
PTPRU-203ENST00000415600 FAM157BP0CG42 384 aa17.54■□□□□ 0.4
PTPRU-203ENST00000415600 PRR23D2P0DMB1 279 aaPredicted RBP17.54■□□□□ 0.4
PTPRU-203ENST00000415600 GPR6P46095 362 aaPredicted RBP17.54■□□□□ 0.4
PTPRU-203ENST00000415600 ZNF133P52736 654 aaPredicted RBP17.54■□□□□ 0.4
PTPRU-203ENST00000415600 TMEM33P57088 247 aa17.54■□□□□ 0.4
PTPRU-203ENST00000415600 RAP1BP61224 184 aa17.54■□□□□ 0.4
PTPRU-203ENST00000415600 RAP1AP62834 184 aa17.54■□□□□ 0.4
PTPRU-203ENST00000415600 MED22Q15528 200 aa17.54■□□□□ 0.4
PTPRU-203ENST00000415600 ARMCX4Q5H9R4 360 aa17.54■□□□□ 0.4
PTPRU-203ENST00000415600 THEM4Q5T1C6 240 aa17.54■□□□□ 0.4
PTPRU-203ENST00000415600 C1orf174Q8IYL3 243 aa17.54■□□□□ 0.4
PTPRU-203ENST00000415600 LRRC18Q8N456 261 aa17.54■□□□□ 0.4
PTPRU-203ENST00000415600 ERMAPQ96PL5 475 aaPredicted RBP17.54■□□□□ 0.4
PTPRU-203ENST00000415600 MGLLQ99685 303 aa17.54■□□□□ 0.4
PTPRU-203ENST00000415600 NRIP3Q9NQ35 241 aa17.54■□□□□ 0.4
PTPRU-203ENST00000415600 CLEC2DQ9UHP7 191 aa17.54■□□□□ 0.4
PTPRU-203ENST00000415600 FZR1Q9UM11 496 aa17.54■□□□□ 0.4
PTPRU-203ENST00000415600 EXOSC1Q9Y3B2 195 aaKnown RBP17.54■□□□□ 0.4
PTPRU-203ENST00000415600 MYL12BO14950 172 aa17.53■□□□□ 0.4
PTPRU-203ENST00000415600 ARPC3O15145 178 aa17.53■□□□□ 0.4
PTPRU-203ENST00000415600 IDH3BO43837 385 aa17.53■□□□□ 0.4
PTPRU-203ENST00000415600 LILRA1O75019 489 aa17.53■□□□□ 0.4
PTPRU-203ENST00000415600 TSPAN19P0C672 248 aa17.53■□□□□ 0.4
PTPRU-203ENST00000415600 MYL12AP19105 171 aa17.53■□□□□ 0.4
PTPRU-203ENST00000415600 NOS3P29474 1203 aa17.53■□□□□ 0.4
PTPRU-203ENST00000415600 RPL4P36578 427 aaKnown RBP17.53■□□□□ 0.4
PTPRU-203ENST00000415600 UCP2P55851 309 aa17.53■□□□□ 0.4
PTPRU-203ENST00000415600 PCBD1P61457 104 aa17.53■□□□□ 0.4
PTPRU-203ENST00000415600 RUNX1T1Q06455 604 aa17.53■□□□□ 0.4
PTPRU-203ENST00000415600 AQP6Q13520 282 aa17.53■□□□□ 0.4
PTPRU-203ENST00000415600 MEPCEQ7L2J0 689 aaKnown RBP17.53■□□□□ 0.4
PTPRU-203ENST00000415600 MOSPD2Q8NHP6 518 aa17.53■□□□□ 0.4
PTPRU-203ENST00000415600 FGFBP3Q8TAT2 258 aa17.53■□□□□ 0.4
PTPRU-203ENST00000415600 JAM3Q9BX67 310 aa17.53■□□□□ 0.4
PTPRU-203ENST00000415600 TAAR3PQ9P1P4 343 aa17.53■□□□□ 0.4
PTPRU-203ENST00000415600 SLC22A1O15245 554 aa17.53■□□□□ 0.4
PTPRU-203ENST00000415600 ZNF250P15622 560 aa17.53■□□□□ 0.4
PTPRU-203ENST00000415600 PAICSP22234 425 aaKnown RBP17.53■□□□□ 0.4
PTPRU-203ENST00000415600 RPL27P61353 136 aaKnown RBP17.53■□□□□ 0.4
PTPRU-203ENST00000415600 CRMP1Q14194 572 aa17.53■□□□□ 0.4
PTPRU-203ENST00000415600 SGCAQ16586 387 aa17.53■□□□□ 0.4
PTPRU-203ENST00000415600 LRRC75AQ8NAA5 344 aa17.53■□□□□ 0.4
PTPRU-203ENST00000415600 SLC37A3Q8NCC5 494 aa17.53■□□□□ 0.4
PTPRU-203ENST00000415600 PTP4A1Q93096 173 aa17.53■□□□□ 0.4
PTPRU-203ENST00000415600 DCUN1D5Q9BTE7 237 aa17.53■□□□□ 0.4
PTPRU-203ENST00000415600 REPIN1Q9BWE0 567 aaKnown RBP17.53■□□□□ 0.4
PTPRU-203ENST00000415600 CHCHD3Q9NX63 227 aaKnown RBP17.53■□□□□ 0.4
PTPRU-203ENST00000415600 IER3IP1Q9Y5U9 82 aa17.53■□□□□ 0.4
PTPRU-203ENST00000415600 SLC22A31A6NKX4 558 aa17.52■□□□□ 0.39
PTPRU-203ENST00000415600 B4DSR2 109 aa17.52■□□□□ 0.39
PTPRU-203ENST00000415600 IGHA1P01876 353 aa17.52■□□□□ 0.39
PTPRU-203ENST00000415600 SLC2A5P22732 501 aa17.52■□□□□ 0.39
PTPRU-203ENST00000415600 STOMP27105 288 aa17.52■□□□□ 0.39
PTPRU-203ENST00000415600 RGS6P49758 472 aa17.52■□□□□ 0.39
PTPRU-203ENST00000415600 ETV1P50549 477 aa17.52■□□□□ 0.39
PTPRU-203ENST00000415600 SPHARQ15513 63 aa17.52■□□□□ 0.39
PTPRU-203ENST00000415600 MSMPQ1L6U9 139 aa17.52■□□□□ 0.39
PTPRU-203ENST00000415600 IGFN1Q86VF2 1251 aa17.52■□□□□ 0.39
PTPRU-203ENST00000415600 LRP11Q86VZ4 500 aa17.52■□□□□ 0.39
PTPRU-203ENST00000415600 ARIH2OSQ8N7S6 290 aa17.52■□□□□ 0.39
PTPRU-203ENST00000415600 NSMAFQ92636 917 aa17.52■□□□□ 0.39
PTPRU-203ENST00000415600 OTULINQ96BN8 352 aa17.52■□□□□ 0.39
PTPRU-203ENST00000415600 HCAR1Q9BXC0 346 aa17.52■□□□□ 0.39
PTPRU-203ENST00000415600 MED20Q9H944 212 aa17.52■□□□□ 0.39
PTPRU-203ENST00000415600 FBN1P35555 2871 aaKnown RBP17.51■□□□□ 0.39
PTPRU-203ENST00000415600 CCDC182A6NF36 153 aa17.51■□□□□ 0.39
PTPRU-203ENST00000415600 IGHMP01871 453 aa17.51■□□□□ 0.39
PTPRU-203ENST00000415600 SCG5P05408 212 aa17.51■□□□□ 0.39
PTPRU-203ENST00000415600 NAT2P11245 290 aa17.51■□□□□ 0.39
PTPRU-203ENST00000415600 CCL2P13500 99 aa17.51■□□□□ 0.39
PTPRU-203ENST00000415600 CCNOP22674 350 aa17.51■□□□□ 0.39
PTPRU-203ENST00000415600 GCH1P30793 250 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms