RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 Q6ZR03 302 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 COLCA1Q6ZS62 124 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 PGAP1Q75T13 922 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 MRPL21Q7Z2W9 205 aaKnown RBP9.5□□□□□ -0.89
RFFL-204ENST00000414419 NAA40Q86UY6 237 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 ERI1Q8IV48 349 aaKnown RBP9.5□□□□□ -0.89
RFFL-204ENST00000414419 HS3ST5Q8IZT8 346 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 BHLHE23Q8NDY6 225 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 OR51F2Q8NH61 342 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 DNAJC9Q8WXX5 260 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 SLAMF6Q96DU3 332 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 NRBF2Q96F24 287 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 C1orf159Q96HA4 380 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 OR2V2Q96R30 315 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 INTS14Q96SY0 518 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 GAL3ST1Q99999 423 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 OR51V1Q9H2C8 321 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 ZNF665Q9H7R5 613 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 MED20Q9H944 212 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 LPAR2Q9HBW0 351 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 PNRC2Q9NPJ4 139 aaKnown RBP9.5□□□□□ -0.89
RFFL-204ENST00000414419 TMEM100Q9NV29 134 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 PPP1R3CQ9UQK1 317 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 IQCF6A8MYZ5 107 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 FAM157AC9JC47 383 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 ZNF878C9JN71 531 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 CIB2O75838 187 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 GLCEO94923 617 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 MSMBP08118 114 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 HSD11B1P28845 292 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 GSTT1P30711 240 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 SRP14P37108 136 aaKnown RBP9.49□□□□□ -0.89
RFFL-204ENST00000414419 SRP9P49458 86 aaKnown RBP9.49□□□□□ -0.89
RFFL-204ENST00000414419 PRKXP51817 358 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 RAD23AP54725 363 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 LMO4P61968 165 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 RPS7P62081 194 aaKnown RBP9.49□□□□□ -0.89
RFFL-204ENST00000414419 GRB2P62993 217 aaKnown RBP9.49□□□□□ -0.89
RFFL-204ENST00000414419 EIF2B1Q14232 305 aaKnown RBP9.49□□□□□ -0.89
RFFL-204ENST00000414419 GK2Q14410 553 aaPredicted RBP9.49□□□□□ -0.89
RFFL-204ENST00000414419 KRTAP27-1Q3LI81 207 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 KLHL12Q53G59 568 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 TEX30Q5JUR7 227 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 ACSM5Q6NUN0 579 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 IL17RELQ6ZVW7 336 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 SPATC1Q76KD6 591 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 SHFQ7M4L6 423 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 ZNF283Q8N7M2 679 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 OR6N2Q8NGY6 317 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 SPRYD4Q8WW59 207 aaPredicted RBP9.49□□□□□ -0.89
RFFL-204ENST00000414419 ITLN1Q8WWA0 313 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 TMEM186Q96B77 213 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 SLCO4A1Q96BD0 722 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 KCNJ15Q99712 375 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 PAPOLBQ9NRJ5 636 aaKnown RBP9.49□□□□□ -0.89
RFFL-204ENST00000414419 DDX28Q9NUL7 540 aaKnown RBP9.49□□□□□ -0.89
RFFL-204ENST00000414419 TMEM106BQ9NUM4 274 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 HIF1ANQ9NWT6 349 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 UBAP1Q9NZ09 502 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 PCDHB10Q9UN67 800 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 N6AMT1Q9Y5N5 214 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 NPTNQ9Y639 398 aa9.49□□□□□ -0.89
RFFL-204ENST00000414419 ARHGAP32A7KAX9 2087 aa9.48□□□□□ -0.89
RFFL-204ENST00000414419 TRAV20A0A0B4J274 112 aa9.48□□□□□ -0.89
RFFL-204ENST00000414419 GGT3PA6NGU5 568 aa9.48□□□□□ -0.89
RFFL-204ENST00000414419 IFNL4K9M1U5 179 aa9.48□□□□□ -0.89
RFFL-204ENST00000414419 APOC1P02654 83 aa9.48□□□□□ -0.89
RFFL-204ENST00000414419 SBK2P0C263 348 aa9.48□□□□□ -0.89
RFFL-204ENST00000414419 FASP25445 335 aa9.48□□□□□ -0.89
RFFL-204ENST00000414419 CDK5Q00535 292 aa9.48□□□□□ -0.89
RFFL-204ENST00000414419 PCK2Q16822 640 aa9.48□□□□□ -0.89
RFFL-204ENST00000414419 SPRNQ5BIV9 151 aa9.48□□□□□ -0.89
RFFL-204ENST00000414419 LINC01590Q5TEZ4 76 aa9.48□□□□□ -0.89
RFFL-204ENST00000414419 PLBD1Q6P4A8 553 aa9.48□□□□□ -0.89
RFFL-204ENST00000414419 ZNF771Q7L3S4 317 aaPredicted RBP9.48□□□□□ -0.89
RFFL-204ENST00000414419 DPY19L4Q7Z388 723 aa9.48□□□□□ -0.89
RFFL-204ENST00000414419 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.48□□□□□ -0.89
RFFL-204ENST00000414419 OR10AD1Q8NGE0 317 aa9.48□□□□□ -0.89
RFFL-204ENST00000414419 OR10S1Q8NGN2 331 aa9.48□□□□□ -0.89
RFFL-204ENST00000414419 OR5K1Q8NHB7 308 aa9.48□□□□□ -0.89
RFFL-204ENST00000414419 ST7LQ8TDW4 575 aa9.48□□□□□ -0.89
RFFL-204ENST00000414419 SLC30A2Q9BRI3 323 aa9.48□□□□□ -0.89
RFFL-204ENST00000414419 PRRG3Q9BZD7 231 aa9.48□□□□□ -0.89
RFFL-204ENST00000414419 TOR3AQ9H497 397 aa9.48□□□□□ -0.89
RFFL-204ENST00000414419 SP140LQ9H930 580 aa9.48□□□□□ -0.89
RFFL-204ENST00000414419 NOP16Q9Y3C1 178 aaKnown RBP9.48□□□□□ -0.89
RFFL-204ENST00000414419 AP4S1Q9Y587 144 aa9.48□□□□□ -0.89
RFFL-204ENST00000414419 LRRC30A6NM36 301 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 F5H5P2 479 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 G3V2T6 193 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 PRODHO43272 600 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 TBX1O43435 398 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 XRCC2O43543 280 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 IGHV2-5P01817 119 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 ANXA2P07355 339 aaKnown RBP9.47□□□□□ -0.89
RFFL-204ENST00000414419 FCGR1AP12314 374 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 OTX1P32242 354 aaPredicted RBP9.47□□□□□ -0.89
RFFL-204ENST00000414419 CX3CR1P49238 355 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 CRISP1P54107 249 aa9.47□□□□□ -0.89
RFFL-204ENST00000414419 PRSS12P56730 875 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms