RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 OR13G1Q8NGZ3 307 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 STMN2Q93045 179 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 ITFG2Q969R8 447 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 ELMOD3Q96FG2 381 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 ZNF582Q96NG8 517 aaPredicted RBP12.16□□□□□ -0.46
HDDC2-202ENST00000398153 MNTQ99583 582 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 SAP30LQ9HAJ7 183 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 HAO2Q9NYQ3 351 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 IGHV1-69-2A0A0G2JMI3 117 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 A0A1B0GWJ7 208 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 IQCF6A8MYZ5 107 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 TPD52L2O43399 206 aaKnown RBP12.15□□□□□ -0.46
HDDC2-202ENST00000398153 XRCC2O43543 280 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 PRKYO43930 277 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 NCR1O76036 304 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 PSKH1P11801 424 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 EPHA2P29317 976 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 OPRL1P41146 370 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 CDC42P60953 191 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 GABPB1Q06547 395 aaPredicted RBP12.15□□□□□ -0.46
HDDC2-202ENST00000398153 SLC3A1Q07837 685 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 TMED1Q13445 227 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 GK2Q14410 553 aaPredicted RBP12.15□□□□□ -0.46
HDDC2-202ENST00000398153 HFEQ30201 348 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 TMEM255AQ5JRV8 349 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 AADACL4Q5VUY2 407 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 KCTD18Q6PI47 426 aaPredicted RBP12.15□□□□□ -0.46
HDDC2-202ENST00000398153 PGAP1Q75T13 922 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 MEPCEQ7L2J0 689 aaKnown RBP12.15□□□□□ -0.46
HDDC2-202ENST00000398153 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.15□□□□□ -0.46
HDDC2-202ENST00000398153 TCEANCQ8N8B7 351 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 OR52H1Q8NGJ2 320 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 HPS1Q92902 700 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 HRASLS5Q96KN8 279 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 SMR3AQ99954 134 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 BPESC1Q9GZL8 116 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 SLC22A4Q9H015 551 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 POFUT1Q9H488 388 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 GSX1Q9H4S2 264 aaPredicted RBP12.15□□□□□ -0.46
HDDC2-202ENST00000398153 PTTG3PQ9NZH4 202 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 IL19Q9UHD0 177 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 LAMP5Q9UJQ1 280 aa12.15□□□□□ -0.46
HDDC2-202ENST00000398153 NOP16Q9Y3C1 178 aaKnown RBP12.15□□□□□ -0.46
HDDC2-202ENST00000398153 CR1P17927 2039 aa12.15□□□□□ -0.47
HDDC2-202ENST00000398153 ZSCAN5BA6NJL1 495 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 EI24O14681 340 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 PHYHO14832 338 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 SPRY3O43610 288 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 CD5LO43866 347 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 RP2O75695 350 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 H2BFMP0C1H6 154 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 ALOX5APP20292 161 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 CFL1P23528 166 aaKnown RBP12.14□□□□□ -0.47
HDDC2-202ENST00000398153 COL8A2P25067 703 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 DCTDP32321 178 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 CHN2P52757 468 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 RIPPLY3P57055 190 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 POU4F2Q12837 409 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 HLXQ14774 488 aaPredicted RBP12.14□□□□□ -0.47
HDDC2-202ENST00000398153 TMEM249Q2WGJ8 235 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 NAA40Q86UY6 237 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 ZNF283Q8N7M2 679 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 BBS1Q8NFJ9 593 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 THEM6Q8WUY1 208 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 ASB17Q8WXJ9 295 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 RFKQ969G6 155 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 SPSB4Q96A44 273 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 SLC30A2Q9BRI3 323 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 REPIN1Q9BWE0 567 aaKnown RBP12.14□□□□□ -0.47
HDDC2-202ENST00000398153 RIBC2Q9H4K1 309 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 RGCCQ9H4X1 137 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 MSL2Q9HCI7 577 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 WARS2Q9UGM6 360 aaKnown RBP12.14□□□□□ -0.47
HDDC2-202ENST00000398153 ZNF391Q9UJN7 358 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 MTORP42345 2549 aa12.14□□□□□ -0.47
HDDC2-202ENST00000398153 NIPBLQ6KC79 2804 aaeCLIP12.13□□□□□ -0.479e-8■□□□□ 8.9
HDDC2-202ENST00000398153 CCDC182A6NF36 153 aa12.13□□□□□ -0.47
HDDC2-202ENST00000398153 ACOD1A6NK06 481 aa12.13□□□□□ -0.47
HDDC2-202ENST00000398153 IFNL4K9M1U5 179 aa12.13□□□□□ -0.47
HDDC2-202ENST00000398153 SELENOFO60613 162 aa12.13□□□□□ -0.47
HDDC2-202ENST00000398153 ZNF254O75437 659 aa12.13□□□□□ -0.47
HDDC2-202ENST00000398153 DDOSTP39656 456 aa12.13□□□□□ -0.47
HDDC2-202ENST00000398153 GPR6P46095 362 aaPredicted RBP12.13□□□□□ -0.47
HDDC2-202ENST00000398153 CX3CR1P49238 355 aa12.13□□□□□ -0.47
HDDC2-202ENST00000398153 GZMKP49863 264 aa12.13□□□□□ -0.47
HDDC2-202ENST00000398153 PRKXP51817 358 aa12.13□□□□□ -0.47
HDDC2-202ENST00000398153 TNFAIP6P98066 277 aaPredicted RBP12.13□□□□□ -0.47
HDDC2-202ENST00000398153 TSTQ16762 297 aaKnown RBP12.13□□□□□ -0.47
HDDC2-202ENST00000398153 SLC25A30Q5SVS4 291 aa12.13□□□□□ -0.47
HDDC2-202ENST00000398153 OR2T2Q6IF00 324 aa12.13□□□□□ -0.47
HDDC2-202ENST00000398153 ZBTB49Q6ZSB9 765 aa12.13□□□□□ -0.47
HDDC2-202ENST00000398153 USP51Q70EK9 711 aa12.13□□□□□ -0.47
HDDC2-202ENST00000398153 MRPL21Q7Z2W9 205 aaKnown RBP12.13□□□□□ -0.47
HDDC2-202ENST00000398153 CBR4Q8N4T8 237 aa12.13□□□□□ -0.47
HDDC2-202ENST00000398153 EME1Q96AY2 570 aa12.13□□□□□ -0.47
HDDC2-202ENST00000398153 IL4I1Q96RQ9 567 aa12.13□□□□□ -0.47
HDDC2-202ENST00000398153 CNN2Q99439 309 aaKnown RBP12.13□□□□□ -0.47
HDDC2-202ENST00000398153 MROQ9BYG7 248 aa12.13□□□□□ -0.47
HDDC2-202ENST00000398153 C8orf4Q9NR00 106 aa12.13□□□□□ -0.47
HDDC2-202ENST00000398153 ZNF275Q9NSD4 429 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms