RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 CLPTM1LQ96KA5 538 aa11.3□□□□□ -0.6
VCX3A-202ENST00000398729 MEGF10Q96KG7 1140 aa11.3□□□□□ -0.6
VCX3A-202ENST00000398729 SIGLEC11Q96RL6 698 aa11.3□□□□□ -0.6
VCX3A-202ENST00000398729 SLC30A2Q9BRI3 323 aa11.3□□□□□ -0.6
VCX3A-202ENST00000398729 THTPAQ9BU02 230 aa11.3□□□□□ -0.6
VCX3A-202ENST00000398729 DGCR6LQ9BY27 220 aa11.3□□□□□ -0.6
VCX3A-202ENST00000398729 TMPRSS13Q9BYE2 586 aa11.3□□□□□ -0.6
VCX3A-202ENST00000398729 GCM1Q9NP62 436 aa11.3□□□□□ -0.6
VCX3A-202ENST00000398729 TMEM100Q9NV29 134 aa11.3□□□□□ -0.6
VCX3A-202ENST00000398729 LOC105371242A0A075B767 164 aa11.29□□□□□ -0.6
VCX3A-202ENST00000398729 A0A0A6YYJ9 748 aa11.29□□□□□ -0.6
VCX3A-202ENST00000398729 TMEM178BH3BS89 294 aa11.29□□□□□ -0.6
VCX3A-202ENST00000398729 M0R135 149 aa11.29□□□□□ -0.6
VCX3A-202ENST00000398729 SOX14O95416 240 aa11.29□□□□□ -0.6
VCX3A-202ENST00000398729 CST1P01037 141 aa11.29□□□□□ -0.6
VCX3A-202ENST00000398729 AVPP01185 164 aa11.29□□□□□ -0.6
VCX3A-202ENST00000398729 IFNGP01579 166 aa11.29□□□□□ -0.6
VCX3A-202ENST00000398729 FMO3P31513 532 aa11.29□□□□□ -0.6
VCX3A-202ENST00000398729 RPS27P42677 84 aaKnown RBP11.29□□□□□ -0.6
VCX3A-202ENST00000398729 SLC6A9P48067 706 aa11.29□□□□□ -0.6
VCX3A-202ENST00000398729 MMP16P51512 607 aa11.29□□□□□ -0.6
VCX3A-202ENST00000398729 SLC25A1P53007 311 aa11.29□□□□□ -0.6
VCX3A-202ENST00000398729 CRMP1Q14194 572 aa11.29□□□□□ -0.6
VCX3A-202ENST00000398729 GK2Q14410 553 aaPredicted RBP11.29□□□□□ -0.6
VCX3A-202ENST00000398729 ZMYND11Q15326 602 aa11.29□□□□□ -0.6
VCX3A-202ENST00000398729 C1orf229Q6ZS94 237 aaPredicted RBP11.29□□□□□ -0.6
VCX3A-202ENST00000398729 PGAP1Q75T13 922 aa11.29□□□□□ -0.6
VCX3A-202ENST00000398729 MRPL21Q7Z2W9 205 aaKnown RBP11.29□□□□□ -0.6
VCX3A-202ENST00000398729 LRRC28Q86X40 367 aaPredicted RBP11.29□□□□□ -0.6
VCX3A-202ENST00000398729 MUC20Q8N307 709 aaPredicted RBP11.29□□□□□ -0.6
VCX3A-202ENST00000398729 OR51L1Q8NGJ5 315 aa11.29□□□□□ -0.6
VCX3A-202ENST00000398729 OR4Q3Q8NH05 313 aa11.29□□□□□ -0.6
VCX3A-202ENST00000398729 TEX47Q8TBZ9 253 aa11.29□□□□□ -0.6
VCX3A-202ENST00000398729 ZNF799Q96GE5 643 aa11.29□□□□□ -0.6
VCX3A-202ENST00000398729 RBM4Q9BWF3 364 aaKnown RBP11.29□□□□□ -0.6
VCX3A-202ENST00000398729 CHID1Q9BWS9 393 aa11.29□□□□□ -0.6
VCX3A-202ENST00000398729 PATZ1Q9HBE1 687 aaKnown RBP11.29□□□□□ -0.6
VCX3A-202ENST00000398729 DDX28Q9NUL7 540 aaKnown RBP11.29□□□□□ -0.6
VCX3A-202ENST00000398729 ARMC1Q9NVT9 282 aa11.29□□□□□ -0.6
VCX3A-202ENST00000398729 COMMD3-BMI1R4GMX3 469 aa11.29□□□□□ -0.6
VCX3A-202ENST00000398729 PPIAL4EA0A075B759 164 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 PPIAL4CA0A0B4J2A2 164 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 AQP12BA6NM10 295 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 RIIAD1A6NNX1 92 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 PPIAL4DF5H284 164 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 H0YL77 283 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 ACOT8O14734 319 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 MLNRO43193 412 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 GYPBP06028 91 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 SPARCP09486 303 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 PPIAL4FP0DN26 164 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 ZNF3P17036 446 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 RBMXP38159 391 aaKnown RBP11.28□□□□□ -0.6
VCX3A-202ENST00000398729 MDH2P40926 338 aaKnown RBP11.28□□□□□ -0.6
VCX3A-202ENST00000398729 ENTPD1P49961 510 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 BLVRAP53004 296 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 LYPD4Q6UWN0 246 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 CD300LDQ6UXZ3 194 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 DCXRQ7Z4W1 244 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 C1QL2Q7Z5L3 287 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 AQP12AQ8IXF9 295 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 ADGRG5Q8IZF4 528 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 OR10S1Q8NGN2 331 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 OR6K6Q8NGW6 343 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 NANPQ8TBE9 248 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 ZNF418Q8TF45 676 aaPredicted RBP11.28□□□□□ -0.6
VCX3A-202ENST00000398729 GIPC3Q8TF64 312 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 SPRYD4Q8WW59 207 aaPredicted RBP11.28□□□□□ -0.6
VCX3A-202ENST00000398729 ZNRF4Q8WWF5 429 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 SLCO4A1Q96BD0 722 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 NIPSNAP1Q9BPW8 284 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 COPS4Q9BT78 406 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 C7orf69Q9H7B7 122 aa11.28□□□□□ -0.6
VCX3A-202ENST00000398729 A0A1B0GWJ7 208 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 DHRS12A0PJE2 317 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 ARRDC5A6NEK1 342 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 LRRC30A6NM36 301 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 F5H5P2 479 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 H3BN98 237 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 ZNF593O00488 134 aaPredicted RBP11.27□□□□□ -0.61
VCX3A-202ENST00000398729 GNGT2O14610 69 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 VENTXO95231 258 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 HLA-DPB1P04440 258 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 HOXB6P17509 224 aaKnown RBP11.27□□□□□ -0.61
VCX3A-202ENST00000398729 SPI1P17947 270 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 EPHA1P21709 976 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 OTX1P32242 354 aaPredicted RBP11.27□□□□□ -0.61
VCX3A-202ENST00000398729 PRSS12P56730 875 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 TAF13Q15543 124 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 PCK2Q16822 640 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 ZNF181Q2M3W8 571 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 DNAL1Q4LDG9 190 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 ESCO2Q56NI9 601 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 DRAM2Q6UX65 266 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 C12orf54Q6X4T0 127 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 TRPM8Q7Z2W7 1104 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 MOGAT3Q86VF5 341 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 C1orf87Q8N0U7 546 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 ZNF511Q8NB15 262 aa11.27□□□□□ -0.61
VCX3A-202ENST00000398729 ZNF420Q8TAQ5 688 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms