RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 MTNR1BP49286 362 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 CNN1P51911 297 aaKnown RBP2.48□□□□□ -2.01
CHD9-202ENST00000398510 HYAL2Q12891 473 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 ZNF77Q15935 545 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.48□□□□□ -2.01
CHD9-202ENST00000398510 TMEM176BQ3YBM2 270 aaPredicted RBP2.48□□□□□ -2.01
CHD9-202ENST00000398510 ZNF260Q3ZCT1 412 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 SUSD1Q6UWL2 747 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 DPPA3Q6W0C5 159 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 ERASQ7Z444 233 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 CEACAM19Q7Z692 300 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 NOXO1Q8NFA2 376 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 BPIFCQ8NFQ6 507 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 OR4S2Q8NH73 311 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 NMNAT1Q9HAN9 279 aaPredicted RBP2.48□□□□□ -2.01
CHD9-202ENST00000398510 PLCXD1Q9NUJ7 323 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 SIRT5Q9NXA8 310 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 OR14J1Q9UGF5 321 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 ANKUB1A6NFN9 424 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 ADAM10O14672 748 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 NUPL2O15504 423 aaKnown RBP2.48□□□□□ -2.01
CHD9-202ENST00000398510 RBP4P02753 201 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 PF4P02776 101 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 OR4Q2P0C623 313 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 OR5AC1P0C628 307 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 LIMS3P0CW19 117 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 LIMS4P0CW20 117 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 GLRA1P23415 457 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 EDDM3BP56851 147 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 RAC3P60763 192 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 RELQ04864 619 aaPredicted RBP2.48□□□□□ -2.01
CHD9-202ENST00000398510 NRN1LQ496H8 165 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 C18orf63Q68DL7 685 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 RPL7L1Q6DKI1 246 aaKnown RBP2.48□□□□□ -2.01
CHD9-202ENST00000398510 IGDCC3Q8IVU1 814 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 CLIP4Q8N3C7 705 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 ARL6IP6Q8N6S5 226 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 LSM14AQ8ND56 463 aaKnown RBP2.48□□□□□ -2.01
CHD9-202ENST00000398510 ASB10Q8WXI3 467 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 TSLPQ969D9 159 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 ADAM19Q9H013 955 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 ABCG5Q9H222 651 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 IFT22Q9H7X7 185 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 FBXO8Q9NRD0 319 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 A3GALT2U3KPV4 340 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 V9GY05 133 aa2.48□□□□□ -2.01
CHD9-202ENST00000398510 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.47□□□□□ -2.01
CHD9-202ENST00000398510 ARNTLO00327 626 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 ARPC1BO15143 372 aaKnown RBP2.47□□□□□ -2.01
CHD9-202ENST00000398510 MPSTP25325 297 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 HOXA11P31270 313 aaPredicted RBP2.47□□□□□ -2.01
CHD9-202ENST00000398510 GABRA2P47869 451 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 HERVK_113P61574 105 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 JAG1P78504 1218 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 C19orf57Q0VDD7 668 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 CDK5R2Q13319 367 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 EXOSC2Q13868 293 aaKnown RBP2.47□□□□□ -2.01
CHD9-202ENST00000398510 Q6ZN92 141 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 SYT9Q86SS6 491 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 METTL4Q8N3J2 472 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 ARRDC1Q8N5I2 433 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 CLDN19Q8N6F1 224 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 RNF148Q8N7C7 305 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 C4orf32Q8N8J7 132 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 REEP6Q96HR9 211 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 RHNO1Q9BSD3 238 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 SGPP1Q9BX95 441 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 OR51B5Q9H339 312 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 OCEL1Q9H607 264 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 POLD4Q9HCU8 107 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 SLC45A2Q9UMX9 530 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 SLC17A4Q9Y2C5 497 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 ABCA2Q9BZC7 2435 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 M0R1B8 84 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 PLPP1O14494 284 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 BUD23O43709 281 aaKnown RBP2.47□□□□□ -2.01
CHD9-202ENST00000398510 MAS1P04201 325 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 LIM2P55344 173 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 HNRNPA0Q13151 305 aaKnown RBP2.47□□□□□ -2.01
CHD9-202ENST00000398510 HLA-BQ31612 363 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 LEXMQ3ZCV2 418 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 TRMT12Q53H54 448 aaKnown RBP2.47□□□□□ -2.01
CHD9-202ENST00000398510 KHDC3LQ587J8 217 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 RANBP10Q6VN20 620 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 LIAT1Q6ZQX7 453 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 LILRA2Q8N149 483 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 GLIS3Q8NEA6 775 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 ABHD4Q8TB40 342 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 ST8SIA4Q92187 359 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 FGF14Q92915 247 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 CCDC74AQ96AQ1 378 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 ARRDC3Q96B67 414 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 RASL11BQ9BPW5 248 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 ANKRD60Q9BZ19 345 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 TREX1Q9NSU2 369 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 PIPOXQ9P0Z9 390 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.47□□□□□ -2.01
CHD9-202ENST00000398510 DSCAMO60469 2012 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 A0A0B4J293 547 aa2.47□□□□□ -2.01
CHD9-202ENST00000398510 SPTY2D1-AS1A0A0U1RR47 76 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms