RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 TPTEP56180 551 aa12.17□□□□□ -0.46
CHRNA1-204ENST00000409323 ECH1Q13011 328 aa12.17□□□□□ -0.46
CHRNA1-204ENST00000409323 FOXB2Q5VYV0 432 aa12.17□□□□□ -0.46
CHRNA1-204ENST00000409323 OR1J2Q8NGS2 313 aa12.17□□□□□ -0.46
CHRNA1-204ENST00000409323 RORBQ92753 470 aa12.17□□□□□ -0.46
CHRNA1-204ENST00000409323 RNF166Q96A37 237 aaPredicted RBP12.17□□□□□ -0.46
CHRNA1-204ENST00000409323 SPOCK3Q9BQ16 436 aa12.17□□□□□ -0.46
CHRNA1-204ENST00000409323 JAM3Q9BX67 310 aa12.17□□□□□ -0.46
CHRNA1-204ENST00000409323 INPP5EQ9NRR6 644 aa12.17□□□□□ -0.46
CHRNA1-204ENST00000409323 PTTG3PQ9NZH4 202 aa12.17□□□□□ -0.46
CHRNA1-204ENST00000409323 STARD10Q9Y365 291 aa12.17□□□□□ -0.46
CHRNA1-204ENST00000409323 PLCE1Q9P212 2302 aa12.16□□□□□ -0.46
CHRNA1-204ENST00000409323 LOC110117498-PIK3R3F6TDL0 507 aa12.16□□□□□ -0.46
CHRNA1-204ENST00000409323 SRSF10O75494 262 aaKnown RBP12.16□□□□□ -0.46
CHRNA1-204ENST00000409323 PCMT1P22061 227 aa12.16□□□□□ -0.46
CHRNA1-204ENST00000409323 PEX19P40855 299 aa12.16□□□□□ -0.46
CHRNA1-204ENST00000409323 NANOS3P60323 173 aaKnown RBP12.16□□□□□ -0.46
CHRNA1-204ENST00000409323 PSMA6P60900 246 aaKnown RBP12.16□□□□□ -0.46
CHRNA1-204ENST00000409323 ACTA2P62736 377 aa12.16□□□□□ -0.46
CHRNA1-204ENST00000409323 ACTG2P63267 376 aa12.16□□□□□ -0.46
CHRNA1-204ENST00000409323 IRF3Q14653 427 aa12.16□□□□□ -0.46
CHRNA1-204ENST00000409323 HLXQ14774 488 aaPredicted RBP12.16□□□□□ -0.46
CHRNA1-204ENST00000409323 MED22Q15528 200 aa12.16□□□□□ -0.46
CHRNA1-204ENST00000409323 MSMPQ1L6U9 139 aa12.16□□□□□ -0.46
CHRNA1-204ENST00000409323 ZNF787Q6DD87 383 aa12.16□□□□□ -0.46
CHRNA1-204ENST00000409323 PRSS48Q7RTY5 328 aa12.16□□□□□ -0.46
CHRNA1-204ENST00000409323 NANOGP1Q8N7R0 232 aa12.16□□□□□ -0.46
CHRNA1-204ENST00000409323 OR1J1Q8NGS3 322 aa12.16□□□□□ -0.46
CHRNA1-204ENST00000409323 SOX7Q9BT81 388 aa12.16□□□□□ -0.46
CHRNA1-204ENST00000409323 RBM38Q9H0Z9 239 aaKnown RBP12.16□□□□□ -0.46
CHRNA1-204ENST00000409323 FAM206AQ9NX38 181 aa12.16□□□□□ -0.46
CHRNA1-204ENST00000409323 EIF3KQ9UBQ5 218 aaKnown RBP12.16□□□□□ -0.46
CHRNA1-204ENST00000409323 ERGIC3Q9Y282 383 aa12.16□□□□□ -0.46
CHRNA1-204ENST00000409323 CAB39Q9Y376 341 aaPredicted RBP12.16□□□□□ -0.46
CHRNA1-204ENST00000409323 RNF115Q9Y4L5 304 aa12.16□□□□□ -0.46
CHRNA1-204ENST00000409323 SIRT4Q9Y6E7 314 aaPredicted RBP12.16□□□□□ -0.46
CHRNA1-204ENST00000409323 SULT1C4O75897 302 aa12.15□□□□□ -0.46
CHRNA1-204ENST00000409323 HSMCR30P0CW71 290 aa12.15□□□□□ -0.46
CHRNA1-204ENST00000409323 TTKP33981 857 aa12.15□□□□□ -0.46
CHRNA1-204ENST00000409323 UCP2P55851 309 aa12.15□□□□□ -0.46
CHRNA1-204ENST00000409323 EMX1Q04741 257 aaPredicted RBP12.15□□□□□ -0.46
CHRNA1-204ENST00000409323 C3orf36Q3SXR2 165 aa12.15□□□□□ -0.46
CHRNA1-204ENST00000409323 WDR38Q5JTN6 314 aa12.15□□□□□ -0.46
CHRNA1-204ENST00000409323 GLYATL3Q5SZD4 288 aa12.15□□□□□ -0.46
CHRNA1-204ENST00000409323 DRAM2Q6UX65 266 aa12.15□□□□□ -0.46
CHRNA1-204ENST00000409323 TMPRSS11AQ6ZMR5 421 aa12.15□□□□□ -0.46
CHRNA1-204ENST00000409323 PRSS45Q7RTY3 260 aa12.15□□□□□ -0.46
CHRNA1-204ENST00000409323 RDH10Q8IZV5 341 aa12.15□□□□□ -0.46
CHRNA1-204ENST00000409323 PRSS35Q8N3Z0 413 aa12.15□□□□□ -0.46
CHRNA1-204ENST00000409323 OR8B12Q8NGG6 310 aa12.15□□□□□ -0.46
CHRNA1-204ENST00000409323 LILRB1Q8NHL6 650 aaPredicted RBP12.15□□□□□ -0.46
CHRNA1-204ENST00000409323 DGCR14Q96DF8 476 aaKnown RBP12.15□□□□□ -0.46
CHRNA1-204ENST00000409323 PGAM5Q96HS1 289 aa12.15□□□□□ -0.46
CHRNA1-204ENST00000409323 CDCA4Q9BXL8 241 aa12.15□□□□□ -0.46
CHRNA1-204ENST00000409323 OR2J1Q9GZK6 312 aa12.15□□□□□ -0.46
CHRNA1-204ENST00000409323 ATPIF1Q9UII2 106 aa12.15□□□□□ -0.46
CHRNA1-204ENST00000409323 R4GMQ9 66 aa12.15□□□□□ -0.46
CHRNA1-204ENST00000409323 ZNF254O75437 659 aa12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 MT-ND5P03915 603 aa12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 NR4A1P22736 598 aa12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 THBS4P35443 961 aa12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 MPV17P39210 176 aa12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 KIR3DL2P43630 455 aa12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 WNT4P56705 351 aa12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 PPP1CBP62140 327 aa12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 ZNF829Q3KNS6 432 aaPredicted RBP12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 ALKBH6Q3KRA9 238 aa12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 TMEM255AQ5JRV8 349 aa12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 RNLSQ5VYX0 342 aa12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 DEGS2Q6QHC5 323 aa12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 ZNF704Q6ZNC4 412 aaPredicted RBP12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 KCTD8Q6ZWB6 473 aa12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 SSX8Q7RTT4 187 aa12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 SATL1Q86VE3 508 aa12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 COMMD2Q86X83 199 aa12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 SYS1Q8N2H4 156 aa12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 ZNF485Q8NCK3 441 aa12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 SLC25A40Q8TBP6 338 aa12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 MND1Q9BWT6 205 aa12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 PBOV1Q9GZY1 135 aa12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 MOV10Q9HCE1 1003 aaKnown RBP12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 G6PC2Q9NQR9 355 aa12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 KCNN3Q9UGI6 736 aa12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 OR52A1Q9UKL2 312 aa12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 LSM2Q9Y333 95 aaKnown RBP12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 SNX5Q9Y5X3 404 aa12.14□□□□□ -0.47
CHRNA1-204ENST00000409323 TMEM129A0AVI4 362 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 E7EQL1 145 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 TACSTD2P09758 323 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 FABP6P51161 128 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 GBX2P52951 348 aaPredicted RBP12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 ZNF92Q03936 586 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 DAZAP2Q15038 168 aaPredicted RBP12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 NEDD8Q15843 81 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 BCL2L15Q5TBC7 163 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 RHOUQ7L0Q8 258 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 TMEM200AQ86VY9 491 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 LRP11Q86VZ4 500 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 ZNF295-AS1Q8N0V1 137 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 IL17RDQ8NFM7 739 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms