RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 TMEM106BQ9NUM4 274 aa8.6□□□□□ -1.03
NCKIPSD-202ENST00000413374 TMEM100Q9NV29 134 aa8.6□□□□□ -1.03
NCKIPSD-202ENST00000413374 CGGBP1Q9UFW8 167 aaPredicted RBP8.6□□□□□ -1.03
NCKIPSD-202ENST00000413374 IL19Q9UHD0 177 aa8.6□□□□□ -1.03
NCKIPSD-202ENST00000413374 ATPIF1Q9UII2 106 aa8.6□□□□□ -1.03
NCKIPSD-202ENST00000413374 BAIAP2Q9UQB8 552 aa8.6□□□□□ -1.03
NCKIPSD-202ENST00000413374 PPP1R3CQ9UQK1 317 aa8.6□□□□□ -1.03
NCKIPSD-202ENST00000413374 NPTNQ9Y639 398 aa8.6□□□□□ -1.03
NCKIPSD-202ENST00000413374 COMMD3-BMI1R4GMX3 469 aa8.6□□□□□ -1.03
NCKIPSD-202ENST00000413374 NSD1Q96L73 2696 aaPredicted RBP8.6□□□□□ -1.03
NCKIPSD-202ENST00000413374 SONP18583 2426 aaKnown RBP8.6□□□□□ -1.03
NCKIPSD-202ENST00000413374 M0R135 149 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 FKBP6O75344 327 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 DEAF1O75398 565 aaPredicted RBP8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 TIPRLO75663 272 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 RGS9O75916 674 aaPredicted RBP8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 CYB5R3P00387 301 aaPredicted RBP8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 IGHV2-5P01817 119 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 ANPEPP15144 967 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 TNFRSF1AP19438 455 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 ENTPD1P49961 510 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 SLC25A1P53007 311 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 BNIP1Q12981 228 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 ECH1Q13011 328 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 EIF2B1Q14232 305 aaKnown RBP8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 KLHL12Q53G59 568 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 PLBD1Q6P4A8 553 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 CD300LDQ6UXZ3 194 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 COLCA1Q6ZS62 124 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 PGAP1Q75T13 922 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 ERI1Q8IV48 349 aaKnown RBP8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 OR13G1Q8NGZ3 307 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 OR2AE1Q8NHA4 323 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 SPRYD4Q8WW59 207 aaPredicted RBP8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 POP5Q969H6 163 aaKnown RBP8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 SPTSSAQ969W0 71 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 RAB39BQ96DA2 213 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 ZNF799Q96GE5 643 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 MEGF10Q96KG7 1140 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 OCEL1Q9H607 264 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 METTL17Q9H7H0 456 aaPredicted RBP8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 ZNF556Q9HAH1 456 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 CMC2Q9NRP2 79 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 KCNG2Q9UJ96 466 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 PCDHB10Q9UN67 800 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 JMJD1CQ15652 2540 aa8.59□□□□□ -1.03
NCKIPSD-202ENST00000413374 LOC105371242A0A075B767 164 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 TCRBV3S1A0A5B6 114 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 GGT3PA6NGU5 568 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 IQCF6A8MYZ5 107 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 SURF4O15260 269 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 MLNRO43193 412 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 TBX1O43435 398 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 AVPP01185 164 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 OSMP13725 252 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 ZNF3P17036 446 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 CA6P23280 308 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 ZFP36P26651 326 aaKnown RBP8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 GSTT1P30711 240 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 GRK5P34947 590 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 PMELP40967 661 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 HOXA4Q00056 320 aaPredicted RBP8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 ZNF92Q03936 586 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 FAM201AQ5SY85 155 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 GLYATL3Q5SZD4 288 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 LINC01590Q5TEZ4 76 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 SLC27A4Q6P1M0 643 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 MRPL21Q7Z2W9 205 aaKnown RBP8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 DPY19L4Q7Z388 723 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 MOGAT3Q86VF5 341 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 PHC2Q8IXK0 858 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 C19orf18Q8NEA5 215 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 OR6N2Q8NGY6 317 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 ST7LQ8TDW4 575 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 TMEM158Q8WZ71 300 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 DVL3Q92997 716 aaPredicted RBP8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 ZMYND19Q96E35 227 aaPredicted RBP8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 SLC30A2Q9BRI3 323 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 YY1AP1Q9H869 796 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 GCM1Q9NP62 436 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 BRD7Q9NPI1 651 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 DNAJC27Q9NZQ0 273 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 DNAJB9Q9UBS3 223 aa8.58□□□□□ -1.04
NCKIPSD-202ENST00000413374 TRAV20A0A0B4J274 112 aa8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 PRR23D1E9PI22 279 aaPredicted RBP8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 TMEM178BH3BS89 294 aa8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 J3QW42 95 aa8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 IGHV2-70P01814 119 aa8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 ANXA2P07355 339 aaKnown RBP8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 PRR23D2P0DMB1 279 aaPredicted RBP8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 ADRA2CP18825 462 aa8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 PCMT1P22061 227 aa8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 SRP9P49458 86 aaKnown RBP8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 MMP16P51512 607 aa8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 HCCSP53701 268 aa8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 SEC61A1P61619 476 aaKnown RBP8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 BTG1P62324 171 aa8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 ZMYND11Q15326 602 aa8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 OR8G1Q15617 311 aa8.57□□□□□ -1.04
NCKIPSD-202ENST00000413374 KRTAP24-1Q3LI83 254 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms