RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 DOCK8Q8NF50 2099 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 OR2T1O43869 369 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 GMFGO60234 142 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 TSPAN2O60636 221 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 CHRM2P08172 466 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 NPBWR1P48145 328 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 SGCAQ16586 387 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 VAX1Q5SQQ9 334 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 ARRDC1Q8N5I2 433 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 METTL27Q8N6F8 245 aaPredicted RBP15.72■□□□□ 0.11
SDCBP-202ENST00000413219 OR6S1Q8NH40 331 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 OR4K15Q8NH41 348 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 AQP10Q96PS8 301 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 TBL1XR1Q9BZK7 514 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 TMEM14DPA8MWL7 114 aa15.71■□□□□ 0.11
SDCBP-202ENST00000413219 TMEM150CB9EJG8 249 aa15.71■□□□□ 0.11
SDCBP-202ENST00000413219 H0YIZ8 118 aa15.71■□□□□ 0.11
SDCBP-202ENST00000413219 TO15178 435 aa15.71■□□□□ 0.11
SDCBP-202ENST00000413219 H2BFMP0C1H6 154 aa15.71■□□□□ 0.11
SDCBP-202ENST00000413219 GNB3P16520 340 aa15.71■□□□□ 0.11
SDCBP-202ENST00000413219 MEOX2P50222 304 aa15.71■□□□□ 0.11
SDCBP-202ENST00000413219 EIF5AP63241 154 aaKnown RBP15.71■□□□□ 0.11
SDCBP-202ENST00000413219 TDGQ13569 410 aa15.71■□□□□ 0.11
SDCBP-202ENST00000413219 GRINAQ7Z429 371 aa15.71■□□□□ 0.11
SDCBP-202ENST00000413219 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.71■□□□□ 0.11
SDCBP-202ENST00000413219 ZNF248Q8NDW4 579 aa15.71■□□□□ 0.11
SDCBP-202ENST00000413219 OR52N4Q8NGI2 321 aa15.71■□□□□ 0.11
SDCBP-202ENST00000413219 ZNF721Q8TF20 911 aa15.71■□□□□ 0.11
SDCBP-202ENST00000413219 RNF133Q8WVZ7 376 aa15.71■□□□□ 0.11
SDCBP-202ENST00000413219 GAS2L1Q99501 681 aaPredicted RBP15.71■□□□□ 0.11
SDCBP-202ENST00000413219 MAP3K3Q99759 626 aa15.71■□□□□ 0.11
SDCBP-202ENST00000413219 NRIP2Q9BQI9 281 aa15.71■□□□□ 0.11
SDCBP-202ENST00000413219 ACKR4Q9NPB9 350 aa15.71■□□□□ 0.11
SDCBP-202ENST00000413219 DNAJB11Q9UBS4 358 aa15.71■□□□□ 0.11
SDCBP-202ENST00000413219 GPR132Q9UNW8 380 aa15.71■□□□□ 0.11
SDCBP-202ENST00000413219 PRAMEF26H0Y7S4 382 aa15.71■□□□□ 0.1
SDCBP-202ENST00000413219 KCNAB3O43448 404 aa15.71■□□□□ 0.1
SDCBP-202ENST00000413219 SFT2D2O95562 160 aa15.71■□□□□ 0.1
SDCBP-202ENST00000413219 DDAH2O95865 285 aa15.71■□□□□ 0.1
SDCBP-202ENST00000413219 GSTP1P09211 210 aaKnown RBP15.71■□□□□ 0.1
SDCBP-202ENST00000413219 CTSEP14091 401 aa15.71■□□□□ 0.1
SDCBP-202ENST00000413219 CAV2P51636 162 aa15.71■□□□□ 0.1
SDCBP-202ENST00000413219 ZP4Q12836 540 aa15.71■□□□□ 0.1
SDCBP-202ENST00000413219 SQSTM1Q13501 440 aa15.71■□□□□ 0.1
SDCBP-202ENST00000413219 ZNF529Q6P280 563 aa15.71■□□□□ 0.1
SDCBP-202ENST00000413219 ADAMTS17Q8TE56 1095 aa15.71■□□□□ 0.1
SDCBP-202ENST00000413219 SMIM8Q96KF7 97 aa15.71■□□□□ 0.1
SDCBP-202ENST00000413219 SCGB3A2Q96PL1 93 aa15.71■□□□□ 0.1
SDCBP-202ENST00000413219 GAL3ST4Q96RP7 486 aa15.71■□□□□ 0.1
SDCBP-202ENST00000413219 RCC2Q9P258 522 aaKnown RBP15.71■□□□□ 0.1
SDCBP-202ENST00000413219 KIF26BQ2KJY2 2108 aa15.7■□□□□ 0.1
SDCBP-202ENST00000413219 CHD7Q9P2D1 2997 aa15.7■□□□□ 0.1
SDCBP-202ENST00000413219 ZNF705EA8MWA4 302 aaPredicted RBP15.7■□□□□ 0.1
SDCBP-202ENST00000413219 C10orf142B7Z368 130 aa15.7■□□□□ 0.1
SDCBP-202ENST00000413219 PMP2P02689 132 aa15.7■□□□□ 0.1
SDCBP-202ENST00000413219 TFF2Q03403 129 aa15.7■□□□□ 0.1
SDCBP-202ENST00000413219 ZNF542PQ5EBM4 170 aa15.7■□□□□ 0.1
SDCBP-202ENST00000413219 ZNF585AQ6P3V2 769 aa15.7■□□□□ 0.1
SDCBP-202ENST00000413219 ASB10Q8WXI3 467 aa15.7■□□□□ 0.1
SDCBP-202ENST00000413219 C8orf33Q9H7E9 229 aaPredicted RBP15.7■□□□□ 0.1
SDCBP-202ENST00000413219 FAM206AQ9NX38 181 aa15.7■□□□□ 0.1
SDCBP-202ENST00000413219 WIF1Q9Y5W5 379 aa15.7■□□□□ 0.1
SDCBP-202ENST00000413219 CACNA1CQ13936 2221 aa15.7■□□□□ 0.1
SDCBP-202ENST00000413219 TMEM131Q92545 1883 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 IGKV3D-11A0A0A0MRZ8 115 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 SPTY2D1-AS1A0A0U1RR47 76 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 NPIPB13A6NJU9 1138 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 NPIPB4C9JG80 1138 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 FTCDNL1E5RQL4 147 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 WISP1O95388 367 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 CRYBA1P05813 215 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 FOLR2P14207 255 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 ABCD3P28288 659 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 GNALP38405 381 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 DAP3P51398 398 aaKnown RBP15.69■□□□□ 0.1
SDCBP-202ENST00000413219 PDZK1IP1Q13113 114 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 EBPQ15125 230 aaKnown RBP15.69■□□□□ 0.1
SDCBP-202ENST00000413219 TMEM31Q5JXX7 168 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 EIF5AL1Q6IS14 154 aaKnown RBP15.69■□□□□ 0.1
SDCBP-202ENST00000413219 OR5D14Q8NGL3 314 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 GPR119Q8TDV5 335 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 WNT2BQ93097 391 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 RHOFQ9HBH0 211 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 PDE7BQ9NP56 450 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 FLVCR1Q9Y5Y0 555 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 LOC101059948A0A1B0GTJ6 334 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 MEX3AA1L020 520 aaKnown RBP15.69■□□□□ 0.1
SDCBP-202ENST00000413219 PRSS44E7EML9 344 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 SOX1O00570 391 aaPredicted RBP15.69■□□□□ 0.1
SDCBP-202ENST00000413219 TTRP02766 147 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 SPP1P10451 314 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 PAX6P26367 422 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 CAPZBP47756 277 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 GPR85P60893 370 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 PLCXD2Q0VAA5 305 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 GFOD2Q3B7J2 385 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 HLA-DQA1Q5Y7H0 255 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 LINC00346Q8IVM7 164 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 RXFP4Q8TDU9 374 aa15.69■□□□□ 0.1
SDCBP-202ENST00000413219 TMEM230Q96A57 120 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms