RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 LINC00315P59091 139 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 EIF3EP60228 445 aaKnown RBP2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 MAGOHP61326 146 aaKnown RBP2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 DYNLT1P63172 113 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 PAFAH1B3Q15102 231 aaKnown RBP2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 PPP1R7Q15435 360 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 ZSCAN26Q16670 478 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 TMEM183BQ1AE95 376 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 LRRC23Q53EV4 343 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 STEAP4Q687X5 459 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 TWF2Q6IBS0 349 aaKnown RBP2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 DCUN1D2Q6PH85 259 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 ENPP6Q6UWR7 440 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 ZFP2Q6ZN57 461 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 TRMT10CQ7L0Y3 403 aaKnown RBP2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 TMEM183AQ8IXX5 376 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 KIR2DL5AQ8N109 375 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 ZADH2Q8N4Q0 377 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 ACOT4Q8N9L9 421 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 KIR2DL5BQ8NHK3 375 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 RNF139Q8WU17 664 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 DCAKDQ8WVC6 231 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 SMARCD2Q92925 531 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 NTAN1Q96AB6 310 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 LRRC58Q96CX6 371 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 HSFY1Q96LI6 401 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 SERPINB12Q96P63 405 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 XPO6Q96QU8 1125 aaKnown RBP2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 ECSITQ9BQ95 431 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 ULBP1Q9BZM6 244 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 TPK1Q9H3S4 243 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 CLMPQ9H6B4 373 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 UGT1A7Q9HAW7 530 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 UGT1A10Q9HAW8 530 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 UGT1A8Q9HAW9 530 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 SPATA7Q9P0W8 599 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 DEC1Q9P2X7 70 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 KIAA1257Q9ULG3 409 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 SNX10Q9Y5X0 201 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 DOCK8Q8NF50 2099 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 PIKFYVEQ9Y2I7 2098 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 PCM1Q15154 2024 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 ZFC3H1O60293 1989 aaKnown RBP2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 TICRRQ7Z2Z1 1910 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 IGLV11-55A0A075B6I3 123 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 TMEM120BA0PK00 339 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 PCP4L1A6NKN8 68 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 FAM159BA6NKW6 160 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 SMIM23A6NLE4 172 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 SNTNA6NMZ2 147 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 GPR89AB7ZAQ6 455 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 ANKRD65E5RJM6 399 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 GOLGA8MH3BSY2 632 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 SGK1O00141 431 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 ZNF208O43345 1280 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 FCMRO60667 390 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 MTX2O75431 263 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 SUPT3HO75486 399 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 TSPAN12O95859 305 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 FAM107AO95990 144 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 IGLV2-23P01705 113 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 IGLV3-27P01718 113 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 GKN3PP0CG01 181 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 GPR89BP0CG08 455 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 NCK1P16333 377 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 ATF6P18850 670 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 TAC1P20366 129 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 CD1CP29017 333 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 SDC4P31431 198 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 RDXP35241 583 aaKnown RBP2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 CXCL5P42830 114 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 YAP1P46937 504 aaKnown RBP2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 NPBWR2P48146 333 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 SLC11A1P49279 550 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 CEBPDP49716 269 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 HNMTP50135 292 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 GBX2P52951 348 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 FGF8P55075 233 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 MAP3K7CLP57077 242 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 CAV1Q03135 178 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 PPIDQ08752 370 aaKnown RBP2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 SCRN3Q0VDG4 424 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 IL24Q13007 206 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 PDIA2Q13087 525 aaKnown RBP2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 CHIT1Q13231 466 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 FZD2Q14332 565 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 PDK2Q15119 407 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 TMED2Q15363 201 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 RSPO1Q2MKA7 263 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 MFSD14CQ5VZR4 134 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 LYPD2Q6UXB3 125 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 RGS9BPQ6ZS82 235 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 UTS2BQ765I0 119 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 CDKL3Q8IVW4 592 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 LRRC34Q8IZ02 419 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 TMEM86AQ8N2M4 240 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 RIBC1Q8N443 379 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 FBXO36Q8NEA4 188 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 OR52K2Q8NGK3 314 aa2.26□□□□□ -2.05
HMGB1P11-201ENST00000413899 C10orf82Q8WW14 230 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms