RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 DRAM2Q6UX65 266 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 DCXRQ7Z4W1 244 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 GVQW1Q8N7I0 195 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 OTOSQ8NHW6 89 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 CMBLQ96DG6 245 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 OR10A2Q9H208 303 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 PARP11Q9NR21 331 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 VSIG4Q9Y279 399 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 RPS2P15880 293 aaKnown RBP12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 GGTLC2Q14390 218 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 PRR22Q8IZ63 422 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 FAM160A2Q8N612 972 aaPredicted RBP12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 OR9A4Q8NGU2 314 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 WDR92Q96MX6 357 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 CCNL2Q96S94 520 aaPredicted RBP12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 PRRX2Q99811 253 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 FBXL17Q9UF56 701 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 GAB2Q9UQC2 676 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 AMDHD2Q9Y303 409 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 THSD7AQ9UPZ6 1657 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 RNGTTO60942 597 aaKnown RBP12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 QDPRP09417 244 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 RAB38P57729 211 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 ECH1Q13011 328 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 TAAR8Q969N4 342 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 AK3Q9UIJ7 227 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 SLC7A11Q9UPY5 501 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 DIRAS3O95661 229 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 BPNT1O95861 308 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 PKIAP61925 76 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 H3F3AP84243 136 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 MOGAT2Q3SYC2 334 aa12.54□□□□□ -0.4
CLTCL1-201ENST00000412649 TRAV36DV7A0A075B6V5 113 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 TRAV14DV4A0A0A6YYC5 116 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 CPED1A4D0V7 1026 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 ARGFXA6NJG6 315 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 ST8SIA3O43173 380 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 KLF4O43474 513 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 CST5P28325 142 aaPredicted RBP12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 RUNX2Q13950 521 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 ZNF705AQ6ZN79 300 aaPredicted RBP12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 TSACCQ96A04 125 aaPredicted RBP12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 SLC25A28Q96A46 364 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 UTP23Q9BRU9 249 aaKnown RBP12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 BCO1Q9HAY6 547 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 TREM2Q9NZC2 230 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 CENPVL1A0A0U1RR11 272 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 SPTBP11277 2137 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 FOLR1P15328 257 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 DHPSP49366 369 aaPredicted RBP12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 TLE3Q04726 772 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 EEF1A1P5Q5VTE0 462 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 OR5T1Q8NG75 326 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 APOOQ9BUR5 198 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 LRIT1Q9P2V4 623 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 SUSD2Q9UGT4 822 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 ZNF729A6NN14 1252 aaPredicted RBP12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 RPL27P61353 136 aaKnown RBP12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 RAB11AP62491 216 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 TAF9Q16594 264 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 C2orf27AQ580R0 203 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 ACER2Q5QJU3 275 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 OR51A4Q8NGJ6 313 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 ADAMTS18Q8TE60 1221 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 TVP23CQ96ET8 276 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 GGACTQ9BVM4 153 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 FLRT3Q9NZU0 649 aa12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 GDF2Q9UK05 429 aaPredicted RBP12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 COA3Q9Y2R0 106 aaPredicted RBP12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 NOSIPQ9Y314 301 aaKnown RBP12.53□□□□□ -0.4
CLTCL1-201ENST00000412649 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.52□□□□□ -0.4
CLTCL1-201ENST00000412649 TNFSF12O43508 249 aa12.52□□□□□ -0.4
CLTCL1-201ENST00000412649 HEXBP07686 556 aa12.52□□□□□ -0.4
CLTCL1-201ENST00000412649 NR2C1P13056 603 aa12.52□□□□□ -0.4
CLTCL1-201ENST00000412649 PPICP45877 212 aa12.52□□□□□ -0.4
CLTCL1-201ENST00000412649 CSNK1EP49674 416 aaKnown RBP12.52□□□□□ -0.4
CLTCL1-201ENST00000412649 CARD17Q5XLA6 110 aa12.52□□□□□ -0.4
CLTCL1-201ENST00000412649 OR5D18Q8NGL1 313 aa12.52□□□□□ -0.4
CLTCL1-201ENST00000412649 HPSE2Q8WWQ2 592 aa12.52□□□□□ -0.4
CLTCL1-201ENST00000412649 FRZBQ92765 325 aa12.52□□□□□ -0.4
CLTCL1-201ENST00000412649 ELOA3CA0A087WX78 387 aaPredicted RBP12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 C17orf105B2RV13 164 aa12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 CLN5O75503 358 aa12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 GPANK1O95872 356 aa12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 GSTP1P09211 210 aaKnown RBP12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 FPR2P25090 351 aa12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 COL13A1Q5TAT6 717 aaPredicted RBP12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 GGNBP1Q5YKI7 109 aa12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 BMFQ96LC9 184 aa12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 SARGQ9BW04 601 aa12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 DNAJB12Q9NXW2 375 aaKnown RBP12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 R4GMQ9 66 aa12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 TSC2P49815 1807 aa12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 ZNF728P0DKX0 622 aa12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 VIPR2P41587 438 aa12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 RPS15P62841 145 aaKnown RBP12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 ZNF528Q3MIS6 628 aa12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 MED25Q71SY5 747 aa12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 RHOVQ96L33 236 aa12.52□□□□□ -0.41
CLTCL1-201ENST00000412649 LAT2Q9GZY6 243 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms