RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 V9GY05 133 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 ALPK2Q86TB3 2170 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 A0A0B4J203 849 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 CTDSPLO15194 276 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 LYRM1O43325 122 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 TRAPPC2P0DI81 140 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 TRAPPC2BP0DI82 140 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 PGA4P0DJD7 388 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 PGA3P0DJD8 388 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 CALCBP10092 127 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 NTF4P34130 210 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 MAGEB1P43366 347 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 CSNK1A1P48729 337 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 RIDAP52758 137 aaKnown RBP13.1□□□□□ -0.31
CAPN3-207ENST00000397200 SCAND1P57086 179 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 FOXF2Q12947 444 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 EIF2B1Q14232 305 aaKnown RBP13.1□□□□□ -0.31
CAPN3-207ENST00000397200 MZT2BQ6NZ67 158 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 NUFIP2Q7Z417 695 aaKnown RBP13.1□□□□□ -0.31
CAPN3-207ENST00000397200 CATSPERDQ86XM0 798 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 ZNF100Q8IYN0 542 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 TMEM123Q8N131 208 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 ZNF676Q8N7Q3 588 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 NOXO1Q8NFA2 376 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 OR6K3Q8NGY3 331 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 OR6N1Q8NGY5 312 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 RFT1Q96AA3 541 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 APH1AQ96BI3 265 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 ORAI1Q96D31 301 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 DMRTA2Q96SC8 542 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 ABHD1Q96SE0 405 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 SLITRK2Q9H156 845 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 C12orf49Q9H741 205 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 BRD7Q9NPI1 651 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 LRP12Q9Y561 859 aa13.1□□□□□ -0.31
CAPN3-207ENST00000397200 POLEQ07864 2286 aa13.09□□□□□ -0.31
CAPN3-207ENST00000397200 SMG1Q96Q15 3661 aaKnown RBP13.09□□□□□ -0.31
CAPN3-207ENST00000397200 CCL21O00585 134 aa13.09□□□□□ -0.31
CAPN3-207ENST00000397200 GSTZ1O43708 216 aaPredicted RBP13.09□□□□□ -0.31
CAPN3-207ENST00000397200 MPZL1O95297 269 aa13.09□□□□□ -0.31
CAPN3-207ENST00000397200 PNPP00491 289 aa13.09□□□□□ -0.31
CAPN3-207ENST00000397200 NR2C1P13056 603 aa13.09□□□□□ -0.31
CAPN3-207ENST00000397200 KIR2DL2P43627 348 aaPredicted RBP13.09□□□□□ -0.31
CAPN3-207ENST00000397200 MMP15P51511 669 aa13.09□□□□□ -0.31
CAPN3-207ENST00000397200 THEM4Q5T1C6 240 aa13.09□□□□□ -0.31
CAPN3-207ENST00000397200 ZNF544Q6NX49 715 aa13.09□□□□□ -0.31
CAPN3-207ENST00000397200 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.09□□□□□ -0.31
CAPN3-207ENST00000397200 GLB1L2Q8IW92 636 aa13.09□□□□□ -0.31
CAPN3-207ENST00000397200 NAXEQ8NCW5 288 aa13.09□□□□□ -0.31
CAPN3-207ENST00000397200 OR10AC1Q8NH08 325 aa13.09□□□□□ -0.31
CAPN3-207ENST00000397200 SLC25A38Q96DW6 304 aa13.09□□□□□ -0.31
CAPN3-207ENST00000397200 ETV7Q9Y603 341 aa13.09□□□□□ -0.31
CAPN3-207ENST00000397200 CFAP46Q8IYW2 2715 aa13.08□□□□□ -0.32
CAPN3-207ENST00000397200 LINC00854A0A1B0GVQ3 168 aa13.08□□□□□ -0.32
CAPN3-207ENST00000397200 OR6C65A6NJZ3 312 aa13.08□□□□□ -0.32
CAPN3-207ENST00000397200 ZNF823P16415 610 aa13.08□□□□□ -0.32
CAPN3-207ENST00000397200 GNLYP22749 145 aa13.08□□□□□ -0.32
CAPN3-207ENST00000397200 CTSSP25774 331 aa13.08□□□□□ -0.32
CAPN3-207ENST00000397200 TPTEP56180 551 aa13.08□□□□□ -0.32
CAPN3-207ENST00000397200 PITPNAQ00169 270 aa13.08□□□□□ -0.32
CAPN3-207ENST00000397200 MFGE8Q08431 387 aaPredicted RBP13.08□□□□□ -0.32
CAPN3-207ENST00000397200 HIST3H3Q16695 136 aa13.08□□□□□ -0.32
CAPN3-207ENST00000397200 OTPQ5XKR4 325 aa13.08□□□□□ -0.32
CAPN3-207ENST00000397200 VWA1Q6PCB0 445 aa13.08□□□□□ -0.32
CAPN3-207ENST00000397200 NCCRP1Q6ZVX7 275 aaPredicted RBP13.08□□□□□ -0.32
CAPN3-207ENST00000397200 KRT77Q7Z794 578 aa13.08□□□□□ -0.32
CAPN3-207ENST00000397200 C20orf196Q8IYI0 205 aa13.08□□□□□ -0.32
CAPN3-207ENST00000397200 OR51A4Q8NGJ6 313 aa13.08□□□□□ -0.32
CAPN3-207ENST00000397200 PRR7Q8TB68 274 aa13.08□□□□□ -0.32
CAPN3-207ENST00000397200 ENKURQ8TC29 256 aa13.08□□□□□ -0.32
CAPN3-207ENST00000397200 RNF133Q8WVZ7 376 aa13.08□□□□□ -0.32
CAPN3-207ENST00000397200 RND1Q92730 232 aa13.08□□□□□ -0.32
CAPN3-207ENST00000397200 TMEM54Q969K7 222 aa13.08□□□□□ -0.32
CAPN3-207ENST00000397200 RBP7Q96R05 134 aa13.08□□□□□ -0.32
CAPN3-207ENST00000397200 THAP7Q9BT49 309 aaPredicted RBP13.08□□□□□ -0.32
CAPN3-207ENST00000397200 SFXN3Q9BWM7 321 aa13.08□□□□□ -0.32
CAPN3-207ENST00000397200 SLCO5A1Q9H2Y9 848 aa13.08□□□□□ -0.32
CAPN3-207ENST00000397200 RNF121Q9H920 327 aa13.08□□□□□ -0.32
CAPN3-207ENST00000397200 TCF7L1Q9HCS4 588 aa13.08□□□□□ -0.32
CAPN3-207ENST00000397200 GLTPQ9NZD2 209 aa13.08□□□□□ -0.32
CAPN3-207ENST00000397200 R4GMQ9 66 aa13.08□□□□□ -0.32
CAPN3-207ENST00000397200 TRAV8-7A0A075B6U6 113 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 A0A0B4J293 547 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 A0A0G2JNJ9 132 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 A0A1B0GUH1 482 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 MEIOCA2RUB1 952 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 LANCL1O43813 399 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 TNFSF13O75888 250 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 KRT33AO76009 404 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 ISG15P05161 165 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 CD37P11049 281 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 DCTDP32321 178 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 MNDAP41218 407 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 OR3A2P47893 321 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 UQCRFS1P47985 274 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 SOX2P48431 317 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 OR7E24Q6IFN5 339 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 FJX1Q86VR8 437 aa13.07□□□□□ -0.32
CAPN3-207ENST00000397200 INTS1Q8N201 2190 aaKnown RBP13.07□□□□□ -0.32
CAPN3-207ENST00000397200 GPR137CQ8N3F9 429 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms