RNA–Protein interactions for RNA: ENST00000409809.5

COL6A3-206, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-206ENST00000409809 HTR6P50406 440 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 GSG1Q2KHT4 349 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 DRAM2Q6UX65 266 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 PRICKLE2Q7Z3G6 844 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 OLIG1Q8TAK6 271 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 DTD2Q96FN9 168 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 PDCD1LG2Q9BQ51 273 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 CLEC2DQ9UHP7 191 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 CDC42EP3Q9UKI2 254 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 PRAMEF4O60810 478 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 OR3A1P47881 315 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 ZNF573Q86YE8 665 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 TAAR6Q96RI8 345 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 IL17CQ9P0M4 197 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 HEATR5AQ86XA9 2040 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 KIR2DS5A0A0G2JLQ3 304 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 A0A0G2JNG1 304 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 KIR2DS3K7RE56 304 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 CRISP2P16562 243 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 PLP1P60201 277 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 HLA-DRB3P79483 266 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 GPM6BQ13491 265 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 KIR2DS5Q14953 304 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 SLC45A2Q9UMX9 530 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 GABRQQ9UN88 632 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 SNED1Q8TER0 1413 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 RGPD2P0DJD1 1756 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 RBFOX3A6NFN3 312 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 ADM5C9JUS6 153 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 NDUFS8O00217 210 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 ZNF888P0CJ79 500 aaPredicted RBP11.78□□□□□ -0.52
COL6A3-206ENST00000409809 BMI1P35226 326 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 ERHP84090 104 aaKnown RBP11.78□□□□□ -0.52
COL6A3-206ENST00000409809 PHLDA2Q53GA4 152 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 MAVSQ7Z434 540 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 PMCHL2Q9BQD1 86 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 TMEM231Q9H6L2 316 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 PLCH1Q4KWH8 1693 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 OR7A5Q15622 319 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 GPR137Q96N19 417 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 FKRPQ9H9S5 495 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 C1orf105O95561 183 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 ACAA1P09110 424 aaPredicted RBP11.78□□□□□ -0.52
COL6A3-206ENST00000409809 TCN2P20062 427 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 LIMK1P53667 647 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 CYB5D2Q8WUJ1 264 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 TXNDC17Q9BRA2 123 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 C17orf105B2RV13 164 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 TIMP2P16035 220 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 BRS3P32247 399 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 CLDN12P56749 244 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 IL10RAQ13651 578 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 GDF7Q7Z4P5 450 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 CAMKMTQ7Z624 323 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 ANGPTL5Q86XS5 388 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 CRHP06850 196 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 GPNMBQ14956 572 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 OR52L2PQ8NGH6 319 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 OR5M9Q8NGP3 310 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 RTP3Q9BQQ7 232 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 SLC17A9Q9BYT1 436 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 OR7C2O60412 319 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 DEFA4P12838 97 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 ZNF17P17021 662 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 RAB38P57729 211 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 SLC16A13Q7RTY0 426 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 ZNF383Q8NA42 475 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 TOE1Q96GM8 510 aaKnown RBP11.78□□□□□ -0.52
COL6A3-206ENST00000409809 PARP11Q9NR21 331 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 INSL5Q9Y5Q6 135 aa11.78□□□□□ -0.52
COL6A3-206ENST00000409809 NAAAQ02083 359 aa11.77□□□□□ -0.52
COL6A3-206ENST00000409809 EVX2Q03828 476 aa11.77□□□□□ -0.52
COL6A3-206ENST00000409809 REC114Q7Z4M0 266 aa11.77□□□□□ -0.52
COL6A3-206ENST00000409809 RNF2Q99496 336 aa11.77□□□□□ -0.52
COL6A3-206ENST00000409809 AMBRA1Q9C0C7 1298 aa11.77□□□□□ -0.52
COL6A3-206ENST00000409809 METTL1Q9UBP6 276 aaKnown RBP11.77□□□□□ -0.52
COL6A3-206ENST00000409809 ZNF732B4DXR9 585 aa11.77□□□□□ -0.52
COL6A3-206ENST00000409809 ISLRO14498 428 aa11.77□□□□□ -0.52
COL6A3-206ENST00000409809 GSTZ1O43708 216 aaPredicted RBP11.77□□□□□ -0.52
COL6A3-206ENST00000409809 IGFBP1P08833 259 aaPredicted RBP11.77□□□□□ -0.52
COL6A3-206ENST00000409809 TSEN54Q7Z6J9 526 aaKnown RBP11.77□□□□□ -0.52
COL6A3-206ENST00000409809 WDTC1Q8N5D0 677 aa11.77□□□□□ -0.52
COL6A3-206ENST00000409809 OR5K2Q8NHB8 316 aa11.77□□□□□ -0.52
COL6A3-206ENST00000409809 OR1A1Q9P1Q5 309 aa11.77□□□□□ -0.52
COL6A3-206ENST00000409809 PIGLQ9Y2B2 252 aa11.77□□□□□ -0.52
COL6A3-206ENST00000409809 KDM4EB2RXH2 506 aaPredicted RBP11.77□□□□□ -0.53
COL6A3-206ENST00000409809 DEGS1O15121 323 aa11.77□□□□□ -0.53
COL6A3-206ENST00000409809 VAMP5O95183 116 aa11.77□□□□□ -0.53
COL6A3-206ENST00000409809 MDH2P40926 338 aaKnown RBP11.77□□□□□ -0.53
COL6A3-206ENST00000409809 HYAL2Q12891 473 aa11.77□□□□□ -0.53
COL6A3-206ENST00000409809 AWAT1Q58HT5 328 aa11.77□□□□□ -0.53
COL6A3-206ENST00000409809 FAM109BQ6ICB4 259 aaPredicted RBP11.77□□□□□ -0.53
COL6A3-206ENST00000409809 BCL2L2Q92843 193 aaPredicted RBP11.77□□□□□ -0.53
COL6A3-206ENST00000409809 NECTIN4Q96NY8 510 aa11.77□□□□□ -0.53
COL6A3-206ENST00000409809 PRRX2Q99811 253 aa11.77□□□□□ -0.53
COL6A3-206ENST00000409809 LRRC3CA6NJW4 275 aa11.77□□□□□ -0.53
COL6A3-206ENST00000409809 F7P08709 466 aaPredicted RBP11.77□□□□□ -0.53
COL6A3-206ENST00000409809 INHBBP09529 407 aa11.77□□□□□ -0.53
COL6A3-206ENST00000409809 PAX5Q02548 391 aa11.77□□□□□ -0.53
COL6A3-206ENST00000409809 ZNF765Q7L2R6 523 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms