RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 KPTNQ9Y664 436 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 ASXL3Q9C0F0 2248 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 A0A1W2PR48 441 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 FEZF1A0PJY2 475 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 TRABD2BA6NFA1 517 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 USP17L23D6RBM5 183 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 CCSO14618 274 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 RGS11O94810 467 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 IFNA4P05014 189 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 SERPIND1P05546 499 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 GABRA1P14867 456 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 DPP4P27487 766 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 IFNGR2P38484 337 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 CCR6P51684 374 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 CDH11P55287 796 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 ZNF763Q0D2J5 394 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 ZNF155Q12901 538 aaPredicted RBP8.39□□□□□ -1.07
SNHG3-201ENST00000413987 DUSP8Q13202 625 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 NDUFAF6Q330K2 333 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 C5orf47Q569G3 176 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 ZNF385BQ569K4 471 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 LYSMD4Q5XG99 296 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 SFXN4Q6P4A7 337 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 ZNF546Q86UE3 836 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 LHFPL3Q86UP9 236 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 KLBQ86Z14 1044 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 GABRG1Q8N1C3 465 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 FAM98AQ8NCA5 519 aaKnown RBP8.39□□□□□ -1.07
SNHG3-201ENST00000413987 PHOSPHO1Q8TCT1 267 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 DNASE2BQ8WZ79 361 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 MACROD1Q9BQ69 325 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 ATG101Q9BSB4 218 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 ST6GALNAC5Q9BVH7 336 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 NKX6-2Q9C056 277 aaPredicted RBP8.39□□□□□ -1.07
SNHG3-201ENST00000413987 KCNK15Q9H427 330 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 NANSQ9NR45 359 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 NLGN3Q9NZ94 848 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 MRM2Q9UI43 246 aaKnown RBP8.39□□□□□ -1.07
SNHG3-201ENST00000413987 ADAMTS9Q9P2N4 1935 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 IGKV1-8A0A0C4DH67 115 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 PPIAL4DF5H284 164 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 SAP18O00422 153 aaKnown RBP8.38□□□□□ -1.07
SNHG3-201ENST00000413987 HSPA12AO43301 675 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 TIMM8AO60220 97 aaPredicted RBP8.38□□□□□ -1.07
SNHG3-201ENST00000413987 ADAP1O75689 374 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 SC5DO75845 299 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 OR2F2O95006 317 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 OR2A4O95047 310 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 ETHE1O95571 254 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 IGHA1P01876 353 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 HPXP02790 462 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 EDN2P20800 178 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 NPBWR1P48145 328 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 RAB13P51153 203 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 SEC61A1P61619 476 aaKnown RBP8.38□□□□□ -1.07
SNHG3-201ENST00000413987 KLF9Q13886 244 aaPredicted RBP8.38□□□□□ -1.07
SNHG3-201ENST00000413987 ELFN2Q5R3F8 820 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 FAM159AQ6UWV7 190 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 TMUB2Q71RG4 321 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 OR4K1Q8NGD4 311 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 OR5M9Q8NGP3 310 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 OR1S1Q8NH92 325 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 SLC7A13Q8TCU3 470 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 SPRYD4Q8WW59 207 aaPredicted RBP8.38□□□□□ -1.07
SNHG3-201ENST00000413987 PRAP1Q96NZ9 151 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 OR2A7Q96R45 310 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 UBTD1Q9HAC8 227 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 ABRACLQ9P1F3 81 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 COPS7AQ9UBW8 275 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 EPHA6Q9UF33 1036 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 SNRPGP15A8MWD9 76 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 MKRN2OSH3BPM6 223 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 GALR3O60755 368 aaPredicted RBP8.38□□□□□ -1.07
SNHG3-201ENST00000413987 LRP3O75074 770 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 NXPH2O95156 264 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 HPP00738 406 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 HIST1H2ABP04908 130 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 FURINP09958 794 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 OR12D1P0DN82 309 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 SPP1P10451 314 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 SAGP10523 405 aaPredicted RBP8.38□□□□□ -1.07
SNHG3-201ENST00000413987 PSMB1P20618 241 aaKnown RBP8.38□□□□□ -1.07
SNHG3-201ENST00000413987 MMP11P24347 488 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 CDAP32320 146 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 RAB8AP61006 207 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 DEFA5Q01523 94 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 SMCO1Q147U7 214 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 RNPS1Q15287 305 aaKnown RBP8.38□□□□□ -1.07
SNHG3-201ENST00000413987 SMARCD3Q6STE5 483 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 ZNF322Q6U7Q0 402 aaPredicted RBP8.38□□□□□ -1.07
SNHG3-201ENST00000413987 ATRAIDQ6UW56 229 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 ALKAL2Q6UX46 152 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 GSG1LQ6UXU4 331 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 SLCO4C1Q6ZQN7 724 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 HIST3H2AQ7L7L0 130 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 BOD1L2Q8IYS8 172 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 GPR32P1Q8NGA4 272 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 OR4K5Q8NGD3 323 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 OR5M8Q8NGP6 311 aa8.38□□□□□ -1.07
SNHG3-201ENST00000413987 GNPDA2Q8TDQ7 276 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms