RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 SPINK14Q6IE38 97 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 OR10K2Q6IF99 312 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 JMJD6Q6NYC1 403 aaPredicted RBP17.74■□□□□ 0.43
USP39-204ENST00000409766 ABHD12BQ7Z5M8 362 aaPredicted RBP17.74■□□□□ 0.43
USP39-204ENST00000409766 FGD2Q7Z6J4 655 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 GJC3Q8NFK1 279 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 GPX8Q8TED1 209 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 MS4A3Q96HJ5 214 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 ADGRG7Q96K78 797 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 SFXN2Q96NB2 322 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 FAM210AQ96ND0 272 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 UQCC2Q9BRT2 126 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 SOX7Q9BT81 388 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 RBM24Q9BX46 236 aaKnown RBP17.74■□□□□ 0.43
USP39-204ENST00000409766 METTL17Q9H7H0 456 aaPredicted RBP17.74■□□□□ 0.43
USP39-204ENST00000409766 BEX1Q9HBH7 125 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 NOX3Q9HBY0 568 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 ZFP64Q9NPA5 681 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 GPR84Q9NQS5 396 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 EMC3Q9P0I2 261 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 ITGB1BP2Q9UKP3 347 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 A0A0A6YYH2 397 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 A6NJ64 397 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 GALR2O43603 387 aaPredicted RBP17.74■□□□□ 0.43
USP39-204ENST00000409766 PRAF2O60831 178 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 TRAPPC6AO75865 159 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 RAB3AP20336 220 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 RAB6AP20340 208 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 CD96P40200 585 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 HIST1H3AP68431 136 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 GALK2Q01415 458 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 BCL2A1Q16548 175 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 HIST2H3PS2Q5TEC6 136 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 HIST2H3AQ71DI3 136 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 SLC22A24Q8N4F4 322 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 ZNF283Q8N7M2 679 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 OR13C9Q8NGT0 318 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 TMEM246Q9BRR3 403 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 UTP23Q9BRU9 249 aaKnown RBP17.74■□□□□ 0.43
USP39-204ENST00000409766 ULBP2Q9BZM5 246 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 TMEM9BQ9NQ34 198 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 MYEF2Q9P2K5 600 aaKnown RBP17.74■□□□□ 0.43
USP39-204ENST00000409766 FLVCR1Q9Y5Y0 555 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 NDUFB6O95139 128 aa17.73■□□□□ 0.43
USP39-204ENST00000409766 TGM6O95932 706 aa17.73■□□□□ 0.43
USP39-204ENST00000409766 HPXP02790 462 aa17.73■□□□□ 0.43
USP39-204ENST00000409766 CXCL3P19876 107 aa17.73■□□□□ 0.43
USP39-204ENST00000409766 FAUP35544 74 aaKnown RBP17.73■□□□□ 0.43
USP39-204ENST00000409766 SSBP1Q04837 148 aaKnown RBP17.73■□□□□ 0.43
USP39-204ENST00000409766 Q5BKY6 102 aa17.73■□□□□ 0.43
USP39-204ENST00000409766 FAM57BQ71RH2 274 aa17.73■□□□□ 0.43
USP39-204ENST00000409766 ZNF627Q7L945 461 aa17.73■□□□□ 0.43
USP39-204ENST00000409766 OR4C16Q8NGL9 310 aa17.73■□□□□ 0.43
USP39-204ENST00000409766 ZFAND1Q8TCF1 268 aa17.73■□□□□ 0.43
USP39-204ENST00000409766 ADAMTS17Q8TE56 1095 aa17.73■□□□□ 0.43
USP39-204ENST00000409766 ZNF716A6NP11 495 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 SULT1C2O00338 296 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 ARPC1BO15143 372 aaKnown RBP17.72■□□□□ 0.43
USP39-204ENST00000409766 ICMTO60725 284 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 NEURL1O76050 574 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 SULT1A3P0DMM9 295 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 SULT1A4P0DMN0 295 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 ABOP16442 354 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 ZNF20P17024 532 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 GDF1P27539 372 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 NTF4P34130 210 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 STARP49675 285 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 CLDN15P56746 228 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 COMMD2Q86X83 199 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 PIAS4Q8N2W9 510 aaPredicted RBP17.72■□□□□ 0.43
USP39-204ENST00000409766 LRRC18Q8N456 261 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 ZNF775Q96BV0 537 aaPredicted RBP17.72■□□□□ 0.43
USP39-204ENST00000409766 SEH1LQ96EE3 360 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 ZNF837Q96EG3 531 aaPredicted RBP17.72■□□□□ 0.43
USP39-204ENST00000409766 GAL3ST1Q99999 423 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 SLC5A6Q9Y289 635 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 PCDHGA1Q9Y5H4 931 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 A0A1B0GUH1 482 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 MEIS3P1A6NDR6 274 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 E9PLN8 166 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 FABP7O15540 132 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 CXCL13O43927 109 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 GFRA1P56159 465 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 QRFPP83859 136 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 MOGAT2Q3SYC2 334 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 HES3Q5TGS1 186 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 SLC25A25Q6KCM7 469 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 PAQR4Q8N4S7 273 aaPredicted RBP17.72■□□□□ 0.43
USP39-204ENST00000409766 ASCC1Q8N9N2 400 aaKnown RBP17.72■□□□□ 0.43
USP39-204ENST00000409766 CLEC1AQ8NC01 280 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 OR10D3Q8NH80 312 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 OR2V1Q8NHB1 315 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 RAB22AQ9UL26 194 aa17.72■□□□□ 0.43
USP39-204ENST00000409766 ERCC1P07992 297 aaPredicted RBP17.71■□□□□ 0.43
USP39-204ENST00000409766 GSTT2P0CG29 244 aa17.71■□□□□ 0.43
USP39-204ENST00000409766 ZNF84P51523 738 aa17.71■□□□□ 0.43
USP39-204ENST00000409766 MECP2P51608 486 aaKnown RBP17.71■□□□□ 0.43
USP39-204ENST00000409766 MRPS34P82930 218 aaKnown RBP17.71■□□□□ 0.43
USP39-204ENST00000409766 PMPCAQ10713 525 aa17.71■□□□□ 0.43
USP39-204ENST00000409766 RSPO1Q2MKA7 263 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms