RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 SHROOM3Q8TF72 1996 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 AQP7P3A6NL99 342 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 KDM4EB2RXH2 506 aaPredicted RBP5.31□□□□□ -1.56
HDAC9-203ENST00000406072 SCDO00767 359 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 XRCC2O43543 280 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 GSTZ1O43708 216 aaPredicted RBP5.31□□□□□ -1.56
HDAC9-203ENST00000406072 GPANK1O95872 356 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 TMEM225BP0DP42 221 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 ALOX5APP20292 161 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 TRHRP34981 398 aaPredicted RBP5.31□□□□□ -1.56
HDAC9-203ENST00000406072 TSFMP43897 325 aaKnown RBP5.31□□□□□ -1.56
HDAC9-203ENST00000406072 GABRA2P47869 451 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 SPINT3P49223 89 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 NOVA1P51513 510 aaKnown RBP5.31□□□□□ -1.56
HDAC9-203ENST00000406072 H2BFSP57053 126 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 CLDN2P57739 230 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 SLC35A1P78382 337 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 ARL6IP1Q15041 203 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 KIAA0040Q15053 153 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 AGERQ15109 404 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 DHCR24Q15392 516 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 TMEM268Q5VZI3 342 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 Q6ZN92 141 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 UBE3DQ7Z6J8 389 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 ZNF100Q8IYN0 542 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 DND1Q8IYX4 353 aaKnown RBP5.31□□□□□ -1.56
HDAC9-203ENST00000406072 RNF113BQ8IZP6 322 aaKnown RBP5.31□□□□□ -1.56
HDAC9-203ENST00000406072 CARFQ8N187 725 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 CBARPQ8N350 705 aaPredicted RBP5.31□□□□□ -1.56
HDAC9-203ENST00000406072 FAM181AQ8N9Y4 354 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 OR13D1Q8NGV5 346 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 M1APQ8TC57 530 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 SLC2A12Q8TD20 617 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 FAM3CQ92520 227 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 EDAQ92838 391 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 FOXJ1Q92949 421 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 PIK3IP1Q96FE7 263 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 ZNF845Q96IR2 970 aaPredicted RBP5.31□□□□□ -1.56
HDAC9-203ENST00000406072 LMAN1LQ9HAT1 526 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 PLEKHA2Q9HB19 425 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 PRSS16Q9NQE7 514 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 CMC2Q9NRP2 79 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 RCC2Q9P258 522 aaKnown RBP5.31□□□□□ -1.56
HDAC9-203ENST00000406072 MYOTQ9UBF9 498 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 A4GNTQ9UNA3 340 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 TNFSF18Q9UNG2 199 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 HCFC2Q9Y5Z7 792 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 SLCO1B1Q9Y6L6 691 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 MYO9BQ13459 2157 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 G3V3Q6 166 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 MASP2O00187 686 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 SDCBPO00560 298 aaPredicted RBP5.31□□□□□ -1.56
HDAC9-203ENST00000406072 TBX19O60806 448 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 F13BP05160 661 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 METTL15P1P0C7V9 234 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 HIST1H1BP16401 226 aaKnown RBP5.31□□□□□ -1.56
HDAC9-203ENST00000406072 GNB3P16520 340 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 GJA4P35212 333 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 IRS1P35568 1242 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 TAS2R46P59540 309 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 TAS2R30P59541 319 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 RPS18P62269 152 aaKnown RBP5.31□□□□□ -1.56
HDAC9-203ENST00000406072 ZNF92Q03936 586 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 TLE1Q04724 770 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 RAB32Q13637 225 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 CCINQ13939 588 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 ENDOGQ14249 297 aaKnown RBP5.31□□□□□ -1.56
HDAC9-203ENST00000406072 CDKN3Q16667 212 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 SLC36A2Q495M3 483 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 TMEM31Q5JXX7 168 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 FAM71E1Q6IPT2 247 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 ADGRE4PQ86SQ3 457 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 MMP21Q8N119 569 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 TRAM1L1Q8N609 369 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 OR51A4Q8NGJ6 313 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 OR5D14Q8NGL3 314 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 OR1E3Q8WZA6 343 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 CCDC74AQ96AQ1 378 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 RSPRY1Q96DX4 576 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 SDSLQ96GA7 329 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 FAM71F1Q96KD3 344 aaPredicted RBP5.31□□□□□ -1.56
HDAC9-203ENST00000406072 UBL7Q96S82 380 aaPredicted RBP5.31□□□□□ -1.56
HDAC9-203ENST00000406072 PARD6GQ9BYG4 376 aaPredicted RBP5.31□□□□□ -1.56
HDAC9-203ENST00000406072 TBL1XR1Q9BZK7 514 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 MSL2Q9HCI7 577 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 SLC52A3Q9NQ40 469 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 LANCL2Q9NS86 450 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 ZDHHC8Q9ULC8 765 aa5.31□□□□□ -1.56
HDAC9-203ENST00000406072 ZNF443Q9Y2A4 671 aaPredicted RBP5.31□□□□□ -1.56
HDAC9-203ENST00000406072 LSM2Q9Y333 95 aaKnown RBP5.31□□□□□ -1.56
HDAC9-203ENST00000406072 TRBV5-3A0A0A0MS03 114 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 TMEM269A0A1B0GVZ9 245 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 NPIPB15A6NHN6 443 aaPredicted RBP5.3□□□□□ -1.56
HDAC9-203ENST00000406072 EPOPA6NHQ4 379 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 H7C1C5 153 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 HMGN4O00479 90 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 CNOT4O95628 575 aaKnown RBP5.3□□□□□ -1.56
HDAC9-203ENST00000406072 VSIG10L2P0DP72 767 aa5.3□□□□□ -1.56
HDAC9-203ENST00000406072 MGST1P10620 155 aaKnown RBP5.3□□□□□ -1.56
HDAC9-203ENST00000406072 TPPP2P59282 170 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms